RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 DNAJC2Q99543 621 aaKnown RBP16.51■□□□□ 0.23
HMGCL-203ENST00000374490 FBXO3Q9UK99 471 aa16.51■□□□□ 0.23
HMGCL-203ENST00000374490 NHSQ6T4R5 1651 aa16.51■□□□□ 0.23
HMGCL-203ENST00000374490 NBPF26B4DH59 902 aa16.5■□□□□ 0.23
HMGCL-203ENST00000374490 STARD3NLO95772 234 aa16.5■□□□□ 0.23
HMGCL-203ENST00000374490 A1BGP04217 495 aa16.5■□□□□ 0.23
HMGCL-203ENST00000374490 PTMAP06454 111 aaKnown RBP16.5■□□□□ 0.23
HMGCL-203ENST00000374490 SLC27A3Q5K4L6 730 aa16.5■□□□□ 0.23
HMGCL-203ENST00000374490 NBPF10Q6P3W6 841 aaKnown RBP16.5■□□□□ 0.23
HMGCL-203ENST00000374490 NBPF15Q8N660 670 aa16.5■□□□□ 0.23
HMGCL-203ENST00000374490 SGIP1Q9BQI5 828 aa16.5■□□□□ 0.23
HMGCL-203ENST00000374490 DSCC1Q9BVC3 393 aa16.5■□□□□ 0.23
HMGCL-203ENST00000374490 SPEF2Q9C093 1822 aa16.5■□□□□ 0.23
HMGCL-203ENST00000374490 ZNF827Q17R98 1081 aa16.49■□□□□ 0.23
HMGCL-203ENST00000374490 GTF3C6Q969F1 213 aa16.49■□□□□ 0.23
HMGCL-203ENST00000374490 LLPHQ9BRT6 129 aaKnown RBP16.49■□□□□ 0.23
HMGCL-203ENST00000374490 TJP1Q07157 1748 aa16.49■□□□□ 0.23
HMGCL-203ENST00000374490 EYA2O00167 538 aa16.48■□□□□ 0.23
HMGCL-203ENST00000374490 ATG9AQ7Z3C6 839 aa16.48■□□□□ 0.23
HMGCL-203ENST00000374490 DNAJC10Q8IXB1 793 aa16.48■□□□□ 0.23
HMGCL-203ENST00000374490 JARID2Q92833 1246 aaPredicted RBP16.48■□□□□ 0.23
HMGCL-203ENST00000374490 EDC3Q96F86 508 aaKnown RBP16.48■□□□□ 0.23
HMGCL-203ENST00000374490 FUCA2Q9BTY2 467 aa16.48■□□□□ 0.23
HMGCL-203ENST00000374490 LRRC4BQ9NT99 713 aa16.48■□□□□ 0.23
HMGCL-203ENST00000374490 PAG1Q9NWQ8 432 aa16.48■□□□□ 0.23
HMGCL-203ENST00000374490 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.48■□□□□ 0.23
HMGCL-203ENST00000374490 CHMP3Q9Y3E7 222 aa16.48■□□□□ 0.23
HMGCL-203ENST00000374490 KIF3AQ9Y496 699 aa16.48■□□□□ 0.23
HMGCL-203ENST00000374490 CDC37L1Q7L3B6 337 aa16.48■□□□□ 0.23
HMGCL-203ENST00000374490 CCDC192P0DO97 292 aa16.47■□□□□ 0.23
HMGCL-203ENST00000374490 ZSCAN16Q9H4T2 348 aaPredicted RBP16.47■□□□□ 0.23
HMGCL-203ENST00000374490 ZMYM1Q5SVZ6 1142 aa16.46■□□□□ 0.23
HMGCL-203ENST00000374490 TTLL7Q6ZT98 887 aa16.46■□□□□ 0.23
HMGCL-203ENST00000374490 Q6ZUG5 572 aa16.46■□□□□ 0.23
HMGCL-203ENST00000374490 DDX46Q7L014 1031 aaKnown RBP16.46■□□□□ 0.23
HMGCL-203ENST00000374490 SLC16A10Q8TF71 515 aa16.46■□□□□ 0.23
HMGCL-203ENST00000374490 GOLGA6L4A6NEF3 574 aa16.45■□□□□ 0.22
HMGCL-203ENST00000374490 TPM3P06753 285 aa16.45■□□□□ 0.22
HMGCL-203ENST00000374490 CYP21A2P08686 494 aa16.45■□□□□ 0.22
HMGCL-203ENST00000374490 HCLS1P14317 486 aaPredicted RBP16.45■□□□□ 0.22
HMGCL-203ENST00000374490 HSP90B1P14625 803 aaKnown RBP16.45■□□□□ 0.22
HMGCL-203ENST00000374490 POLD1P28340 1107 aa16.45■□□□□ 0.22
HMGCL-203ENST00000374490 HMGN5P82970 282 aaKnown RBP16.45■□□□□ 0.22
HMGCL-203ENST00000374490 TRIM28Q13263 835 aaKnown RBP16.45■□□□□ 0.22
HMGCL-203ENST00000374490 DHX32Q7L7V1 743 aaKnown RBP16.45■□□□□ 0.22
HMGCL-203ENST00000374490 TTC6Q86TZ1 520 aa16.45■□□□□ 0.22
HMGCL-203ENST00000374490 AKT1S1Q96B36 256 aa16.45■□□□□ 0.22
HMGCL-203ENST00000374490 NEUROD6Q96NK8 337 aa16.45■□□□□ 0.22
HMGCL-203ENST00000374490 DDX19AQ9NUU7 478 aaKnown RBP16.45■□□□□ 0.22
HMGCL-203ENST00000374490 AKAP2Q9Y2D5 859 aa16.45■□□□□ 0.22
HMGCL-203ENST00000374490 ZNF330Q9Y3S2 320 aaPredicted RBP16.45■□□□□ 0.22
HMGCL-203ENST00000374490 ABCC12Q96J65 1359 aa16.45■□□□□ 0.22
HMGCL-203ENST00000374490 PFKFB2O60825 505 aa16.45■□□□□ 0.22
HMGCL-203ENST00000374490 KDM4AO75164 1064 aa16.45■□□□□ 0.22
HMGCL-203ENST00000374490 KIF6Q6ZMV9 814 aa16.45■□□□□ 0.22
HMGCL-203ENST00000374490 ZNF784Q8NCA9 323 aaPredicted RBP16.45■□□□□ 0.22
HMGCL-203ENST00000374490 SPATA32Q96LK8 384 aa16.45■□□□□ 0.22
HMGCL-203ENST00000374490 TCEANC2Q96MN5 208 aa16.45■□□□□ 0.22
HMGCL-203ENST00000374490 ISCA1Q9BUE6 129 aa16.45■□□□□ 0.22
HMGCL-203ENST00000374490 NUP62CLQ9H1M0 184 aa16.45■□□□□ 0.22
HMGCL-203ENST00000374490 TFCP2L1Q9NZI6 479 aa16.45■□□□□ 0.22
HMGCL-203ENST00000374490 TAF6LQ9Y6J9 622 aa16.45■□□□□ 0.22
HMGCL-203ENST00000374490 GOLIM4O00461 696 aa16.44■□□□□ 0.22
HMGCL-203ENST00000374490 RNF113AO15541 343 aaKnown RBP16.44■□□□□ 0.22
HMGCL-203ENST00000374490 ZFYP08048 801 aaPredicted RBP16.44■□□□□ 0.22
HMGCL-203ENST00000374490 IFIT1P09914 478 aaKnown RBP16.44■□□□□ 0.22
HMGCL-203ENST00000374490 FGD1P98174 961 aa16.44■□□□□ 0.22
HMGCL-203ENST00000374490 KIAA2012Q0VF49 1180 aa16.44■□□□□ 0.22
HMGCL-203ENST00000374490 MAP3K11Q16584 847 aa16.44■□□□□ 0.22
HMGCL-203ENST00000374490 NAA16Q6N069 864 aaPredicted RBP16.44■□□□□ 0.22
HMGCL-203ENST00000374490 CCDC129Q6ZRS4 1044 aa16.44■□□□□ 0.22
HMGCL-203ENST00000374490 CEP126Q9P2H0 1117 aa16.44■□□□□ 0.22
HMGCL-203ENST00000374490 TCIRG1Q13488 830 aa16.43■□□□□ 0.22
HMGCL-203ENST00000374490 ATL3Q6DD88 541 aa16.43■□□□□ 0.22
HMGCL-203ENST00000374490 GIMAP6Q6P9H5 292 aa16.43■□□□□ 0.22
HMGCL-203ENST00000374490 SMARCC2Q8TAQ2 1214 aa16.43■□□□□ 0.22
HMGCL-203ENST00000374490 SMARCC1Q92922 1105 aaPredicted RBP16.43■□□□□ 0.22
HMGCL-203ENST00000374490 PLA2G12BQ9BX93 195 aa16.43■□□□□ 0.22
HMGCL-203ENST00000374490 ZBTB3Q9H5J0 574 aa16.43■□□□□ 0.22
HMGCL-203ENST00000374490 USP25Q9UHP3 1055 aa16.43■□□□□ 0.22
HMGCL-203ENST00000374490 CFAP45Q9UL16 551 aa16.43■□□□□ 0.22
HMGCL-203ENST00000374490 TCHHQ07283 1943 aa16.43■□□□□ 0.22
HMGCL-203ENST00000374490 H3BQV1 296 aa16.42■□□□□ 0.22
HMGCL-203ENST00000374490 ADCY5O95622 1261 aa16.42■□□□□ 0.22
HMGCL-203ENST00000374490 RESTQ13127 1097 aa16.42■□□□□ 0.22
HMGCL-203ENST00000374490 STK3Q13188 491 aa16.42■□□□□ 0.22
HMGCL-203ENST00000374490 GPR162Q16538 588 aa16.42■□□□□ 0.22
HMGCL-203ENST00000374490 IFFO2Q5TF58 517 aa16.42■□□□□ 0.22
HMGCL-203ENST00000374490 LEO1Q8WVC0 666 aaPredicted RBP16.42■□□□□ 0.22
HMGCL-203ENST00000374490 AGXT2Q9BYV1 514 aa16.42■□□□□ 0.22
HMGCL-203ENST00000374490 CTNNA3Q9UI47 895 aa16.42■□□□□ 0.22
HMGCL-203ENST00000374490 CICQ96RK0 1608 aaPredicted RBP16.42■□□□□ 0.22
HMGCL-203ENST00000374490 A0A1B0GUL7 405 aa16.41■□□□□ 0.22
HMGCL-203ENST00000374490 PCCAP05165 728 aaPredicted RBP16.41■□□□□ 0.22
HMGCL-203ENST00000374490 CYP19A1P11511 503 aaPredicted RBP16.41■□□□□ 0.22
HMGCL-203ENST00000374490 CCDC57Q2TAC2 916 aa16.41■□□□□ 0.22
HMGCL-203ENST00000374490 CCDC158Q5M9N0 1113 aa16.41■□□□□ 0.22
HMGCL-203ENST00000374490 FERMT3Q86UX7 667 aa16.41■□□□□ 0.22
HMGCL-203ENST00000374490 BRF1Q92994 677 aa16.41■□□□□ 0.22
HMGCL-203ENST00000374490 SLC4A9Q96Q91 983 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms