RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 FGFR2P21802 821 aa16.4■□□□□ 0.22
CKAP2-202ENST00000378034 ZNF804AQ7Z570 1209 aa16.4■□□□□ 0.22
CKAP2-202ENST00000378034 TXNRD3Q86VQ6 643 aa16.4■□□□□ 0.22
CKAP2-202ENST00000378034 LPIN2Q92539 896 aa16.4■□□□□ 0.22
CKAP2-202ENST00000378034 CRBNQ96SW2 442 aa16.4■□□□□ 0.22
CKAP2-202ENST00000378034 GPBP1L1Q9HC44 474 aaPredicted RBP16.4■□□□□ 0.22
CKAP2-202ENST00000378034 WDR90Q96KV7 1748 aa16.4■□□□□ 0.22
CKAP2-202ENST00000378034 YDJCA8MPS7 323 aa16.4■□□□□ 0.22
CKAP2-202ENST00000378034 SNAP23O00161 211 aa16.4■□□□□ 0.22
CKAP2-202ENST00000378034 SURF6O75683 361 aaKnown RBP16.4■□□□□ 0.22
CKAP2-202ENST00000378034 IFIT1P09914 478 aaKnown RBP16.4■□□□□ 0.22
CKAP2-202ENST00000378034 CXCL9Q07325 125 aa16.4■□□□□ 0.22
CKAP2-202ENST00000378034 CIAPIN1Q6FI81 312 aa16.4■□□□□ 0.22
CKAP2-202ENST00000378034 DDNO94850 711 aaPredicted RBP16.39■□□□□ 0.21
CKAP2-202ENST00000378034 KLRK1P26718 216 aa16.39■□□□□ 0.21
CKAP2-202ENST00000378034 HSP90AB4PQ58FF6 505 aa16.39■□□□□ 0.21
CKAP2-202ENST00000378034 L3MBTL3Q96JM7 780 aaPredicted RBP16.39■□□□□ 0.21
CKAP2-202ENST00000378034 AKAP2Q9Y2D5 859 aa16.39■□□□□ 0.21
CKAP2-202ENST00000378034 PSME4Q14997 1843 aa16.39■□□□□ 0.21
CKAP2-202ENST00000378034 SLC5A1P13866 664 aa16.38■□□□□ 0.21
CKAP2-202ENST00000378034 SIRT2Q8IXJ6 389 aa16.38■□□□□ 0.21
CKAP2-202ENST00000378034 OS9Q13438 667 aaPredicted RBP16.38■□□□□ 0.21
CKAP2-202ENST00000378034 ATP2B3Q16720 1220 aa16.38■□□□□ 0.21
CKAP2-202ENST00000378034 CAVIN4Q5BKX8 364 aa16.38■□□□□ 0.21
CKAP2-202ENST00000378034 ZNF526Q8TF50 670 aaPredicted RBP16.38■□□□□ 0.21
CKAP2-202ENST00000378034 CD209Q9NNX6 404 aa16.38■□□□□ 0.21
CKAP2-202ENST00000378034 SCN4AP35499 1836 aa16.37■□□□□ 0.21
CKAP2-202ENST00000378034 RAD17O75943 681 aa16.37■□□□□ 0.21
CKAP2-202ENST00000378034 IL1R1P14778 569 aa16.37■□□□□ 0.21
CKAP2-202ENST00000378034 HIBADHP31937 336 aaKnown RBP16.37■□□□□ 0.21
CKAP2-202ENST00000378034 TFCP2Q12800 502 aa16.37■□□□□ 0.21
CKAP2-202ENST00000378034 ERC1Q8IUD2 1116 aa16.37■□□□□ 0.21
CKAP2-202ENST00000378034 FAM84BQ96KN1 310 aaPredicted RBP16.37■□□□□ 0.21
CKAP2-202ENST00000378034 GJA3Q9Y6H8 435 aa16.37■□□□□ 0.21
CKAP2-202ENST00000378034 FBXO33Q7Z6M2 555 aa16.37■□□□□ 0.21
CKAP2-202ENST00000378034 GPR108Q9NPR9 543 aa16.37■□□□□ 0.21
CKAP2-202ENST00000378034 SCN9AQ15858 1988 aa16.36■□□□□ 0.21
CKAP2-202ENST00000378034 IQCA1LA6NCM1 817 aa16.36■□□□□ 0.21
CKAP2-202ENST00000378034 USP17L3A6NCW0 530 aa16.36■□□□□ 0.21
CKAP2-202ENST00000378034 USP17L4A6NCW7 530 aa16.36■□□□□ 0.21
CKAP2-202ENST00000378034 SASH1O94885 1247 aa16.36■□□□□ 0.21
CKAP2-202ENST00000378034 VIL1P09327 827 aaKnown RBP16.36■□□□□ 0.21
CKAP2-202ENST00000378034 VEGFAP15692 232 aaPredicted RBP16.36■□□□□ 0.21
CKAP2-202ENST00000378034 USP17L1Q7RTZ2 530 aa16.36■□□□□ 0.21
CKAP2-202ENST00000378034 ZNF609O15014 1411 aa16.36■□□□□ 0.21
CKAP2-202ENST00000378034 ARAP2Q8WZ64 1704 aa16.36■□□□□ 0.21
CKAP2-202ENST00000378034 PSMD14O00487 310 aa16.35■□□□□ 0.21
CKAP2-202ENST00000378034 RPS12P25398 132 aaKnown RBP16.35■□□□□ 0.21
CKAP2-202ENST00000378034 STRIP1Q5VSL9 837 aa16.35■□□□□ 0.21
CKAP2-202ENST00000378034 VPS37DQ86XT2 251 aa16.35■□□□□ 0.21
CKAP2-202ENST00000378034 GYG1P46976 350 aa16.35■□□□□ 0.21
CKAP2-202ENST00000378034 TDRD7Q8NHU6 1098 aaKnown RBP16.35■□□□□ 0.21
CKAP2-202ENST00000378034 DPF2Q92785 391 aa16.35■□□□□ 0.21
CKAP2-202ENST00000378034 RRAGCQ9HB90 399 aa16.35■□□□□ 0.21
CKAP2-202ENST00000378034 NMRK2Q9NPI5 230 aa16.35■□□□□ 0.21
CKAP2-202ENST00000378034 KCNQ5Q9NR82 932 aa16.35■□□□□ 0.21
CKAP2-202ENST00000378034 ZBTB22O15209 634 aa16.34■□□□□ 0.21
CKAP2-202ENST00000378034 RAB11FIP3O75154 756 aa16.34■□□□□ 0.21
CKAP2-202ENST00000378034 LMOD1P29536 600 aaPredicted RBP16.34■□□□□ 0.21
CKAP2-202ENST00000378034 EXOC6BQ9Y2D4 811 aa16.34■□□□□ 0.21
CKAP2-202ENST00000378034 A0A1B0GUL7 405 aa16.33■□□□□ 0.21
CKAP2-202ENST00000378034 POTECB2RU33 542 aa16.33■□□□□ 0.21
CKAP2-202ENST00000378034 TTLL5Q6EMB2 1281 aa16.33■□□□□ 0.21
CKAP2-202ENST00000378034 RSBN1LQ6PCB5 846 aaPredicted RBP16.33■□□□□ 0.21
CKAP2-202ENST00000378034 AGBL3Q8NEM8 1001 aa16.33■□□□□ 0.21
CKAP2-202ENST00000378034 HACL1Q9UJ83 578 aa16.33■□□□□ 0.21
CKAP2-202ENST00000378034 PCDHB15Q9Y5E8 787 aa16.33■□□□□ 0.21
CKAP2-202ENST00000378034 MYO3BQ8WXR4 1341 aa16.33■□□□□ 0.2
CKAP2-202ENST00000378034 GMPSP49915 693 aaPredicted RBP16.33■□□□□ 0.2
CKAP2-202ENST00000378034 GNL3LQ9NVN8 582 aaKnown RBP16.33■□□□□ 0.2
CKAP2-202ENST00000378034 ZNF646O15015 1829 aaPredicted RBP16.32■□□□□ 0.2
CKAP2-202ENST00000378034 MMP14P50281 582 aa16.32■□□□□ 0.2
CKAP2-202ENST00000378034 BCAMP50895 628 aa16.32■□□□□ 0.2
CKAP2-202ENST00000378034 SCNN1DP51172 638 aa16.32■□□□□ 0.2
CKAP2-202ENST00000378034 TIMM10P62072 90 aa16.32■□□□□ 0.2
CKAP2-202ENST00000378034 FKBP1AP62942 108 aaKnown RBP16.32■□□□□ 0.2
CKAP2-202ENST00000378034 TNNI3KQ59H18 835 aa16.32■□□□□ 0.2
CKAP2-202ENST00000378034 DACT2Q5SW24 774 aa16.32■□□□□ 0.2
CKAP2-202ENST00000378034 EXOC6Q8TAG9 804 aa16.32■□□□□ 0.2
CKAP2-202ENST00000378034 KIF1BPQ96EK5 621 aa16.32■□□□□ 0.2
CKAP2-202ENST00000378034 GPRC5DQ9NZD1 345 aa16.32■□□□□ 0.2
CKAP2-202ENST00000378034 FPGT-TNNI3KV9GXZ4 949 aa16.32■□□□□ 0.2
CKAP2-202ENST00000378034 FAM205AQ6ZU69 1335 aa16.32■□□□□ 0.2
CKAP2-202ENST00000378034 KIF3CO14782 793 aa16.31■□□□□ 0.2
CKAP2-202ENST00000378034 CENPBP07199 599 aaPredicted RBP16.31■□□□□ 0.2
CKAP2-202ENST00000378034 GTF2IP78347 998 aa16.31■□□□□ 0.2
CKAP2-202ENST00000378034 SEMA3EO15041 775 aa16.31■□□□□ 0.2
CKAP2-202ENST00000378034 RHPN1Q8TCX5 695 aa16.31■□□□□ 0.2
CKAP2-202ENST00000378034 XAGE2Q96GT9 111 aa16.31■□□□□ 0.2
CKAP2-202ENST00000378034 NEUROD6Q96NK8 337 aa16.31■□□□□ 0.2
CKAP2-202ENST00000378034 DCTPP1Q9H773 170 aa16.31■□□□□ 0.2
CKAP2-202ENST00000378034 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.31■□□□□ 0.2
CKAP2-202ENST00000378034 FRAT2O75474 233 aaPredicted RBP16.3■□□□□ 0.2
CKAP2-202ENST00000378034 PNMA8AQ86V59 439 aaPredicted RBP16.3■□□□□ 0.2
CKAP2-202ENST00000378034 C16orf71Q8IYS4 520 aaPredicted RBP16.3■□□□□ 0.2
CKAP2-202ENST00000378034 FBXW7Q969H0 707 aa16.3■□□□□ 0.2
CKAP2-202ENST00000378034 GMLQ99445 158 aa16.3■□□□□ 0.2
CKAP2-202ENST00000378034 TAF1DQ9H5J8 278 aaPredicted RBP16.3■□□□□ 0.2
CKAP2-202ENST00000378034 CNOT7Q9UIV1 285 aaKnown RBP16.3■□□□□ 0.2
CKAP2-202ENST00000378034 ZBTB12Q9Y330 459 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms