RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 CCT2P78371 535 aaKnown RBP21.69■■□□□ 1.06
RXRB-202ENST00000374685 USPL1Q5W0Q7 1092 aa21.69■■□□□ 1.06
RXRB-202ENST00000374685 RIPOR2Q9Y4F9 1068 aa21.69■■□□□ 1.06
RXRB-202ENST00000374685 KRT32Q14532 448 aa21.68■■□□□ 1.06
RXRB-202ENST00000374685 ANKRD1Q15327 319 aa21.68■■□□□ 1.06
RXRB-202ENST00000374685 INTS5Q6P9B9 1019 aaKnown RBP21.68■■□□□ 1.06
RXRB-202ENST00000374685 SH3TC1Q8TE82 1336 aa21.68■■□□□ 1.06
RXRB-202ENST00000374685 COL16A1Q07092 1604 aaPredicted RBP21.68■■□□□ 1.06
RXRB-202ENST00000374685 MCAMP43121 646 aa21.67■■□□□ 1.06
RXRB-202ENST00000374685 APOBRQ0VD83 1088 aa21.67■■□□□ 1.06
RXRB-202ENST00000374685 RAB11FIP4Q86YS3 637 aa21.67■■□□□ 1.06
RXRB-202ENST00000374685 NGLY1Q96IV0 654 aa21.67■■□□□ 1.06
RXRB-202ENST00000374685 PUS7LQ9H0K6 701 aaKnown RBP21.67■■□□□ 1.06
RXRB-202ENST00000374685 HELLSQ9NRZ9 838 aa21.67■■□□□ 1.06
RXRB-202ENST00000374685 NIP7Q9Y221 180 aaKnown RBP eCLIP21.67■■□□□ 1.06
RXRB-202ENST00000374685 PDE8AO60658 829 aa21.67■■□□□ 1.06
RXRB-202ENST00000374685 MBD3O95983 291 aa21.67■■□□□ 1.06
RXRB-202ENST00000374685 PHKA1P46020 1223 aa21.66■■□□□ 1.06
RXRB-202ENST00000374685 PTF1AQ7RTS3 328 aa21.66■■□□□ 1.06
RXRB-202ENST00000374685 TRIM44Q96DX7 344 aaPredicted RBP21.66■■□□□ 1.06
RXRB-202ENST00000374685 PLA2G12BQ9BX93 195 aa21.66■■□□□ 1.06
RXRB-202ENST00000374685 GPHNQ9NQX3 736 aaPredicted RBP21.66■■□□□ 1.06
RXRB-202ENST00000374685 PALLDQ8WX93 1383 aa21.66■■□□□ 1.06
RXRB-202ENST00000374685 NCOA5Q9HCD5 579 aaKnown RBP21.65■■□□□ 1.06
RXRB-202ENST00000374685 TFIP11Q9UBB9 837 aaKnown RBP21.65■■□□□ 1.06
RXRB-202ENST00000374685 APPP05067 770 aa21.65■■□□□ 1.06
RXRB-202ENST00000374685 EIF5P55010 431 aaKnown RBP21.65■■□□□ 1.06
RXRB-202ENST00000374685 ZNF445P59923 1031 aa21.65■■□□□ 1.06
RXRB-202ENST00000374685 ANP32BQ92688 251 aaKnown RBP21.65■■□□□ 1.06
RXRB-202ENST00000374685 MPHOSPH8Q99549 860 aa21.65■■□□□ 1.06
RXRB-202ENST00000374685 E7EWF7 191 aa21.64■■□□□ 1.05
RXRB-202ENST00000374685 SLC9C2Q5TAH2 1124 aa21.64■■□□□ 1.05
RXRB-202ENST00000374685 IQSEC3Q9UPP2 1182 aaPredicted RBP21.64■■□□□ 1.05
RXRB-202ENST00000374685 RIC1Q4ADV7 1423 aa21.63■■□□□ 1.05
RXRB-202ENST00000374685 CDHR2Q9BYE9 1310 aa21.63■■□□□ 1.05
RXRB-202ENST00000374685 ZNF34Q8IZ26 560 aa21.63■■□□□ 1.05
RXRB-202ENST00000374685 ATP6V1DQ9Y5K8 247 aa21.63■■□□□ 1.05
RXRB-202ENST00000374685 JCADQ9P266 1359 aa21.63■■□□□ 1.05
RXRB-202ENST00000374685 UBAP1LF5GYI3 381 aa21.63■■□□□ 1.05
RXRB-202ENST00000374685 SPATA31A5Q5VU36 1347 aa21.62■■□□□ 1.05
RXRB-202ENST00000374685 SPATA31A7Q8IWB4 1347 aa21.62■■□□□ 1.05
RXRB-202ENST00000374685 PDE8BO95263 885 aa21.62■■□□□ 1.05
RXRB-202ENST00000374685 TSGA10IPQ3SY00 556 aa21.62■■□□□ 1.05
RXRB-202ENST00000374685 CCDC24Q8N4L8 307 aa21.62■■□□□ 1.05
RXRB-202ENST00000374685 UTP14AQ9BVJ6 771 aaKnown RBP21.62■■□□□ 1.05
RXRB-202ENST00000374685 DOT1LQ8TEK3 1739 aa21.62■■□□□ 1.05
RXRB-202ENST00000374685 ERVV-1B6SEH8 477 aa21.62■■□□□ 1.05
RXRB-202ENST00000374685 CCDC102BQ68D86 513 aa21.62■■□□□ 1.05
RXRB-202ENST00000374685 DSCC1Q9BVC3 393 aa21.62■■□□□ 1.05
RXRB-202ENST00000374685 TERF1P54274 439 aa21.61■■□□□ 1.05
RXRB-202ENST00000374685 CEBPZQ03701 1054 aaKnown RBP21.61■■□□□ 1.05
RXRB-202ENST00000374685 SCRN1Q12765 414 aa21.61■■□□□ 1.05
RXRB-202ENST00000374685 DHX32Q7L7V1 743 aaKnown RBP21.61■■□□□ 1.05
RXRB-202ENST00000374685 STK11IPQ8N1F8 1099 aa21.61■■□□□ 1.05
RXRB-202ENST00000374685 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.61■■□□□ 1.05
RXRB-202ENST00000374685 GPAA1O43292 621 aa21.61■■□□□ 1.05
RXRB-202ENST00000374685 FAM184AQ8NB25 1140 aa21.61■■□□□ 1.05
RXRB-202ENST00000374685 GTF3C6Q969F1 213 aa21.61■■□□□ 1.05
RXRB-202ENST00000374685 CDCA7Q9BWT1 371 aaPredicted RBP21.61■■□□□ 1.05
RXRB-202ENST00000374685 PIH1D3Q9NQM4 214 aaKnown RBP21.61■■□□□ 1.05
RXRB-202ENST00000374685 H3BQV1 296 aa21.61■■□□□ 1.05
RXRB-202ENST00000374685 TOM1O60784 492 aa21.61■■□□□ 1.05
RXRB-202ENST00000374685 FGAP02671 866 aa21.61■■□□□ 1.05
RXRB-202ENST00000374685 GUCY1B3Q02153 619 aa21.61■■□□□ 1.05
RXRB-202ENST00000374685 IFFO2Q5TF58 517 aa21.61■■□□□ 1.05
RXRB-202ENST00000374685 LRSAM1Q6UWE0 723 aa21.61■■□□□ 1.05
RXRB-202ENST00000374685 MAP7D2Q96T17 732 aa21.61■■□□□ 1.05
RXRB-202ENST00000374685 RFX7Q2KHR2 1363 aa21.6■■□□□ 1.05
RXRB-202ENST00000374685 KDM4AO75164 1064 aa21.6■■□□□ 1.05
RXRB-202ENST00000374685 CAMTA2O94983 1202 aa21.59■■□□□ 1.05
RXRB-202ENST00000374685 LRP6O75581 1613 aa21.59■■□□□ 1.05
RXRB-202ENST00000374685 SYAP1Q96A49 352 aaPredicted RBP21.59■■□□□ 1.05
RXRB-202ENST00000374685 WWC3Q9ULE0 1092 aa21.59■■□□□ 1.05
RXRB-202ENST00000374685 DENND2AQ9ULE3 1009 aa21.59■■□□□ 1.05
RXRB-202ENST00000374685 THRAP3Q9Y2W1 955 aaKnown RBP21.59■■□□□ 1.05
RXRB-202ENST00000374685 A0A0U1RQG5 324 aaPredicted RBP21.58■■□□□ 1.05
RXRB-202ENST00000374685 GTF2E1P29083 439 aaPredicted RBP21.58■■□□□ 1.05
RXRB-202ENST00000374685 APPBP2Q92624 585 aa21.58■■□□□ 1.05
RXRB-202ENST00000374685 FBXO3Q9UK99 471 aa21.58■■□□□ 1.05
RXRB-202ENST00000374685 PHLPP1O60346 1717 aa21.58■■□□□ 1.05
RXRB-202ENST00000374685 WTIPA6NIX2 430 aaPredicted RBP21.58■■□□□ 1.04
RXRB-202ENST00000374685 LRRFIP1Q32MZ4 808 aaKnown RBP21.58■■□□□ 1.04
RXRB-202ENST00000374685 VGLL2Q8N8G2 317 aa21.58■■□□□ 1.04
RXRB-202ENST00000374685 AHDC1Q5TGY3 1603 aaPredicted RBP21.58■■□□□ 1.04
RXRB-202ENST00000374685 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.57■■□□□ 1.04
RXRB-202ENST00000374685 FOXP2O15409 715 aa21.57■■□□□ 1.04
RXRB-202ENST00000374685 PDCP20941 246 aa21.57■■□□□ 1.04
RXRB-202ENST00000374685 IMMTQ16891 758 aaKnown RBP21.57■■□□□ 1.04
RXRB-202ENST00000374685 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.57■■□□□ 1.044e-7■■■□□ 15.5
RXRB-202ENST00000374685 NUP98P52948 1817 aa21.57■■□□□ 1.04
RXRB-202ENST00000374685 EP400Q96L91 3159 aa21.57■■□□□ 1.04
RXRB-202ENST00000374685 UBE2HP62256 183 aa21.56■■□□□ 1.04
RXRB-202ENST00000374685 PUM3Q15397 648 aaKnown RBP21.56■■□□□ 1.04
RXRB-202ENST00000374685 ZNF532Q9HCE3 1301 aa21.56■■□□□ 1.04
RXRB-202ENST00000374685 BCAMP50895 628 aa21.56■■□□□ 1.04
RXRB-202ENST00000374685 GIMAP6Q6P9H5 292 aa21.56■■□□□ 1.04
RXRB-202ENST00000374685 MPNDQ8N594 471 aa21.56■■□□□ 1.04
RXRB-202ENST00000374685 PLCH1Q4KWH8 1693 aa21.56■■□□□ 1.04
RXRB-202ENST00000374685 TTC6Q86TZ1 520 aa21.56■■□□□ 1.04
RXRB-202ENST00000374685 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms