RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 UFL1O94874 794 aa17.26■□□□□ 0.35
HERPUD1-203ENST00000379792 MPNDQ8N594 471 aa17.26■□□□□ 0.35
HERPUD1-203ENST00000379792 PI4K2BQ8TCG2 481 aa17.26■□□□□ 0.35
HERPUD1-203ENST00000379792 GPATCH3Q96I76 525 aa17.26■□□□□ 0.35
HERPUD1-203ENST00000379792 POLLQ9UGP5 575 aa17.26■□□□□ 0.35
HERPUD1-203ENST00000379792 GGA1Q9UJY5 639 aa17.26■□□□□ 0.35
HERPUD1-203ENST00000379792 CACNA1SQ13698 1873 aa17.26■□□□□ 0.35
HERPUD1-203ENST00000379792 C6orf229H3BNL8 230 aa17.25■□□□□ 0.35
HERPUD1-203ENST00000379792 MAP4K4O95819 1239 aaPredicted RBP17.25■□□□□ 0.35
HERPUD1-203ENST00000379792 PHKA1P46020 1223 aa17.25■□□□□ 0.35
HERPUD1-203ENST00000379792 GYG1P46976 350 aa17.25■□□□□ 0.35
HERPUD1-203ENST00000379792 BCAMP50895 628 aa17.25■□□□□ 0.35
HERPUD1-203ENST00000379792 TXNRD3Q86VQ6 643 aa17.25■□□□□ 0.35
HERPUD1-203ENST00000379792 OSBPL3Q9H4L5 887 aa17.25■□□□□ 0.35
HERPUD1-203ENST00000379792 LEMD3Q9Y2U8 911 aa17.25■□□□□ 0.35
HERPUD1-203ENST00000379792 GSPT1P15170 499 aaKnown RBP17.25■□□□□ 0.35
HERPUD1-203ENST00000379792 DALRD3Q5D0E6 543 aaKnown RBP17.25■□□□□ 0.35
HERPUD1-203ENST00000379792 TTC22Q5TAA0 569 aa17.25■□□□□ 0.35
HERPUD1-203ENST00000379792 DPP8Q6V1X1 898 aaPredicted RBP17.25■□□□□ 0.35
HERPUD1-203ENST00000379792 TBC1D16Q8TBP0 767 aa17.25■□□□□ 0.35
HERPUD1-203ENST00000379792 BOLA2Q9H3K6 86 aa17.25■□□□□ 0.35
HERPUD1-203ENST00000379792 PODXL2Q9NZ53 605 aa17.25■□□□□ 0.35
HERPUD1-203ENST00000379792 TTC41PQ6P2S7 1318 aa17.25■□□□□ 0.35
HERPUD1-203ENST00000379792 ATP2B4P23634 1241 aa17.24■□□□□ 0.35
HERPUD1-203ENST00000379792 CCDC158Q5M9N0 1113 aa17.24■□□□□ 0.35
HERPUD1-203ENST00000379792 TTC39AQ5SRH9 613 aa17.24■□□□□ 0.35
HERPUD1-203ENST00000379792 CCDC102BQ68D86 513 aa17.24■□□□□ 0.35
HERPUD1-203ENST00000379792 NDUFB9Q9Y6M9 179 aa17.24■□□□□ 0.35
HERPUD1-203ENST00000379792 A0A1B0GUL6 1792 aa17.23■□□□□ 0.35
HERPUD1-203ENST00000379792 BRCA1P38398 1863 aaKnown RBP17.23■□□□□ 0.35
HERPUD1-203ENST00000379792 FAM84BQ96KN1 310 aaPredicted RBP17.23■□□□□ 0.35
HERPUD1-203ENST00000379792 BCS1LQ9Y276 419 aa17.23■□□□□ 0.35
HERPUD1-203ENST00000379792 DLEC1Q9Y238 1755 aa17.23■□□□□ 0.35
HERPUD1-203ENST00000379792 ERC2O15083 957 aa17.23■□□□□ 0.35
HERPUD1-203ENST00000379792 GLRX3O76003 335 aaKnown RBP17.23■□□□□ 0.35
HERPUD1-203ENST00000379792 ATP5JP18859 108 aa17.23■□□□□ 0.35
HERPUD1-203ENST00000379792 SCARF1Q14162 830 aa17.23■□□□□ 0.35
HERPUD1-203ENST00000379792 SNRKQ9NRH2 765 aa17.23■□□□□ 0.35
HERPUD1-203ENST00000379792 IQSEC3Q9UPP2 1182 aaPredicted RBP17.23■□□□□ 0.35
HERPUD1-203ENST00000379792 AOX1Q06278 1338 aa17.22■□□□□ 0.35
HERPUD1-203ENST00000379792 LRRC37AA6NMS7 1700 aa17.22■□□□□ 0.35
HERPUD1-203ENST00000379792 RIMBP2O15034 1052 aa17.22■□□□□ 0.35
HERPUD1-203ENST00000379792 IRS2Q9Y4H2 1338 aa17.22■□□□□ 0.35
HERPUD1-203ENST00000379792 CAVIN4Q5BKX8 364 aa17.21■□□□□ 0.35
HERPUD1-203ENST00000379792 VPS37DQ86XT2 251 aa17.21■□□□□ 0.35
HERPUD1-203ENST00000379792 EDC3Q96F86 508 aaKnown RBP17.21■□□□□ 0.35
HERPUD1-203ENST00000379792 TRIM6-TRIM34B2RNG4 842 aa17.2■□□□□ 0.34
HERPUD1-203ENST00000379792 SDSP20132 328 aa17.2■□□□□ 0.34
HERPUD1-203ENST00000379792 CCDC93Q567U6 631 aa17.2■□□□□ 0.34
HERPUD1-203ENST00000379792 CC2D2BQ6DHV5 1058 aa17.2■□□□□ 0.34
HERPUD1-203ENST00000379792 PI16Q6UXB8 463 aa17.2■□□□□ 0.34
HERPUD1-203ENST00000379792 FBXO33Q7Z6M2 555 aa17.2■□□□□ 0.34
HERPUD1-203ENST00000379792 DNAJC2Q99543 621 aaKnown RBP17.2■□□□□ 0.34
HERPUD1-203ENST00000379792 HIBADHP31937 336 aaKnown RBP17.2■□□□□ 0.34
HERPUD1-203ENST00000379792 BMP2KLQ5H9B9 411 aa17.2■□□□□ 0.34
HERPUD1-203ENST00000379792 RILPL2Q969X0 211 aa17.2■□□□□ 0.34
HERPUD1-203ENST00000379792 MCAMP43121 646 aa17.19■□□□□ 0.34
HERPUD1-203ENST00000379792 FKBP4Q02790 459 aaKnown RBP eCLIP17.19■□□□□ 0.34
HERPUD1-203ENST00000379792 HAUS7Q99871 368 aa17.19■□□□□ 0.34
HERPUD1-203ENST00000379792 DUOX1Q9NRD9 1551 aa17.19■□□□□ 0.34
HERPUD1-203ENST00000379792 ARFGEF1Q9Y6D6 1849 aa17.18■□□□□ 0.34
HERPUD1-203ENST00000379792 UQCRFS1P1P0C7P4 283 aa17.18■□□□□ 0.34
HERPUD1-203ENST00000379792 ARID4AP29374 1257 aaPredicted RBP17.18■□□□□ 0.34
HERPUD1-203ENST00000379792 RASGRF1Q13972 1273 aa17.18■□□□□ 0.34
HERPUD1-203ENST00000379792 WASHC4Q2M389 1173 aa17.18■□□□□ 0.34
HERPUD1-203ENST00000379792 ZC3H12CQ9C0D7 883 aaKnown RBP17.18■□□□□ 0.34
HERPUD1-203ENST00000379792 LTBP1Q14766 1721 aa17.18■□□□□ 0.34
HERPUD1-203ENST00000379792 ZAP70P43403 619 aa17.17■□□□□ 0.34
HERPUD1-203ENST00000379792 DOK7Q18PE1 504 aa17.17■□□□□ 0.34
HERPUD1-203ENST00000379792 C15orf52Q6ZUT6 534 aaKnown RBP17.17■□□□□ 0.34
HERPUD1-203ENST00000379792 RTKN2Q8IZC4 609 aa17.17■□□□□ 0.34
HERPUD1-203ENST00000379792 ZNF512BQ96KM6 892 aaPredicted RBP17.17■□□□□ 0.34
HERPUD1-203ENST00000379792 RTFDC1Q9BY42 306 aaPredicted RBP17.17■□□□□ 0.34
HERPUD1-203ENST00000379792 GNL3LQ9NVN8 582 aaKnown RBP17.17■□□□□ 0.34
HERPUD1-203ENST00000379792 HMG20BQ9P0W2 317 aa17.17■□□□□ 0.34
HERPUD1-203ENST00000379792 SNED1Q8TER0 1413 aa17.17■□□□□ 0.34
HERPUD1-203ENST00000379792 ARAP2Q8WZ64 1704 aa17.17■□□□□ 0.34
HERPUD1-203ENST00000379792 GOLIM4O00461 696 aa17.17■□□□□ 0.34
HERPUD1-203ENST00000379792 ZNF804AQ7Z570 1209 aa17.17■□□□□ 0.34
HERPUD1-203ENST00000379792 ANTXR1Q9H6X2 564 aa17.17■□□□□ 0.34
HERPUD1-203ENST00000379792 MED23Q9ULK4 1368 aa17.16■□□□□ 0.34
HERPUD1-203ENST00000379792 FRAT2O75474 233 aaPredicted RBP17.16■□□□□ 0.34
HERPUD1-203ENST00000379792 AOC3Q16853 763 aa17.16■□□□□ 0.34
HERPUD1-203ENST00000379792 SOGA3Q5TF21 947 aa17.16■□□□□ 0.34
HERPUD1-203ENST00000379792 SPATA5Q8NB90 893 aa17.16■□□□□ 0.34
HERPUD1-203ENST00000379792 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.16■□□□□ 0.34
HERPUD1-203ENST00000379792 EYA3Q99504 573 aa17.16■□□□□ 0.34
HERPUD1-203ENST00000379792 JAG2Q9Y219 1238 aa17.16■□□□□ 0.34
HERPUD1-203ENST00000379792 ZNF277Q9NRM2 450 aaPredicted RBP17.15■□□□□ 0.34
HERPUD1-203ENST00000379792 PAG1Q9NWQ8 432 aa17.15■□□□□ 0.34
HERPUD1-203ENST00000379792 CHAF1AQ13111 956 aaPredicted RBP17.15■□□□□ 0.34
HERPUD1-203ENST00000379792 TBC1D9Q6ZT07 1266 aa17.15■□□□□ 0.34
HERPUD1-203ENST00000379792 CNTROBQ8N137 903 aa17.15■□□□□ 0.34
HERPUD1-203ENST00000379792 CD209Q9NNX6 404 aa17.15■□□□□ 0.34
HERPUD1-203ENST00000379792 G3V3G9 751 aa17.14■□□□□ 0.33
HERPUD1-203ENST00000379792 CYP2E1P05181 493 aaPredicted RBP17.14■□□□□ 0.33
HERPUD1-203ENST00000379792 GRIPAP1Q4V328 841 aa17.14■□□□□ 0.33
HERPUD1-203ENST00000379792 DCAF8Q5TAQ9 597 aa17.14■□□□□ 0.33
HERPUD1-203ENST00000379792 ZNF784Q8NCA9 323 aaPredicted RBP17.14■□□□□ 0.33
HERPUD1-203ENST00000379792 SUPT20HQ8NEM7 779 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms