RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 KLRG1Q96E93 195 aa26.16■■□□□ 1.78
MAP1LC3A-202ENST00000374837 COPRSQ9NQ92 184 aa26.16■■□□□ 1.78
MAP1LC3A-202ENST00000374837 IRS2Q9Y4H2 1338 aa26.15■■□□□ 1.78
MAP1LC3A-202ENST00000374837 CAPN15O75808 1086 aa26.15■■□□□ 1.78
MAP1LC3A-202ENST00000374837 UBE4AQ14139 1066 aa26.15■■□□□ 1.78
MAP1LC3A-202ENST00000374837 ATG9AQ7Z3C6 839 aa26.15■■□□□ 1.78
MAP1LC3A-202ENST00000374837 PODNQ7Z5L7 613 aa26.15■■□□□ 1.78
MAP1LC3A-202ENST00000374837 SIL1Q9H173 461 aa26.15■■□□□ 1.78
MAP1LC3A-202ENST00000374837 PNMA6EA0A0J9YXQ4 647 aa26.14■■□□□ 1.78
MAP1LC3A-202ENST00000374837 PSMD14O00487 310 aa26.14■■□□□ 1.78
MAP1LC3A-202ENST00000374837 VGLL2Q8N8G2 317 aa26.14■■□□□ 1.78
MAP1LC3A-202ENST00000374837 COA1Q9GZY4 146 aa26.14■■□□□ 1.78
MAP1LC3A-202ENST00000374837 FBXO3Q9UK99 471 aa26.14■■□□□ 1.78
MAP1LC3A-202ENST00000374837 IQCA1LA6NCM1 817 aa26.13■■□□□ 1.77
MAP1LC3A-202ENST00000374837 CIAO1O76071 339 aa26.13■■□□□ 1.77
MAP1LC3A-202ENST00000374837 SCNN1DP51172 638 aa26.13■■□□□ 1.77
MAP1LC3A-202ENST00000374837 ATP8B2P98198 1209 aa26.13■■□□□ 1.77
MAP1LC3A-202ENST00000374837 HACL1Q9UJ83 578 aa26.13■■□□□ 1.77
MAP1LC3A-202ENST00000374837 DDX19BQ9UMR2 479 aa26.13■■□□□ 1.77
MAP1LC3A-202ENST00000374837 PDE8BO95263 885 aa26.12■■□□□ 1.77
MAP1LC3A-202ENST00000374837 GMPSP49915 693 aaPredicted RBP26.12■■□□□ 1.77
MAP1LC3A-202ENST00000374837 JMYQ8N9B5 988 aa26.12■■□□□ 1.77
MAP1LC3A-202ENST00000374837 TAF1DQ9H5J8 278 aaPredicted RBP26.12■■□□□ 1.77
MAP1LC3A-202ENST00000374837 FSTL1Q12841 308 aa26.11■■□□□ 1.77
MAP1LC3A-202ENST00000374837 ZBTB12Q9Y330 459 aaPredicted RBP26.11■■□□□ 1.77
MAP1LC3A-202ENST00000374837 VIL1P09327 827 aaKnown RBP26.1■■□□□ 1.77
MAP1LC3A-202ENST00000374837 IL15P40933 162 aaPredicted RBP26.1■■□□□ 1.77
MAP1LC3A-202ENST00000374837 EPS15P42566 896 aa26.1■■□□□ 1.77
MAP1LC3A-202ENST00000374837 CD209Q9NNX6 404 aa26.1■■□□□ 1.77
MAP1LC3A-202ENST00000374837 LMOD1P29536 600 aaPredicted RBP26.09■■□□□ 1.77
MAP1LC3A-202ENST00000374837 EPHX2P34913 555 aa26.09■■□□□ 1.77
MAP1LC3A-202ENST00000374837 POLA2Q14181 598 aa26.09■■□□□ 1.77
MAP1LC3A-202ENST00000374837 ZBTB40Q9NUA8 1239 aa26.09■■□□□ 1.77
MAP1LC3A-202ENST00000374837 USP17L3A6NCW0 530 aa26.08■■□□□ 1.77
MAP1LC3A-202ENST00000374837 USP17L4A6NCW7 530 aa26.08■■□□□ 1.77
MAP1LC3A-202ENST00000374837 RRP1P56182 461 aaKnown RBP26.08■■□□□ 1.77
MAP1LC3A-202ENST00000374837 USP17L1Q7RTZ2 530 aa26.08■■□□□ 1.77
MAP1LC3A-202ENST00000374837 SSH3Q8TE77 659 aa26.08■■□□□ 1.77
MAP1LC3A-202ENST00000374837 GPRC5DQ9NZD1 345 aa26.08■■□□□ 1.77
MAP1LC3A-202ENST00000374837 CEP126Q9P2H0 1117 aa26.08■■□□□ 1.77
MAP1LC3A-202ENST00000374837 FGFR2P21802 821 aa26.07■■□□□ 1.76
MAP1LC3A-202ENST00000374837 ZNF804AQ7Z570 1209 aa26.07■■□□□ 1.76
MAP1LC3A-202ENST00000374837 FAM84BQ96KN1 310 aaPredicted RBP26.07■■□□□ 1.76
MAP1LC3A-202ENST00000374837 GYG1P46976 350 aa26.06■■□□□ 1.76
MAP1LC3A-202ENST00000374837 PUM3Q15397 648 aaKnown RBP26.06■■□□□ 1.76
MAP1LC3A-202ENST00000374837 CEP85Q6P2H3 762 aa26.06■■□□□ 1.76
MAP1LC3A-202ENST00000374837 TNS4Q8IZW8 715 aa26.06■■□□□ 1.76
MAP1LC3A-202ENST00000374837 DPF2Q92785 391 aa26.06■■□□□ 1.76
MAP1LC3A-202ENST00000374837 CHMP4BQ9H444 224 aaKnown RBP26.06■■□□□ 1.76
MAP1LC3A-202ENST00000374837 POTEIP0CG38 1075 aa26.05■■□□□ 1.76
MAP1LC3A-202ENST00000374837 POTEJP0CG39 1038 aa26.05■■□□□ 1.76
MAP1LC3A-202ENST00000374837 IL1R1P14778 569 aa26.05■■□□□ 1.76
MAP1LC3A-202ENST00000374837 RPS12P25398 132 aaKnown RBP26.05■■□□□ 1.76
MAP1LC3A-202ENST00000374837 HIBADHP31937 336 aaKnown RBP26.05■■□□□ 1.76
MAP1LC3A-202ENST00000374837 RSBN1LQ6PCB5 846 aaPredicted RBP26.05■■□□□ 1.76
MAP1LC3A-202ENST00000374837 CNOT7Q9UIV1 285 aaKnown RBP26.05■■□□□ 1.76
MAP1LC3A-202ENST00000374837 SHTN1A0MZ66 631 aa26.04■■□□□ 1.76
MAP1LC3A-202ENST00000374837 IFIT1P09914 478 aaKnown RBP26.04■■□□□ 1.76
MAP1LC3A-202ENST00000374837 EAPPQ56P03 285 aaPredicted RBP26.04■■□□□ 1.76
MAP1LC3A-202ENST00000374837 DACT2Q5SW24 774 aa26.04■■□□□ 1.76
MAP1LC3A-202ENST00000374837 STRIP1Q5VSL9 837 aa26.04■■□□□ 1.76
MAP1LC3A-202ENST00000374837 TTLL5Q6EMB2 1281 aa26.04■■□□□ 1.76
MAP1LC3A-202ENST00000374837 FBXO33Q7Z6M2 555 aa26.04■■□□□ 1.76
MAP1LC3A-202ENST00000374837 LPIN2Q92539 896 aa26.04■■□□□ 1.76
MAP1LC3A-202ENST00000374837 FBXW7Q969H0 707 aa26.04■■□□□ 1.76
MAP1LC3A-202ENST00000374837 GTF2IP78347 998 aa26.03■■□□□ 1.76
MAP1LC3A-202ENST00000374837 G3BP1Q13283 466 aaKnown RBP eCLIP26.03■■□□□ 1.76
MAP1LC3A-202ENST00000374837 PNMA8AQ86V59 439 aaPredicted RBP26.03■■□□□ 1.76
MAP1LC3A-202ENST00000374837 MXD3Q9BW11 206 aa26.03■■□□□ 1.76
MAP1LC3A-202ENST00000374837 SLC5A1P13866 664 aa26.02■■□□□ 1.76
MAP1LC3A-202ENST00000374837 TFCP2Q12800 502 aa26.02■■□□□ 1.76
MAP1LC3A-202ENST00000374837 MICALL2Q8IY33 904 aa26.02■■□□□ 1.76
MAP1LC3A-202ENST00000374837 AGBL3Q8NEM8 1001 aa26.02■■□□□ 1.76
MAP1LC3A-202ENST00000374837 TDRD7Q8NHU6 1098 aaKnown RBP26.02■■□□□ 1.76
MAP1LC3A-202ENST00000374837 GMLQ99445 158 aa26.02■■□□□ 1.76
MAP1LC3A-202ENST00000374837 ADARB2Q9NS39 739 aaKnown RBP26.02■■□□□ 1.76
MAP1LC3A-202ENST00000374837 A0A1B0GUL6 1792 aa26.02■■□□□ 1.76
MAP1LC3A-202ENST00000374837 H7C1D1 291 aa26.01■■□□□ 1.75
MAP1LC3A-202ENST00000374837 BCAMP50895 628 aa26.01■■□□□ 1.75
MAP1LC3A-202ENST00000374837 ATP2B3Q16720 1220 aa26.01■■□□□ 1.75
MAP1LC3A-202ENST00000374837 SMC1BQ8NDV3 1235 aa26.01■■□□□ 1.75
MAP1LC3A-202ENST00000374837 SCN9AQ15858 1988 aa26■■□□□ 1.75
MAP1LC3A-202ENST00000374837 SURF6O75683 361 aaKnown RBP26■■□□□ 1.75
MAP1LC3A-202ENST00000374837 CAVIN4Q5BKX8 364 aa26■■□□□ 1.75
MAP1LC3A-202ENST00000374837 USP50Q70EL3 339 aaPredicted RBP26■■□□□ 1.75
MAP1LC3A-202ENST00000374837 LDHDQ86WU2 507 aa26■■□□□ 1.75
MAP1LC3A-202ENST00000374837 VPS37DQ86XT2 251 aa26■■□□□ 1.75
MAP1LC3A-202ENST00000374837 RPAP2Q8IXW5 612 aaPredicted RBP26■■□□□ 1.75
MAP1LC3A-202ENST00000374837 CLEC11AQ9Y240 323 aa26■■□□□ 1.75
MAP1LC3A-202ENST00000374837 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26■■□□□ 1.75
MAP1LC3A-202ENST00000374837 SCN4AP35499 1836 aa26■■□□□ 1.75
MAP1LC3A-202ENST00000374837 SASH1O94885 1247 aa25.99■■□□□ 1.75
MAP1LC3A-202ENST00000374837 CHADLQ6NUI6 762 aa25.99■■□□□ 1.75
MAP1LC3A-202ENST00000374837 NOP58Q9Y2X3 529 aaKnown RBP25.99■■□□□ 1.75
MAP1LC3A-202ENST00000374837 PCNTO95613 3336 aa25.99■■□□□ 1.75
MAP1LC3A-202ENST00000374837 SAMD7Q7Z3H4 446 aa25.98■■□□□ 1.75
MAP1LC3A-202ENST00000374837 TRPM4Q8TD43 1214 aa25.98■■□□□ 1.75
MAP1LC3A-202ENST00000374837 HIRAP54198 1017 aaPredicted RBP25.97■■□□□ 1.75
MAP1LC3A-202ENST00000374837 TIMM10P62072 90 aa25.97■■□□□ 1.75
MAP1LC3A-202ENST00000374837 SIRT2Q8IXJ6 389 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms