RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 FOXD4L4Q8WXT5 416 aaPredicted RBP9.73□□□□□ -0.85
UBR4-202ENST00000375224 CHMP4CQ96CF2 233 aa9.73□□□□□ -0.85
UBR4-202ENST00000375224 ZNF512BQ96KM6 892 aaPredicted RBP9.73□□□□□ -0.85
UBR4-202ENST00000375224 TBC1D2BQ9UPU7 963 aa9.73□□□□□ -0.85
UBR4-202ENST00000375224 A0A0G2JS52 829 aa9.73□□□□□ -0.85
UBR4-202ENST00000375224 ZNF445P59923 1031 aa9.73□□□□□ -0.85
UBR4-202ENST00000375224 ZSCAN25Q6NSZ9 544 aa9.73□□□□□ -0.85
UBR4-202ENST00000375224 SYAP1Q96A49 352 aaPredicted RBP9.73□□□□□ -0.85
UBR4-202ENST00000375224 NDUFB9Q9Y6M9 179 aa9.73□□□□□ -0.85
UBR4-202ENST00000375224 SYT1P21579 422 aa9.73□□□□□ -0.85
UBR4-202ENST00000375224 GJB2P29033 226 aa9.73□□□□□ -0.85
UBR4-202ENST00000375224 CRKLP46109 303 aaKnown RBP9.73□□□□□ -0.85
UBR4-202ENST00000375224 ME3Q16798 604 aa9.73□□□□□ -0.85
UBR4-202ENST00000375224 INTS5Q6P9B9 1019 aaKnown RBP9.73□□□□□ -0.85
UBR4-202ENST00000375224 GREM2Q9H772 168 aa9.73□□□□□ -0.85
UBR4-202ENST00000375224 CTNNA3Q9UI47 895 aa9.73□□□□□ -0.85
UBR4-202ENST00000375224 RREB1Q92766 1687 aa9.72□□□□□ -0.85
UBR4-202ENST00000375224 FKBP4Q02790 459 aaKnown RBP eCLIP9.72□□□□□ -0.85
UBR4-202ENST00000375224 TTF1Q15361 905 aaPredicted RBP9.72□□□□□ -0.85
UBR4-202ENST00000375224 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.72□□□□□ -0.85
UBR4-202ENST00000375224 CCDC85AQ96PX6 553 aaPredicted RBP9.72□□□□□ -0.85
UBR4-202ENST00000375224 UTP14AQ9BVJ6 771 aaKnown RBP9.72□□□□□ -0.85
UBR4-202ENST00000375224 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.72□□□□□ -0.858e-12■■■■□ 22.7
UBR4-202ENST00000375224 MROH5Q6ZUA9 1318 aa9.72□□□□□ -0.85
UBR4-202ENST00000375224 MAPK8IP2Q13387 824 aaPredicted RBP9.72□□□□□ -0.85
UBR4-202ENST00000375224 CAVIN1Q6NZI2 390 aaKnown RBP9.72□□□□□ -0.85
UBR4-202ENST00000375224 CCDC129Q6ZRS4 1044 aa9.72□□□□□ -0.85
UBR4-202ENST00000375224 ACSBG1Q96GR2 724 aa9.72□□□□□ -0.85
UBR4-202ENST00000375224 SEC62Q99442 399 aaKnown RBP9.72□□□□□ -0.85
UBR4-202ENST00000375224 TPCN1Q9ULQ1 816 aa9.72□□□□□ -0.85
UBR4-202ENST00000375224 ZNF652Q9Y2D9 606 aa9.72□□□□□ -0.85
UBR4-202ENST00000375224 LETM1O95202 739 aaPredicted RBP9.72□□□□□ -0.85
UBR4-202ENST00000375224 F13A1P00488 732 aa9.72□□□□□ -0.85
UBR4-202ENST00000375224 TMEM87AQ8NBN3 555 aa9.72□□□□□ -0.85
UBR4-202ENST00000375224 LARGE1O95461 756 aa9.71□□□□□ -0.85
UBR4-202ENST00000375224 CYP21A2P08686 494 aa9.71□□□□□ -0.85
UBR4-202ENST00000375224 UQCRFS1P1P0C7P4 283 aa9.71□□□□□ -0.85
UBR4-202ENST00000375224 PIP4K2BP78356 416 aa9.71□□□□□ -0.85
UBR4-202ENST00000375224 LARP6Q9BRS8 491 aaKnown RBP9.71□□□□□ -0.85
UBR4-202ENST00000375224 RIC1Q4ADV7 1423 aa9.71□□□□□ -0.85
UBR4-202ENST00000375224 PDE8BO95263 885 aa9.71□□□□□ -0.86
UBR4-202ENST00000375224 CHRM1P11229 460 aaPredicted RBP9.71□□□□□ -0.86
UBR4-202ENST00000375224 ADORA1P30542 326 aa9.71□□□□□ -0.86
UBR4-202ENST00000375224 GTPBP4Q9BZE4 634 aaKnown RBP9.71□□□□□ -0.86
UBR4-202ENST00000375224 ZNF831Q5JPB2 1677 aa9.71□□□□□ -0.86
UBR4-202ENST00000375224 UBN2Q6ZU65 1347 aa9.71□□□□□ -0.86
UBR4-202ENST00000375224 RGL2O15211 777 aa9.7□□□□□ -0.86
UBR4-202ENST00000375224 HSPD1P10809 573 aaKnown RBP9.7□□□□□ -0.86
UBR4-202ENST00000375224 TOB2Q14106 344 aaPredicted RBP9.7□□□□□ -0.86
UBR4-202ENST00000375224 ZSCAN23Q3MJ62 389 aa9.7□□□□□ -0.86
UBR4-202ENST00000375224 SYNE4Q8N205 404 aa9.7□□□□□ -0.86
UBR4-202ENST00000375224 GPT2Q8TD30 523 aa9.7□□□□□ -0.86
UBR4-202ENST00000375224 APPBP2Q92624 585 aa9.7□□□□□ -0.86
UBR4-202ENST00000375224 MAST3O60307 1309 aa9.7□□□□□ -0.86
UBR4-202ENST00000375224 PATL2C9JE40 543 aaKnown RBP9.7□□□□□ -0.86
UBR4-202ENST00000375224 PHF14O94880 888 aa9.7□□□□□ -0.86
UBR4-202ENST00000375224 MSNP26038 577 aaKnown RBP9.7□□□□□ -0.86
UBR4-202ENST00000375224 VPS72Q15906 364 aa9.7□□□□□ -0.86
UBR4-202ENST00000375224 CCDC152Q4G0S7 254 aa9.7□□□□□ -0.86
UBR4-202ENST00000375224 LARP1BQ659C4 914 aaKnown RBP9.7□□□□□ -0.86
UBR4-202ENST00000375224 DHX32Q7L7V1 743 aaKnown RBP9.7□□□□□ -0.86
UBR4-202ENST00000375224 LPIN2Q92539 896 aa9.7□□□□□ -0.86
UBR4-202ENST00000375224 CAMTA2O94983 1202 aa9.7□□□□□ -0.86
UBR4-202ENST00000375224 PUM3Q15397 648 aaKnown RBP9.7□□□□□ -0.86
UBR4-202ENST00000375224 WASHC4Q2M389 1173 aa9.7□□□□□ -0.86
UBR4-202ENST00000375224 CLEC4GQ6UXB4 293 aa9.7□□□□□ -0.86
UBR4-202ENST00000375224 RTL9Q8NET4 1388 aa9.7□□□□□ -0.86
UBR4-202ENST00000375224 MYH7P12883 1935 aa9.69□□□□□ -0.86
UBR4-202ENST00000375224 CLGNO14967 610 aa9.69□□□□□ -0.86
UBR4-202ENST00000375224 SUSD4Q5VX71 490 aa9.69□□□□□ -0.86
UBR4-202ENST00000375224 Q6ZUG5 572 aa9.69□□□□□ -0.86
UBR4-202ENST00000375224 VGLL2Q8N8G2 317 aa9.69□□□□□ -0.86
UBR4-202ENST00000375224 NECAB1Q8N987 351 aa9.69□□□□□ -0.86
UBR4-202ENST00000375224 MPHOSPH8Q99549 860 aa9.69□□□□□ -0.86
UBR4-202ENST00000375224 MTMR6Q9Y217 621 aa9.69□□□□□ -0.86
UBR4-202ENST00000375224 SLC5A1P13866 664 aa9.69□□□□□ -0.86
UBR4-202ENST00000375224 ZAP70P43403 619 aa9.69□□□□□ -0.86
UBR4-202ENST00000375224 ITPK1Q13572 414 aa9.69□□□□□ -0.86
UBR4-202ENST00000375224 RGS22Q8NE09 1264 aa9.69□□□□□ -0.86
UBR4-202ENST00000375224 KIF3AQ9Y496 699 aa9.69□□□□□ -0.86
UBR4-202ENST00000375224 IMMTQ16891 758 aaKnown RBP9.69□□□□□ -0.86
UBR4-202ENST00000375224 USP48Q86UV5 1035 aa9.69□□□□□ -0.86
UBR4-202ENST00000375224 GAS2L3Q86XJ1 694 aa9.69□□□□□ -0.86
UBR4-202ENST00000375224 CNKSR2Q8WXI2 1034 aa9.69□□□□□ -0.86
UBR4-202ENST00000375224 NGLY1Q96IV0 654 aa9.69□□□□□ -0.86
UBR4-202ENST00000375224 LLPHQ9BRT6 129 aaKnown RBP9.69□□□□□ -0.86
UBR4-202ENST00000375224 LRP5O75197 1615 aa9.68□□□□□ -0.86
UBR4-202ENST00000375224 ARID4AP29374 1257 aaPredicted RBP9.68□□□□□ -0.86
UBR4-202ENST00000375224 IGHMBP2P38935 993 aaKnown RBP9.68□□□□□ -0.86
UBR4-202ENST00000375224 GTF3C6Q969F1 213 aa9.68□□□□□ -0.86
UBR4-202ENST00000375224 OSBP2Q969R2 916 aa9.68□□□□□ -0.86
UBR4-202ENST00000375224 NIP7Q9Y221 180 aaKnown RBP eCLIP9.68□□□□□ -0.86
UBR4-202ENST00000375224 TAF6LQ9Y6J9 622 aa9.68□□□□□ -0.86
UBR4-202ENST00000375224 VPS37CA5D8V6 355 aaPredicted RBP9.68□□□□□ -0.86
UBR4-202ENST00000375224 M0R2C6 588 aa9.68□□□□□ -0.86
UBR4-202ENST00000375224 ST3GAL1Q11201 340 aa9.68□□□□□ -0.86
UBR4-202ENST00000375224 PANK2Q9BZ23 570 aa9.68□□□□□ -0.86
UBR4-202ENST00000375224 E7EWF7 191 aa9.68□□□□□ -0.86
UBR4-202ENST00000375224 CHGBP05060 677 aa9.68□□□□□ -0.86
UBR4-202ENST00000375224 UBE2HP62256 183 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms