RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 RBM33Q96EV2 1170 aaKnown RBP10.04□□□□□ -0.8
PCDH9-202ENST00000377865 TRERF1Q96PN7 1200 aa10.04□□□□□ -0.8
PCDH9-202ENST00000377865 ZBTB43O43298 467 aa10.04□□□□□ -0.8
PCDH9-202ENST00000377865 PRC1O43663 620 aa10.04□□□□□ -0.8
PCDH9-202ENST00000377865 SLC5A1P13866 664 aa10.04□□□□□ -0.8
PCDH9-202ENST00000377865 LMOD1P29536 600 aaPredicted RBP10.04□□□□□ -0.8
PCDH9-202ENST00000377865 BAG1Q99933 345 aaPredicted RBP10.04□□□□□ -0.8
PCDH9-202ENST00000377865 LRRC2Q9BYS8 371 aa10.04□□□□□ -0.8
PCDH9-202ENST00000377865 ISM2Q6H9L7 571 aa10.04□□□□□ -0.8
PCDH9-202ENST00000377865 TMTC2Q8N394 836 aa10.04□□□□□ -0.8
PCDH9-202ENST00000377865 SLC26A6Q9BXS9 759 aa10.04□□□□□ -0.8
PCDH9-202ENST00000377865 RASSF4Q9H2L5 321 aa10.04□□□□□ -0.8
PCDH9-202ENST00000377865 BMP2KQ9NSY1 1161 aaPredicted RBP10.04□□□□□ -0.8
PCDH9-202ENST00000377865 UQCRFS1P1P0C7P4 283 aa10.03□□□□□ -0.8
PCDH9-202ENST00000377865 CYLC1P35663 651 aaPredicted RBP10.03□□□□□ -0.8
PCDH9-202ENST00000377865 UBE3BQ7Z3V4 1068 aa10.03□□□□□ -0.8
PCDH9-202ENST00000377865 OPA1O60313 960 aa10.03□□□□□ -0.8
PCDH9-202ENST00000377865 KRT18P05783 430 aaKnown RBP10.03□□□□□ -0.8
PCDH9-202ENST00000377865 LSG1Q9H089 658 aaKnown RBP10.03□□□□□ -0.8
PCDH9-202ENST00000377865 LRP2BPQ9P2M1 347 aa10.03□□□□□ -0.8
PCDH9-202ENST00000377865 HSF2BPO75031 334 aa10.03□□□□□ -0.8
PCDH9-202ENST00000377865 ME3Q16798 604 aa10.03□□□□□ -0.8
PCDH9-202ENST00000377865 CATIPQ7Z7H3 387 aa10.03□□□□□ -0.8
PCDH9-202ENST00000377865 ANKRD18BA2A2Z9 1011 aa10.03□□□□□ -0.8
PCDH9-202ENST00000377865 HOXC9P31274 260 aa10.03□□□□□ -0.8
PCDH9-202ENST00000377865 IFNL2Q8IZJ0 200 aa10.03□□□□□ -0.8
PCDH9-202ENST00000377865 STK11IPQ8N1F8 1099 aa10.03□□□□□ -0.8
PCDH9-202ENST00000377865 GTF3C6Q969F1 213 aa10.03□□□□□ -0.8
PCDH9-202ENST00000377865 MRVI1Q9Y6F6 885 aa10.03□□□□□ -0.8
PCDH9-202ENST00000377865 NEO1Q92859 1461 aa10.03□□□□□ -0.8
PCDH9-202ENST00000377865 MAP3K19Q56UN5 1328 aa10.03□□□□□ -0.8
PCDH9-202ENST00000377865 STARD3NLO95772 234 aa10.02□□□□□ -0.8
PCDH9-202ENST00000377865 CAPN2P17655 700 aa10.02□□□□□ -0.8
PCDH9-202ENST00000377865 IGHMBP2P38935 993 aaKnown RBP10.02□□□□□ -0.8
PCDH9-202ENST00000377865 GTF2A1P52655 376 aaPredicted RBP10.02□□□□□ -0.8
PCDH9-202ENST00000377865 BICC1Q9H694 974 aaKnown RBP10.02□□□□□ -0.8
PCDH9-202ENST00000377865 N4BP3O15049 544 aa10.02□□□□□ -0.81
PCDH9-202ENST00000377865 FANCCQ00597 558 aa10.02□□□□□ -0.81
PCDH9-202ENST00000377865 TRIM14Q14142 442 aa10.02□□□□□ -0.81
PCDH9-202ENST00000377865 CT47A1Q5JQC4 288 aaPredicted RBP10.02□□□□□ -0.81
PCDH9-202ENST00000377865 LRRC8AQ8IWT6 810 aa10.02□□□□□ -0.81
PCDH9-202ENST00000377865 SIRT2Q8IXJ6 389 aa10.02□□□□□ -0.81
PCDH9-202ENST00000377865 KIAA1524Q8TCG1 905 aa10.02□□□□□ -0.81
PCDH9-202ENST00000377865 ADGRB3O60242 1522 aa10.02□□□□□ -0.81
PCDH9-202ENST00000377865 KRT83P78385 493 aa10.02□□□□□ -0.81
PCDH9-202ENST00000377865 ZRSR2Q15696 482 aaKnown RBP10.02□□□□□ -0.81
PCDH9-202ENST00000377865 PROSER2Q86WR7 435 aaPredicted RBP10.02□□□□□ -0.81
PCDH9-202ENST00000377865 CNGA4Q8IV77 575 aa10.02□□□□□ -0.81
PCDH9-202ENST00000377865 SYTL4Q96C24 671 aaPredicted RBP10.02□□□□□ -0.81
PCDH9-202ENST00000377865 UTP14AQ9BVJ6 771 aaKnown RBP10.02□□□□□ -0.81
PCDH9-202ENST00000377865 PYCARDQ9ULZ3 195 aa10.02□□□□□ -0.81
PCDH9-202ENST00000377865 HAND2P61296 217 aa10.02□□□□□ -0.81
PCDH9-202ENST00000377865 TTC31Q49AM3 519 aaPredicted RBP10.02□□□□□ -0.81
PCDH9-202ENST00000377865 MFSD6Q6ZSS7 791 aa10.02□□□□□ -0.81
PCDH9-202ENST00000377865 MICU3Q86XE3 530 aa10.02□□□□□ -0.81
PCDH9-202ENST00000377865 IQCA1Q86XH1 822 aa10.02□□□□□ -0.81
PCDH9-202ENST00000377865 NUTM2AQ8IVF1 878 aaPredicted RBP10.02□□□□□ -0.81
PCDH9-202ENST00000377865 VPS18Q9P253 973 aa10.02□□□□□ -0.81
PCDH9-202ENST00000377865 AKR1B15C9JRZ8 316 aaPredicted RBP10.02□□□□□ -0.81
PCDH9-202ENST00000377865 ARHGAP6O43182 974 aa10.02□□□□□ -0.81
PCDH9-202ENST00000377865 XAGE3Q8WTP9 111 aa10.02□□□□□ -0.81
PCDH9-202ENST00000377865 HECW2Q9P2P5 1572 aa10.01□□□□□ -0.81
PCDH9-202ENST00000377865 ANXA1P04083 346 aa10.01□□□□□ -0.81
PCDH9-202ENST00000377865 AMPD3Q01432 767 aa10.01□□□□□ -0.81
PCDH9-202ENST00000377865 PDE4CQ08493 712 aa10.01□□□□□ -0.81
PCDH9-202ENST00000377865 KRBA2Q6ZNG9 492 aa10.01□□□□□ -0.81
PCDH9-202ENST00000377865 MARCKSP29966 332 aaPredicted RBP10.01□□□□□ -0.81
PCDH9-202ENST00000377865 CENPHQ9H3R5 247 aa10.01□□□□□ -0.81
PCDH9-202ENST00000377865 PSDA5PKW4 1024 aaPredicted RBP10.01□□□□□ -0.81
PCDH9-202ENST00000377865 TFCP2Q12800 502 aa10.01□□□□□ -0.81
PCDH9-202ENST00000377865 ANO1Q5XXA6 986 aa10.01□□□□□ -0.81
PCDH9-202ENST00000377865 TTF2Q9UNY4 1162 aaKnown RBP10.01□□□□□ -0.81
PCDH9-202ENST00000377865 ATP8B1O43520 1251 aa10.01□□□□□ -0.81
PCDH9-202ENST00000377865 MCM6Q14566 821 aa10.01□□□□□ -0.81
PCDH9-202ENST00000377865 KRI1Q8N9T8 703 aaKnown RBP10.01□□□□□ -0.81
PCDH9-202ENST00000377865 RTL9Q8NET4 1388 aa10.01□□□□□ -0.81
PCDH9-202ENST00000377865 A0A1B0GVL5 298 aa10□□□□□ -0.81
PCDH9-202ENST00000377865 LIG1P18858 919 aa10□□□□□ -0.81
PCDH9-202ENST00000377865 TOM1L2Q6ZVM7 507 aa10□□□□□ -0.81
PCDH9-202ENST00000377865 CACNA2D4Q7Z3S7 1137 aa10□□□□□ -0.81
PCDH9-202ENST00000377865 GPR161Q8N6U8 529 aaKnown RBP10□□□□□ -0.81
PCDH9-202ENST00000377865 ZSWIM4Q9H7M6 989 aa10□□□□□ -0.81
PCDH9-202ENST00000377865 TCEAL9Q9UHQ7 104 aa10□□□□□ -0.81
PCDH9-202ENST00000377865 KDRP35968 1356 aa10□□□□□ -0.81
PCDH9-202ENST00000377865 A0A1B0GUL7 405 aa10□□□□□ -0.81
PCDH9-202ENST00000377865 NLRP5P59047 1200 aa10□□□□□ -0.81
PCDH9-202ENST00000377865 RTN1Q16799 776 aa10□□□□□ -0.81
PCDH9-202ENST00000377865 TNNI3KQ59H18 835 aa10□□□□□ -0.81
PCDH9-202ENST00000377865 RRAGBQ5VZM2 374 aa10□□□□□ -0.81
PCDH9-202ENST00000377865 FPGT-TNNI3KV9GXZ4 949 aa10□□□□□ -0.81
PCDH9-202ENST00000377865 CUTAO60888 179 aa10□□□□□ -0.81
PCDH9-202ENST00000377865 WTAPQ15007 396 aa10□□□□□ -0.81
PCDH9-202ENST00000377865 FAM227BQ96M60 508 aa10□□□□□ -0.81
PCDH9-202ENST00000377865 TEX13AQ9BXU3 409 aaPredicted RBP10□□□□□ -0.81
PCDH9-202ENST00000377865 RSPH14Q9UHP6 348 aa10□□□□□ -0.81
PCDH9-202ENST00000377865 RNMTO43148 476 aaKnown RBP10□□□□□ -0.81
PCDH9-202ENST00000377865 IGSF3O75054 1194 aa10□□□□□ -0.81
PCDH9-202ENST00000377865 MTIF2P46199 727 aaKnown RBP10□□□□□ -0.81
PCDH9-202ENST00000377865 FCHSD1Q86WN1 690 aa10□□□□□ -0.81
PCDH9-202ENST00000377865 CYP2E1P05181 493 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms