RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 UBE2HP62256 183 aa22.81■■□□□ 1.24
PCDHA4-201ENST00000378125 PUS7LQ9H0K6 701 aaKnown RBP22.81■■□□□ 1.24
PCDHA4-201ENST00000378125 DHX32Q7L7V1 743 aaKnown RBP22.8■■□□□ 1.24
PCDHA4-201ENST00000378125 NUP98P52948 1817 aa22.8■■□□□ 1.24
PCDHA4-201ENST00000378125 PDE8AO60658 829 aa22.8■■□□□ 1.24
PCDHA4-201ENST00000378125 SCRN1Q12765 414 aa22.8■■□□□ 1.24
PCDHA4-201ENST00000378125 SNAP23O00161 211 aa22.79■■□□□ 1.24
PCDHA4-201ENST00000378125 CRKLP46109 303 aaKnown RBP22.79■■□□□ 1.24
PCDHA4-201ENST00000378125 CCT2P78371 535 aaKnown RBP22.79■■□□□ 1.24
PCDHA4-201ENST00000378125 SUSD4Q5VX71 490 aa22.79■■□□□ 1.24
PCDHA4-201ENST00000378125 INTS5Q6P9B9 1019 aaKnown RBP22.79■■□□□ 1.24
PCDHA4-201ENST00000378125 TSPY26PQ9H489 355 aa22.79■■□□□ 1.24
PCDHA4-201ENST00000378125 AHDC1Q5TGY3 1603 aaPredicted RBP22.79■■□□□ 1.24
PCDHA4-201ENST00000378125 PDCP20941 246 aa22.79■■□□□ 1.24
PCDHA4-201ENST00000378125 ZNF34Q8IZ26 560 aa22.79■■□□□ 1.24
PCDHA4-201ENST00000378125 PPP1R9BQ96SB3 815 aa22.79■■□□□ 1.24
PCDHA4-201ENST00000378125 TFIP11Q9UBB9 837 aaKnown RBP22.79■■□□□ 1.24
PCDHA4-201ENST00000378125 PLCH1Q4KWH8 1693 aa22.78■■□□□ 1.24
PCDHA4-201ENST00000378125 LAMA4Q16363 1823 aa22.78■■□□□ 1.24
PCDHA4-201ENST00000378125 ESPNB1AK53 854 aa22.77■■□□□ 1.24
PCDHA4-201ENST00000378125 ERVV-1B6SEH8 477 aa22.77■■□□□ 1.24
PCDHA4-201ENST00000378125 FOXP2O15409 715 aa22.77■■□□□ 1.24
PCDHA4-201ENST00000378125 CCDC87Q9NVE4 849 aa22.77■■□□□ 1.24
PCDHA4-201ENST00000378125 COL22A1Q8NFW1 1626 aaPredicted RBP22.77■■□□□ 1.24
PCDHA4-201ENST00000378125 KCNQ2O43526 872 aa22.77■■□□□ 1.24
PCDHA4-201ENST00000378125 EIF5P55010 431 aaKnown RBP22.77■■□□□ 1.24
PCDHA4-201ENST00000378125 ITPK1Q13572 414 aa22.77■■□□□ 1.24
PCDHA4-201ENST00000378125 NCOA5Q9HCD5 579 aaKnown RBP22.77■■□□□ 1.24
PCDHA4-201ENST00000378125 SLIT2O94813 1529 aa22.76■■□□□ 1.23
PCDHA4-201ENST00000378125 LOC102724428A0A0B4J2F2 783 aa22.76■■□□□ 1.23
PCDHA4-201ENST00000378125 SIK1P57059 783 aa22.76■■□□□ 1.23
PCDHA4-201ENST00000378125 VGLL2Q8N8G2 317 aa22.76■■□□□ 1.23
PCDHA4-201ENST00000378125 GPHNQ9NQX3 736 aaPredicted RBP22.76■■□□□ 1.23
PCDHA4-201ENST00000378125 PDE8BO95263 885 aa22.76■■□□□ 1.23
PCDHA4-201ENST00000378125 HMGB1P09429 215 aaKnown RBP22.76■■□□□ 1.23
PCDHA4-201ENST00000378125 PHKA1P46020 1223 aa22.76■■□□□ 1.23
PCDHA4-201ENST00000378125 EXOSC10Q01780 885 aaKnown RBP22.76■■□□□ 1.23
PCDHA4-201ENST00000378125 CCDC183Q5T5S1 534 aa22.76■■□□□ 1.23
PCDHA4-201ENST00000378125 TTC6Q86TZ1 520 aa22.76■■□□□ 1.23
PCDHA4-201ENST00000378125 SEC31BQ9NQW1 1179 aa22.76■■□□□ 1.23
PCDHA4-201ENST00000378125 ANKRD36CQ5JPF3 1778 aa22.76■■□□□ 1.23
PCDHA4-201ENST00000378125 IDH1O75874 414 aaKnown RBP22.75■■□□□ 1.23
PCDHA4-201ENST00000378125 FGAP02671 866 aa22.75■■□□□ 1.23
PCDHA4-201ENST00000378125 KCNQ4P56696 695 aa22.75■■□□□ 1.23
PCDHA4-201ENST00000378125 KRT85P78386 507 aa22.75■■□□□ 1.23
PCDHA4-201ENST00000378125 WNK3Q9BYP7 1800 aa22.75■■□□□ 1.23
PCDHA4-201ENST00000378125 PHF14O94880 888 aa22.74■■□□□ 1.23
PCDHA4-201ENST00000378125 LRRFIP1Q32MZ4 808 aaKnown RBP22.74■■□□□ 1.23
PCDHA4-201ENST00000378125 FAM184AQ8NB25 1140 aa22.74■■□□□ 1.23
PCDHA4-201ENST00000378125 APPBP2Q92624 585 aa22.74■■□□□ 1.23
PCDHA4-201ENST00000378125 H3BQV1 296 aa22.74■■□□□ 1.23
PCDHA4-201ENST00000378125 GPAA1O43292 621 aa22.74■■□□□ 1.23
PCDHA4-201ENST00000378125 SLC9C2Q5TAH2 1124 aa22.74■■□□□ 1.23
PCDHA4-201ENST00000378125 IFFO2Q5TF58 517 aa22.74■■□□□ 1.23
PCDHA4-201ENST00000378125 GIMAP6Q6P9H5 292 aa22.74■■□□□ 1.23
PCDHA4-201ENST00000378125 PIH1D3Q9NQM4 214 aaKnown RBP22.74■■□□□ 1.23
PCDHA4-201ENST00000378125 MYH3P11055 1940 aa22.73■■□□□ 1.23
PCDHA4-201ENST00000378125 ZFYP08048 801 aaPredicted RBP22.73■■□□□ 1.23
PCDHA4-201ENST00000378125 CSPP1Q1MSJ5 1256 aa22.73■■□□□ 1.23
PCDHA4-201ENST00000378125 CCDC102BQ68D86 513 aa22.73■■□□□ 1.23
PCDHA4-201ENST00000378125 CDCA7Q9BWT1 371 aaPredicted RBP22.73■■□□□ 1.23
PCDHA4-201ENST00000378125 SPEF2Q9C093 1822 aa22.73■■□□□ 1.23
PCDHA4-201ENST00000378125 PFKFB2O60825 505 aa22.73■■□□□ 1.23
PCDHA4-201ENST00000378125 CTDNEP1O95476 244 aa22.72■■□□□ 1.23
PCDHA4-201ENST00000378125 PHLPP1O60346 1717 aa22.72■■□□□ 1.23
PCDHA4-201ENST00000378125 IMMTQ16891 758 aaKnown RBP22.71■■□□□ 1.23
PCDHA4-201ENST00000378125 RAB11FIP4Q86YS3 637 aa22.71■■□□□ 1.23
PCDHA4-201ENST00000378125 UTP14AQ9BVJ6 771 aaKnown RBP22.71■■□□□ 1.23
PCDHA4-201ENST00000378125 THRAP3Q9Y2W1 955 aaKnown RBP22.71■■□□□ 1.23
PCDHA4-201ENST00000378125 SPATA31A5Q5VU36 1347 aa22.71■■□□□ 1.23
PCDHA4-201ENST00000378125 SPATA31A7Q8IWB4 1347 aa22.71■■□□□ 1.23
PCDHA4-201ENST00000378125 SMIM5Q71RC9 77 aa22.71■■□□□ 1.23
PCDHA4-201ENST00000378125 NSUN7Q8NE18 718 aaKnown RBP22.71■■□□□ 1.23
PCDHA4-201ENST00000378125 NIP7Q9Y221 180 aaKnown RBP eCLIP22.71■■□□□ 1.23
PCDHA4-201ENST00000378125 PTPDC1A2A3K4 754 aa22.7■■□□□ 1.22
PCDHA4-201ENST00000378125 CAMTA2O94983 1202 aa22.7■■□□□ 1.22
PCDHA4-201ENST00000378125 MPHOSPH8Q99549 860 aa22.7■■□□□ 1.22
PCDHA4-201ENST00000378125 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.7■■□□□ 1.22
PCDHA4-201ENST00000378125 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.7■■□□□ 1.22
PCDHA4-201ENST00000378125 CEBPZQ03701 1054 aaKnown RBP22.7■■□□□ 1.22
PCDHA4-201ENST00000378125 TICAM2Q86XR7 235 aa22.7■■□□□ 1.22
PCDHA4-201ENST00000378125 SPATA32Q96LK8 384 aa22.7■■□□□ 1.22
PCDHA4-201ENST00000378125 CTNNA3Q9UI47 895 aa22.7■■□□□ 1.22
PCDHA4-201ENST00000378125 NWD2Q9ULI1 1742 aa22.69■■□□□ 1.22
PCDHA4-201ENST00000378125 APPP05067 770 aa22.69■■□□□ 1.22
PCDHA4-201ENST00000378125 PDIA3P30101 505 aaKnown RBP22.69■■□□□ 1.22
PCDHA4-201ENST00000378125 FAM98CQ17RN3 349 aaKnown RBP22.69■■□□□ 1.22
PCDHA4-201ENST00000378125 WWC3Q9ULE0 1092 aa22.69■■□□□ 1.22
PCDHA4-201ENST00000378125 DENND2AQ9ULE3 1009 aa22.69■■□□□ 1.22
PCDHA4-201ENST00000378125 CLCN1P35523 988 aa22.69■■□□□ 1.22
PCDHA4-201ENST00000378125 ADD2P35612 726 aa22.69■■□□□ 1.22
PCDHA4-201ENST00000378125 GUCY1B3Q02153 619 aa22.69■■□□□ 1.22
PCDHA4-201ENST00000378125 PUM3Q15397 648 aaKnown RBP22.69■■□□□ 1.22
PCDHA4-201ENST00000378125 AKAP11Q9UKA4 1901 aa22.68■■□□□ 1.22
PCDHA4-201ENST00000378125 LIG1P18858 919 aa22.68■■□□□ 1.22
PCDHA4-201ENST00000378125 CAMK4Q16566 473 aa22.68■■□□□ 1.22
PCDHA4-201ENST00000378125 SMARCC2Q8TAQ2 1214 aa22.68■■□□□ 1.22
PCDHA4-201ENST00000378125 ZNF532Q9HCE3 1301 aa22.68■■□□□ 1.22
PCDHA4-201ENST00000378125 MYO5AQ9Y4I1 1855 aaKnown RBP22.68■■□□□ 1.22
PCDHA4-201ENST00000378125 NRAPQ86VF7 1730 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms