RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 VPS37CA5D8V6 355 aaPredicted RBP16.55■□□□□ 0.24
MSH5-202ENST00000375740 CTSWP56202 376 aa16.55■□□□□ 0.24
MSH5-202ENST00000375740 LDHAL6AQ6ZMR3 332 aa16.55■□□□□ 0.24
MSH5-202ENST00000375740 Q6ZUG5 572 aa16.55■□□□□ 0.24
MSH5-202ENST00000375740 STOX1Q6ZVD7 989 aa16.55■□□□□ 0.24
MSH5-202ENST00000375740 ZNF830Q96NB3 372 aaPredicted RBP16.55■□□□□ 0.24
MSH5-202ENST00000375740 NUP98P52948 1817 aa16.55■□□□□ 0.24
MSH5-202ENST00000375740 SPATA31A1Q5TZJ5 1347 aa16.55■□□□□ 0.24
MSH5-202ENST00000375740 ERVV-1B6SEH8 477 aa16.55■□□□□ 0.24
MSH5-202ENST00000375740 HSPD1P10809 573 aaKnown RBP16.55■□□□□ 0.24
MSH5-202ENST00000375740 SCARF1Q14162 830 aa16.55■□□□□ 0.24
MSH5-202ENST00000375740 DDB1Q16531 1140 aa16.55■□□□□ 0.24
MSH5-202ENST00000375740 METTL24Q5JXM2 366 aa16.55■□□□□ 0.24
MSH5-202ENST00000375740 CDCA7Q9BWT1 371 aaPredicted RBP16.55■□□□□ 0.24
MSH5-202ENST00000375740 CCDC39Q9UFE4 941 aa16.55■□□□□ 0.24
MSH5-202ENST00000375740 MAST3O60307 1309 aa16.55■□□□□ 0.24
MSH5-202ENST00000375740 ANKRD18BA2A2Z9 1011 aa16.54■□□□□ 0.24
MSH5-202ENST00000375740 ACSBG1Q96GR2 724 aa16.54■□□□□ 0.24
MSH5-202ENST00000375740 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.54■□□□□ 0.24
MSH5-202ENST00000375740 DOT1LQ8TEK3 1739 aa16.54■□□□□ 0.24
MSH5-202ENST00000375740 ANKRD36CQ5JPF3 1778 aa16.54■□□□□ 0.24
MSH5-202ENST00000375740 SPEF2Q9C093 1822 aa16.54■□□□□ 0.24
MSH5-202ENST00000375740 M0R2C6 588 aa16.54■□□□□ 0.24
MSH5-202ENST00000375740 MCM5P33992 734 aa16.54■□□□□ 0.24
MSH5-202ENST00000375740 A0A0G2JLW4 131 aa16.53■□□□□ 0.24
MSH5-202ENST00000375740 DNM1Q05193 864 aaKnown RBP16.53■□□□□ 0.24
MSH5-202ENST00000375740 ATP2B3Q16720 1220 aa16.53■□□□□ 0.24
MSH5-202ENST00000375740 C17orf53Q8N3J3 647 aaPredicted RBP16.53■□□□□ 0.24
MSH5-202ENST00000375740 OSBP2Q969R2 916 aa16.53■□□□□ 0.24
MSH5-202ENST00000375740 PDE8AO60658 829 aa16.53■□□□□ 0.24
MSH5-202ENST00000375740 ZAP70P43403 619 aa16.53■□□□□ 0.24
MSH5-202ENST00000375740 TPRNQ4KMQ1 711 aa16.53■□□□□ 0.24
MSH5-202ENST00000375740 ZNF34Q8IZ26 560 aa16.53■□□□□ 0.24
MSH5-202ENST00000375740 LRRC2Q9BYS8 371 aa16.53■□□□□ 0.24
MSH5-202ENST00000375740 CNNM1Q9NRU3 951 aa16.53■□□□□ 0.24
MSH5-202ENST00000375740 RIC1Q4ADV7 1423 aa16.53■□□□□ 0.24
MSH5-202ENST00000375740 UBN2Q6ZU65 1347 aa16.53■□□□□ 0.24
MSH5-202ENST00000375740 FIBPO43427 364 aa16.53■□□□□ 0.24
MSH5-202ENST00000375740 DNTTIP2Q5QJE6 756 aaKnown RBP16.53■□□□□ 0.24
MSH5-202ENST00000375740 INTS5Q6P9B9 1019 aaKnown RBP16.53■□□□□ 0.24
MSH5-202ENST00000375740 SYAP1Q96A49 352 aaPredicted RBP16.53■□□□□ 0.24
MSH5-202ENST00000375740 THRAP3Q9Y2W1 955 aaKnown RBP16.53■□□□□ 0.24
MSH5-202ENST00000375740 NUTM2BA6NNL0 878 aaPredicted RBP16.52■□□□□ 0.24
MSH5-202ENST00000375740 NUTM2EB1AL46 878 aaPredicted RBP16.52■□□□□ 0.24
MSH5-202ENST00000375740 FGD1P98174 961 aa16.52■□□□□ 0.24
MSH5-202ENST00000375740 NUTM2AQ8IVF1 878 aaPredicted RBP16.52■□□□□ 0.24
MSH5-202ENST00000375740 MARCH10Q8NA82 808 aaPredicted RBP16.52■□□□□ 0.24
MSH5-202ENST00000375740 MYRIPQ8NFW9 859 aa16.52■□□□□ 0.24
MSH5-202ENST00000375740 HSP90B1P14625 803 aaKnown RBP16.52■□□□□ 0.23
MSH5-202ENST00000375740 PDCP20941 246 aa16.52■□□□□ 0.23
MSH5-202ENST00000375740 EIF5P55010 431 aaKnown RBP16.52■□□□□ 0.23
MSH5-202ENST00000375740 UTP14CQ5TAP6 766 aaKnown RBP16.52■□□□□ 0.23
MSH5-202ENST00000375740 PI16Q6UXB8 463 aa16.52■□□□□ 0.23
MSH5-202ENST00000375740 DHX32Q7L7V1 743 aaKnown RBP16.52■□□□□ 0.23
MSH5-202ENST00000375740 LAMA4Q16363 1823 aa16.51■□□□□ 0.23
MSH5-202ENST00000375740 MYH3P11055 1940 aa16.51■□□□□ 0.23
MSH5-202ENST00000375740 PTMAP06454 111 aaKnown RBP16.51■□□□□ 0.23
MSH5-202ENST00000375740 HMGB1P09429 215 aaKnown RBP16.51■□□□□ 0.23
MSH5-202ENST00000375740 PDIA4P13667 645 aaKnown RBP16.51■□□□□ 0.23
MSH5-202ENST00000375740 ATP6V1AP38606 617 aa16.51■□□□□ 0.23
MSH5-202ENST00000375740 WASHC4Q2M389 1173 aa16.51■□□□□ 0.23
MSH5-202ENST00000375740 LRRFIP1Q32MZ4 808 aaKnown RBP16.51■□□□□ 0.23
MSH5-202ENST00000375740 CDC37L1Q7L3B6 337 aa16.51■□□□□ 0.23
MSH5-202ENST00000375740 BRF1Q92994 677 aa16.51■□□□□ 0.23
MSH5-202ENST00000375740 GTF3C6Q969F1 213 aa16.51■□□□□ 0.23
MSH5-202ENST00000375740 E7EWF7 191 aa16.51■□□□□ 0.23
MSH5-202ENST00000375740 UBE2HP62256 183 aa16.51■□□□□ 0.23
MSH5-202ENST00000375740 ZFYP08048 801 aaPredicted RBP16.5■□□□□ 0.23
MSH5-202ENST00000375740 TTLL5Q6EMB2 1281 aa16.5■□□□□ 0.23
MSH5-202ENST00000375740 FERMT3Q86UX7 667 aa16.5■□□□□ 0.23
MSH5-202ENST00000375740 CCDC87Q9NVE4 849 aa16.5■□□□□ 0.23
MSH5-202ENST00000375740 PHLPP1O60346 1717 aa16.5■□□□□ 0.23
MSH5-202ENST00000375740 CRKLP46109 303 aaKnown RBP16.5■□□□□ 0.23
MSH5-202ENST00000375740 EXOSC10Q01780 885 aaKnown RBP16.5■□□□□ 0.23
MSH5-202ENST00000375740 SUSD4Q5VX71 490 aa16.5■□□□□ 0.23
MSH5-202ENST00000375740 VGLL2Q8N8G2 317 aa16.5■□□□□ 0.23
MSH5-202ENST00000375740 NRAPQ86VF7 1730 aa16.49■□□□□ 0.23
MSH5-202ENST00000375740 JAK2O60674 1132 aa16.49■□□□□ 0.23
MSH5-202ENST00000375740 KIAA2012Q0VF49 1180 aa16.49■□□□□ 0.23
MSH5-202ENST00000375740 LOC102724428A0A0B4J2F2 783 aa16.49■□□□□ 0.23
MSH5-202ENST00000375740 PDE8BO95263 885 aa16.49■□□□□ 0.23
MSH5-202ENST00000375740 MCAMP43121 646 aa16.49■□□□□ 0.23
MSH5-202ENST00000375740 SIK1P57059 783 aa16.49■□□□□ 0.23
MSH5-202ENST00000375740 LTBP4Q8N2S1 1624 aa16.48■□□□□ 0.23
MSH5-202ENST00000375740 SPATA31A5Q5VU36 1347 aa16.48■□□□□ 0.23
MSH5-202ENST00000375740 SPATA31A7Q8IWB4 1347 aa16.48■□□□□ 0.23
MSH5-202ENST00000375740 SLIT2O94813 1529 aa16.48■□□□□ 0.23
MSH5-202ENST00000375740 IGSF3O75054 1194 aa16.48■□□□□ 0.23
MSH5-202ENST00000375740 HCLS1P14317 486 aaPredicted RBP16.48■□□□□ 0.23
MSH5-202ENST00000375740 SCRN1Q12765 414 aa16.48■□□□□ 0.23
MSH5-202ENST00000375740 ITPK1Q13572 414 aa16.48■□□□□ 0.23
MSH5-202ENST00000375740 PPP4R3BQ5MIZ7 849 aa16.48■□□□□ 0.23
MSH5-202ENST00000375740 FAM173BQ6P4H8 233 aa16.48■□□□□ 0.23
MSH5-202ENST00000375740 APPBP2Q92624 585 aa16.48■□□□□ 0.23
MSH5-202ENST00000375740 PUS7LQ9H0K6 701 aaKnown RBP16.48■□□□□ 0.23
MSH5-202ENST00000375740 SPDYE4A6NLX3 237 aa16.47■□□□□ 0.23
MSH5-202ENST00000375740 FOXP2O15409 715 aa16.47■□□□□ 0.23
MSH5-202ENST00000375740 PHF14O94880 888 aa16.47■□□□□ 0.23
MSH5-202ENST00000375740 APOBRQ0VD83 1088 aa16.47■□□□□ 0.23
MSH5-202ENST00000375740 TSPY26PQ9H489 355 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms