RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 SNX14Q9Y5W7 946 aa20.78■□□□□ 0.92
PTPDC1-202ENST00000375360 ZFYVE27Q5T4F4 411 aa20.78■□□□□ 0.92
PTPDC1-202ENST00000375360 FAM173BQ6P4H8 233 aa20.78■□□□□ 0.92
PTPDC1-202ENST00000375360 CABP5Q9NP86 173 aa20.78■□□□□ 0.92
PTPDC1-202ENST00000375360 UFL1O94874 794 aa20.78■□□□□ 0.92
PTPDC1-202ENST00000375360 DDX19AQ9NUU7 478 aaKnown RBP20.78■□□□□ 0.92
PTPDC1-202ENST00000375360 SLC27A2O14975 620 aa20.77■□□□□ 0.92
PTPDC1-202ENST00000375360 SYT1P21579 422 aa20.77■□□□□ 0.92
PTPDC1-202ENST00000375360 HIBADHP31937 336 aaKnown RBP20.77■□□□□ 0.92
PTPDC1-202ENST00000375360 ZSCAN16Q9H4T2 348 aaPredicted RBP20.77■□□□□ 0.92
PTPDC1-202ENST00000375360 RBM26Q5T8P6 1007 aaKnown RBP20.77■□□□□ 0.92
PTPDC1-202ENST00000375360 TMTC2Q8N394 836 aa20.77■□□□□ 0.92
PTPDC1-202ENST00000375360 OGFOD1Q8N543 542 aa20.77■□□□□ 0.92
PTPDC1-202ENST00000375360 ANKRD2Q9GZV1 360 aa20.77■□□□□ 0.92
PTPDC1-202ENST00000375360 ZNF165P49910 485 aa20.77■□□□□ 0.92
PTPDC1-202ENST00000375360 NCOA5Q9HCD5 579 aaKnown RBP20.77■□□□□ 0.92
PTPDC1-202ENST00000375360 PTPDC1A2A3K4 754 aa20.77■□□□□ 0.91
PTPDC1-202ENST00000375360 SMTNL1A8MU46 457 aa20.77■□□□□ 0.91
PTPDC1-202ENST00000375360 SEC62Q99442 399 aaKnown RBP20.77■□□□□ 0.91
PTPDC1-202ENST00000375360 ZNHIT6Q9NWK9 470 aaKnown RBP20.77■□□□□ 0.91
PTPDC1-202ENST00000375360 TTLL12Q14166 644 aaPredicted RBP20.76■□□□□ 0.91
PTPDC1-202ENST00000375360 DACT1Q9NYF0 836 aa20.76■□□□□ 0.91
PTPDC1-202ENST00000375360 IDEP14735 1019 aa20.76■□□□□ 0.91
PTPDC1-202ENST00000375360 RAD50Q92878 1312 aa20.76■□□□□ 0.91
PTPDC1-202ENST00000375360 CYP27B1O15528 508 aa20.76■□□□□ 0.91
PTPDC1-202ENST00000375360 UBA7P41226 1012 aa20.76■□□□□ 0.91
PTPDC1-202ENST00000375360 LPIN2Q92539 896 aa20.76■□□□□ 0.91
PTPDC1-202ENST00000375360 APPBP2Q92624 585 aa20.76■□□□□ 0.91
PTPDC1-202ENST00000375360 ZSCAN23Q3MJ62 389 aa20.75■□□□□ 0.91
PTPDC1-202ENST00000375360 PUS3Q9BZE2 481 aaKnown RBP20.75■□□□□ 0.91
PTPDC1-202ENST00000375360 HELLSQ9NRZ9 838 aa20.75■□□□□ 0.91
PTPDC1-202ENST00000375360 UNC13BO14795 1591 aa20.74■□□□□ 0.91
PTPDC1-202ENST00000375360 SIRT2Q8IXJ6 389 aa20.74■□□□□ 0.91
PTPDC1-202ENST00000375360 DEF6Q9H4E7 631 aa20.74■□□□□ 0.91
PTPDC1-202ENST00000375360 VEZTQ9HBM0 779 aa20.74■□□□□ 0.91
PTPDC1-202ENST00000375360 KDRP35968 1356 aa20.74■□□□□ 0.91
PTPDC1-202ENST00000375360 RAB3GAP1Q15042 981 aa20.74■□□□□ 0.91
PTPDC1-202ENST00000375360 TRPM1Q7Z4N2 1603 aa20.74■□□□□ 0.91
PTPDC1-202ENST00000375360 EIF5P55010 431 aaKnown RBP20.74■□□□□ 0.91
PTPDC1-202ENST00000375360 HEATR3Q7Z4Q2 680 aa20.74■□□□□ 0.91
PTPDC1-202ENST00000375360 UNC5CLQ8IV45 518 aa20.74■□□□□ 0.91
PTPDC1-202ENST00000375360 ALKQ9UM73 1620 aa20.74■□□□□ 0.91
PTPDC1-202ENST00000375360 GNAT2P19087 354 aa20.73■□□□□ 0.91
PTPDC1-202ENST00000375360 UBA5Q9GZZ9 404 aa20.73■□□□□ 0.91
PTPDC1-202ENST00000375360 SAP30BPQ9UHR5 308 aaKnown RBP20.73■□□□□ 0.91
PTPDC1-202ENST00000375360 ABCA9Q8IUA7 1624 aa20.73■□□□□ 0.91
PTPDC1-202ENST00000375360 LRRIQ1Q96JM4 1722 aa20.73■□□□□ 0.91
PTPDC1-202ENST00000375360 APBA3O96018 575 aa20.73■□□□□ 0.91
PTPDC1-202ENST00000375360 HSP90AA4PQ58FG1 418 aa20.73■□□□□ 0.91
PTPDC1-202ENST00000375360 CBFA2T2O43439 604 aa20.73■□□□□ 0.91
PTPDC1-202ENST00000375360 NOM1Q5C9Z4 860 aaKnown RBP20.73■□□□□ 0.91
PTPDC1-202ENST00000375360 CAGE1Q8TC20 777 aa20.73■□□□□ 0.91
PTPDC1-202ENST00000375360 CHMP4BP1P59074 171 aa20.72■□□□□ 0.91
PTPDC1-202ENST00000375360 RPS8P62241 208 aaKnown RBP20.72■□□□□ 0.91
PTPDC1-202ENST00000375360 DENND2AQ9ULE3 1009 aa20.72■□□□□ 0.91
PTPDC1-202ENST00000375360 CTSWP56202 376 aa20.72■□□□□ 0.91
PTPDC1-202ENST00000375360 ATP5JP18859 108 aa20.72■□□□□ 0.91
PTPDC1-202ENST00000375360 GREM2Q9H772 168 aa20.72■□□□□ 0.91
PTPDC1-202ENST00000375360 SPATA31A3Q5VYP0 1347 aa20.72■□□□□ 0.91
PTPDC1-202ENST00000375360 CCDC102BQ68D86 513 aa20.72■□□□□ 0.91
PTPDC1-202ENST00000375360 PALD1Q9ULE6 856 aa20.72■□□□□ 0.91
PTPDC1-202ENST00000375360 A0A0D9SFI3 127 aa20.71■□□□□ 0.91
PTPDC1-202ENST00000375360 RPS6KB1P23443 525 aa20.71■□□□□ 0.91
PTPDC1-202ENST00000375360 ZBTB38Q8NAP3 1195 aaPredicted RBP20.71■□□□□ 0.91
PTPDC1-202ENST00000375360 CPLX3Q8WVH0 158 aa20.71■□□□□ 0.91
PTPDC1-202ENST00000375360 TCP11L1Q9NUJ3 509 aa20.71■□□□□ 0.91
PTPDC1-202ENST00000375360 OTUD7BQ6GQQ9 843 aa20.71■□□□□ 0.91
PTPDC1-202ENST00000375360 PIGBQ92521 554 aa20.71■□□□□ 0.91
PTPDC1-202ENST00000375360 AATFQ9NY61 560 aaKnown RBP eCLIP20.71■□□□□ 0.91
PTPDC1-202ENST00000375360 CTAGE5O15320 804 aa20.71■□□□□ 0.91
PTPDC1-202ENST00000375360 SYKP43405 635 aa20.71■□□□□ 0.91
PTPDC1-202ENST00000375360 PTH1RQ03431 593 aa20.71■□□□□ 0.91
PTPDC1-202ENST00000375360 TLR7Q9NYK1 1049 aaKnown RBP20.71■□□□□ 0.91
PTPDC1-202ENST00000375360 ZNF532Q9HCE3 1301 aa20.71■□□□□ 0.91
PTPDC1-202ENST00000375360 CRKLP46109 303 aaKnown RBP20.7■□□□□ 0.9
PTPDC1-202ENST00000375360 INTS4Q96HW7 963 aaKnown RBP20.7■□□□□ 0.9
PTPDC1-202ENST00000375360 MYL10Q9BUA6 226 aa20.7■□□□□ 0.9
PTPDC1-202ENST00000375360 RAB34Q9BZG1 259 aa20.7■□□□□ 0.9
PTPDC1-202ENST00000375360 AFMP43652 599 aa20.7■□□□□ 0.9
PTPDC1-202ENST00000375360 CCDC12Q8WUD4 166 aaPredicted RBP20.7■□□□□ 0.9
PTPDC1-202ENST00000375360 CUL5Q93034 780 aa20.7■□□□□ 0.9
PTPDC1-202ENST00000375360 DNAJC5Q9H3Z4 198 aa20.7■□□□□ 0.9
PTPDC1-202ENST00000375360 MYO1BO43795 1136 aa20.7■□□□□ 0.9
PTPDC1-202ENST00000375360 GYG1P46976 350 aa20.7■□□□□ 0.9
PTPDC1-202ENST00000375360 TMEM266Q2M3C6 531 aa20.7■□□□□ 0.9
PTPDC1-202ENST00000375360 USPL1Q5W0Q7 1092 aa20.7■□□□□ 0.9
PTPDC1-202ENST00000375360 ZSCAN30Q86W11 494 aa20.7■□□□□ 0.9
PTPDC1-202ENST00000375360 SPATA5Q8NB90 893 aa20.7■□□□□ 0.9
PTPDC1-202ENST00000375360 CDK12Q9NYV4 1490 aaPredicted RBP20.7■□□□□ 0.9
PTPDC1-202ENST00000375360 SFPQP23246 707 aaKnown RBP eCLIP20.69■□□□□ 0.9
PTPDC1-202ENST00000375360 ODF2Q5BJF6 829 aa20.69■□□□□ 0.9
PTPDC1-202ENST00000375360 MSL1Q68DK7 614 aa20.69■□□□□ 0.9
PTPDC1-202ENST00000375360 TEX11Q8IYF3 940 aa20.69■□□□□ 0.9
PTPDC1-202ENST00000375360 PDCL3Q9H2J4 239 aa20.69■□□□□ 0.9
PTPDC1-202ENST00000375360 SPHKAPQ2M3C7 1700 aa20.69■□□□□ 0.9
PTPDC1-202ENST00000375360 GIGYF2Q6Y7W6 1299 aaKnown RBP20.69■□□□□ 0.9
PTPDC1-202ENST00000375360 GLI2P10070 1586 aa20.69■□□□□ 0.9
PTPDC1-202ENST00000375360 AOX1Q06278 1338 aa20.69■□□□□ 0.9
PTPDC1-202ENST00000375360 RBM17Q96I25 401 aaKnown RBP20.68■□□□□ 0.9
PTPDC1-202ENST00000375360 KIF24Q5T7B8 1368 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms