RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 GNAI1P63096 354 aa15.59■□□□□ 0.09
LSM2-208ENST00000375661 USP17L1Q7RTZ2 530 aa15.59■□□□□ 0.09
LSM2-208ENST00000375661 CWC25Q9NXE8 425 aaPredicted RBP15.59■□□□□ 0.09
LSM2-208ENST00000375661 DDX58O95786 925 aaKnown RBP15.58■□□□□ 0.08
LSM2-208ENST00000375661 NOM1Q5C9Z4 860 aaKnown RBP15.58■□□□□ 0.08
LSM2-208ENST00000375661 MYD88Q99836 296 aa15.58■□□□□ 0.08
LSM2-208ENST00000375661 PHAXQ9H814 394 aaKnown RBP15.58■□□□□ 0.08
LSM2-208ENST00000375661 MED23Q9ULK4 1368 aa15.58■□□□□ 0.08
LSM2-208ENST00000375661 SOX10P56693 466 aa15.57■□□□□ 0.08
LSM2-208ENST00000375661 HNRNPUQ00839 825 aaKnown RBP eCLIP15.57■□□□□ 0.08
LSM2-208ENST00000375661 CDC5LQ99459 802 aaKnown RBP15.57■□□□□ 0.08
LSM2-208ENST00000375661 METTL22Q9BUU2 404 aaPredicted RBP15.57■□□□□ 0.08
LSM2-208ENST00000375661 MYO3BQ8WXR4 1341 aa15.57■□□□□ 0.08
LSM2-208ENST00000375661 TSR2Q969E8 191 aaKnown RBP15.56■□□□□ 0.08
LSM2-208ENST00000375661 LAMB1P07942 1786 aa15.55■□□□□ 0.08
LSM2-208ENST00000375661 NF2P35240 595 aa15.55■□□□□ 0.08
LSM2-208ENST00000375661 TM4SF4P48230 202 aa15.55■□□□□ 0.08
LSM2-208ENST00000375661 OGFOD1Q8N543 542 aa15.55■□□□□ 0.08
LSM2-208ENST00000375661 BSDC1Q9NW68 430 aaPredicted RBP15.55■□□□□ 0.08
LSM2-208ENST00000375661 ECM29Q5VYK3 1845 aa15.54■□□□□ 0.08
LSM2-208ENST00000375661 CTSWP56202 376 aa15.54■□□□□ 0.08
LSM2-208ENST00000375661 STRIP1Q5VSL9 837 aa15.54■□□□□ 0.08
LSM2-208ENST00000375661 PRPF38BQ5VTL8 546 aaKnown RBP15.54■□□□□ 0.08
LSM2-208ENST00000375661 CCDC30Q5VVM6 783 aa15.54■□□□□ 0.08
LSM2-208ENST00000375661 CDCA7LQ96GN5 454 aa15.54■□□□□ 0.08
LSM2-208ENST00000375661 HDAC9Q9UKV0 1011 aa15.54■□□□□ 0.08
LSM2-208ENST00000375661 HPS5Q9UPZ3 1129 aa15.54■□□□□ 0.08
LSM2-208ENST00000375661 FANCIQ9NVI1 1328 aa15.53■□□□□ 0.08
LSM2-208ENST00000375661 DACT2Q5SW24 774 aa15.53■□□□□ 0.08
LSM2-208ENST00000375661 ZNF296Q8WUU4 475 aaPredicted RBP15.53■□□□□ 0.08
LSM2-208ENST00000375661 CCDC85AQ96PX6 553 aaPredicted RBP15.53■□□□□ 0.08
LSM2-208ENST00000375661 CFHR5Q9BXR6 569 aa15.53■□□□□ 0.08
LSM2-208ENST00000375661 COA1Q9GZY4 146 aa15.53■□□□□ 0.08
LSM2-208ENST00000375661 MINPP1Q9UNW1 487 aa15.53■□□□□ 0.08
LSM2-208ENST00000375661 CACNA1FO60840 1977 aa15.53■□□□□ 0.08
LSM2-208ENST00000375661 UBE2Q2LH0YL09 131 aa15.52■□□□□ 0.08
LSM2-208ENST00000375661 WNT10BO00744 389 aa15.52■□□□□ 0.08
LSM2-208ENST00000375661 CCT4P50991 539 aaKnown RBP15.52■□□□□ 0.08
LSM2-208ENST00000375661 SLFN5Q08AF3 891 aa15.52■□□□□ 0.08
LSM2-208ENST00000375661 SREBF2Q12772 1141 aa15.52■□□□□ 0.08
LSM2-208ENST00000375661 NBPF9Q3BBW0 867 aa15.52■□□□□ 0.08
LSM2-208ENST00000375661 KSR2Q6VAB6 950 aa15.52■□□□□ 0.08
LSM2-208ENST00000375661 C8orf58Q8NAV2 365 aa15.52■□□□□ 0.08
LSM2-208ENST00000375661 TTLL11Q8NHH1 800 aa15.52■□□□□ 0.08
LSM2-208ENST00000375661 MAP3K2Q9Y2U5 619 aa15.52■□□□□ 0.08
LSM2-208ENST00000375661 LEMD3Q9Y2U8 911 aa15.52■□□□□ 0.08
LSM2-208ENST00000375661 COL1A1P02452 1464 aaPredicted RBP15.52■□□□□ 0.07
LSM2-208ENST00000375661 GPR25O00155 361 aa15.51■□□□□ 0.07
LSM2-208ENST00000375661 ELL2O00472 640 aaPredicted RBP15.51■□□□□ 0.07
LSM2-208ENST00000375661 TBC1D8O95759 1140 aa15.51■□□□□ 0.07
LSM2-208ENST00000375661 NEXNQ0ZGT2 675 aa15.51■□□□□ 0.07
LSM2-208ENST00000375661 TTLL12Q14166 644 aaPredicted RBP15.51■□□□□ 0.07
LSM2-208ENST00000375661 MOB2Q70IA6 237 aa15.51■□□□□ 0.07
LSM2-208ENST00000375661 ARMC9Q7Z3E5 817 aa15.51■□□□□ 0.07
LSM2-208ENST00000375661 TRMT2AQ8IZ69 625 aaKnown RBP15.51■□□□□ 0.07
LSM2-208ENST00000375661 TSPYL6Q8N831 410 aa15.51■□□□□ 0.07
LSM2-208ENST00000375661 JARID2Q92833 1246 aaPredicted RBP15.51■□□□□ 0.07
LSM2-208ENST00000375661 E9PSI1 815 aa15.5■□□□□ 0.07
LSM2-208ENST00000375661 IGKV5-2P06315 115 aa15.5■□□□□ 0.07
LSM2-208ENST00000375661 FBXO46Q6PJ61 603 aaPredicted RBP15.5■□□□□ 0.07
LSM2-208ENST00000375661 APOBEC3FQ8IUX4 373 aaKnown RBP15.5■□□□□ 0.07
LSM2-208ENST00000375661 MYH16Q9H6N6 1097 aa15.5■□□□□ 0.07
LSM2-208ENST00000375661 ZBED9Q6R2W3 1325 aa15.49■□□□□ 0.07
LSM2-208ENST00000375661 ALDH1A1P00352 501 aa15.49■□□□□ 0.07
LSM2-208ENST00000375661 IGHMBP2P38935 993 aaKnown RBP15.49■□□□□ 0.07
LSM2-208ENST00000375661 EXOSC9Q06265 439 aaKnown RBP15.49■□□□□ 0.07
LSM2-208ENST00000375661 PRAMEF18Q5VWM3 479 aa15.49■□□□□ 0.07
LSM2-208ENST00000375661 GREM2Q9H772 168 aa15.49■□□□□ 0.07
LSM2-208ENST00000375661 PI4KAP2A4QPH2 592 aa15.48■□□□□ 0.07
LSM2-208ENST00000375661 TTLL5Q6EMB2 1281 aa15.48■□□□□ 0.07
LSM2-208ENST00000375661 PI4KAP1Q8N8J0 262 aa15.48■□□□□ 0.07
LSM2-208ENST00000375661 ANKRD2Q9GZV1 360 aa15.48■□□□□ 0.07
LSM2-208ENST00000375661 SCAF8Q9UPN6 1271 aaKnown RBP15.48■□□□□ 0.07
LSM2-208ENST00000375661 ZNF804BA4D1E1 1349 aa15.47■□□□□ 0.07
LSM2-208ENST00000375661 A0A1B0GUL6 1792 aa15.47■□□□□ 0.07
LSM2-208ENST00000375661 RBBP6Q7Z6E9 1792 aaKnown RBP15.47■□□□□ 0.07
LSM2-208ENST00000375661 WTIPA6NIX2 430 aaPredicted RBP15.47■□□□□ 0.07
LSM2-208ENST00000375661 NEURL1BA8MQ27 555 aa15.47■□□□□ 0.07
LSM2-208ENST00000375661 H7C1W4 665 aa15.47■□□□□ 0.07
LSM2-208ENST00000375661 FKTNO75072 461 aa15.47■□□□□ 0.07
LSM2-208ENST00000375661 INHBEP58166 350 aa15.47■□□□□ 0.07
LSM2-208ENST00000375661 LDLRAD1Q5T700 205 aa15.47■□□□□ 0.07
LSM2-208ENST00000375661 FBXW7Q969H0 707 aa15.47■□□□□ 0.07
LSM2-208ENST00000375661 ZBED3Q96IU2 234 aaPredicted RBP15.47■□□□□ 0.07
LSM2-208ENST00000375661 MXD3Q9BW11 206 aa15.47■□□□□ 0.07
LSM2-208ENST00000375661 PLA2G12BQ9BX93 195 aa15.47■□□□□ 0.07
LSM2-208ENST00000375661 STK31Q9BXU1 1019 aa15.47■□□□□ 0.07
LSM2-208ENST00000375661 UNCXA6NJT0 531 aa15.46■□□□□ 0.07
LSM2-208ENST00000375661 PTPN12Q05209 780 aaKnown RBP15.46■□□□□ 0.07
LSM2-208ENST00000375661 TWISTNBQ3B726 338 aaPredicted RBP15.46■□□□□ 0.07
LSM2-208ENST00000375661 SPRYD7Q5W111 196 aa15.46■□□□□ 0.07
LSM2-208ENST00000375661 MANSC4A6NHS7 340 aaPredicted RBP15.45■□□□□ 0.06
LSM2-208ENST00000375661 VAMP4O75379 141 aa15.45■□□□□ 0.06
LSM2-208ENST00000375661 SASH1O94885 1247 aa15.45■□□□□ 0.06
LSM2-208ENST00000375661 MAP3K11Q16584 847 aa15.45■□□□□ 0.06
LSM2-208ENST00000375661 TXNRD3Q86VQ6 643 aa15.45■□□□□ 0.06
LSM2-208ENST00000375661 MPHOSPH8Q99549 860 aa15.45■□□□□ 0.06
LSM2-208ENST00000375661 PPP2R3BQ9Y5P8 575 aa15.45■□□□□ 0.06
LSM2-208ENST00000375661 ZBTB48P10074 688 aaPredicted RBP15.44■□□□□ 0.06
LSM2-208ENST00000375661 CWF19L2Q2TBE0 894 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms