RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 DLG5Q8TDM6 1919 aa16.41■□□□□ 0.22
HDAC8-204ENST00000373560 SLC4A8Q2Y0W8 1093 aa16.4■□□□□ 0.22
HDAC8-204ENST00000373560 RSBN1LQ6PCB5 846 aaPredicted RBP16.4■□□□□ 0.22
HDAC8-204ENST00000373560 TBC1D16Q8TBP0 767 aa16.4■□□□□ 0.22
HDAC8-204ENST00000373560 OTOFQ9HC10 1997 aa16.39■□□□□ 0.21
HDAC8-204ENST00000373560 ALDH1A1P00352 501 aa16.39■□□□□ 0.21
HDAC8-204ENST00000373560 LDLRAD1Q5T700 205 aa16.39■□□□□ 0.21
HDAC8-204ENST00000373560 CLMNQ96JQ2 1002 aa16.39■□□□□ 0.21
HDAC8-204ENST00000373560 SPTBN5Q9NRC6 3674 aaKnown RBP16.39■□□□□ 0.21
HDAC8-204ENST00000373560 VCANP13611 3396 aa16.38■□□□□ 0.21
HDAC8-204ENST00000373560 ANXA1P04083 346 aa16.38■□□□□ 0.21
HDAC8-204ENST00000373560 NUBP1P53384 320 aa16.38■□□□□ 0.21
HDAC8-204ENST00000373560 TCIRG1Q13488 830 aa16.38■□□□□ 0.21
HDAC8-204ENST00000373560 SLC9C1Q4G0N8 1177 aa16.38■□□□□ 0.21
HDAC8-204ENST00000373560 NLRP10Q86W26 655 aa16.38■□□□□ 0.21
HDAC8-204ENST00000373560 RASEFQ8IZ41 740 aa16.38■□□□□ 0.21
HDAC8-204ENST00000373560 SH3TC2Q8TF17 1288 aa16.38■□□□□ 0.21
HDAC8-204ENST00000373560 GJA5P36382 358 aa16.37■□□□□ 0.21
HDAC8-204ENST00000373560 PROSER3Q2NL68 480 aa16.37■□□□□ 0.21
HDAC8-204ENST00000373560 DPF3Q92784 378 aa16.37■□□□□ 0.21
HDAC8-204ENST00000373560 MXD3Q9BW11 206 aa16.37■□□□□ 0.21
HDAC8-204ENST00000373560 MANSC4A6NHS7 340 aaPredicted RBP16.36■□□□□ 0.21
HDAC8-204ENST00000373560 Q7L0L9 218 aa16.36■□□□□ 0.21
HDAC8-204ENST00000373560 AGBL3Q8NEM8 1001 aa16.36■□□□□ 0.21
HDAC8-204ENST00000373560 WNK4Q96J92 1243 aa16.36■□□□□ 0.21
HDAC8-204ENST00000373560 ANGEL1Q9UNK9 670 aaKnown RBP16.36■□□□□ 0.21
HDAC8-204ENST00000373560 ALPK3Q96L96 1907 aa16.35■□□□□ 0.21
HDAC8-204ENST00000373560 SASH1O94885 1247 aa16.35■□□□□ 0.21
HDAC8-204ENST00000373560 USP17L8P0C7I0 530 aa16.35■□□□□ 0.21
HDAC8-204ENST00000373560 HSPA5P11021 654 aaKnown RBP16.35■□□□□ 0.21
HDAC8-204ENST00000373560 EIF4A1P60842 406 aaKnown RBP16.35■□□□□ 0.21
HDAC8-204ENST00000373560 SP3Q02447 781 aa16.35■□□□□ 0.21
HDAC8-204ENST00000373560 EVX2Q03828 476 aa16.35■□□□□ 0.21
HDAC8-204ENST00000373560 PDIA6Q15084 440 aa16.35■□□□□ 0.21
HDAC8-204ENST00000373560 CC2D1BQ5T0F9 858 aaKnown RBP16.35■□□□□ 0.21
HDAC8-204ENST00000373560 TMC4Q7Z404 712 aa16.35■□□□□ 0.21
HDAC8-204ENST00000373560 EYA3Q99504 573 aa16.35■□□□□ 0.21
HDAC8-204ENST00000373560 PTPN18Q99952 460 aa16.35■□□□□ 0.21
HDAC8-204ENST00000373560 TAF7Q15545 349 aaPredicted RBP16.34■□□□□ 0.21
HDAC8-204ENST00000373560 DCAF8Q5TAQ9 597 aa16.34■□□□□ 0.21
HDAC8-204ENST00000373560 ARMC9Q7Z3E5 817 aa16.34■□□□□ 0.21
HDAC8-204ENST00000373560 RTF1Q92541 710 aaKnown RBP16.34■□□□□ 0.21
HDAC8-204ENST00000373560 FAM212AQ96EL1 285 aa16.34■□□□□ 0.21
HDAC8-204ENST00000373560 WNT10BO00744 389 aa16.33■□□□□ 0.2
HDAC8-204ENST00000373560 NF2P35240 595 aa16.33■□□□□ 0.2
HDAC8-204ENST00000373560 MTFR1Q15390 333 aa16.33■□□□□ 0.2
HDAC8-204ENST00000373560 ARHGAP39Q9C0H5 1083 aa16.33■□□□□ 0.2
HDAC8-204ENST00000373560 TRMT112Q9UI30 125 aaKnown RBP16.33■□□□□ 0.2
HDAC8-204ENST00000373560 SH3TC1Q8TE82 1336 aa16.33■□□□□ 0.2
HDAC8-204ENST00000373560 ZBTB7BO15156 539 aaPredicted RBP16.32■□□□□ 0.2
HDAC8-204ENST00000373560 UFL1O94874 794 aa16.32■□□□□ 0.2
HDAC8-204ENST00000373560 CNGB1Q14028 1251 aaPredicted RBP16.32■□□□□ 0.2
HDAC8-204ENST00000373560 UBE2Q1Q7Z7E8 422 aa16.32■□□□□ 0.2
HDAC8-204ENST00000373560 ZC3H12CQ9C0D7 883 aaKnown RBP16.32■□□□□ 0.2
HDAC8-204ENST00000373560 ZBTB48P10074 688 aaPredicted RBP16.3■□□□□ 0.2
HDAC8-204ENST00000373560 SLC10A4Q96EP9 437 aa16.3■□□□□ 0.2
HDAC8-204ENST00000373560 EYSQ5T1H1 3165 aa16.3■□□□□ 0.2
HDAC8-204ENST00000373560 ECM29Q5VYK3 1845 aa16.29■□□□□ 0.2
HDAC8-204ENST00000373560 SPEF2Q9C093 1822 aa16.29■□□□□ 0.2
HDAC8-204ENST00000373560 INHBEP58166 350 aa16.29■□□□□ 0.2
HDAC8-204ENST00000373560 NBPF11Q86T75 865 aa16.29■□□□□ 0.2
HDAC8-204ENST00000373560 DEFB123Q8N688 67 aa16.29■□□□□ 0.2
HDAC8-204ENST00000373560 G3V3G9 751 aa16.28■□□□□ 0.2
HDAC8-204ENST00000373560 PODXL2Q9NZ53 605 aa16.28■□□□□ 0.2
HDAC8-204ENST00000373560 STAP2Q9UGK3 403 aa16.28■□□□□ 0.2
HDAC8-204ENST00000373560 CIZ1Q9ULV3 898 aaPredicted RBP16.28■□□□□ 0.2
HDAC8-204ENST00000373560 STXBP5LQ9Y2K9 1186 aa16.28■□□□□ 0.2
HDAC8-204ENST00000373560 ERBB4Q15303 1308 aa16.27■□□□□ 0.2
HDAC8-204ENST00000373560 USP17L3A6NCW0 530 aa16.27■□□□□ 0.2
HDAC8-204ENST00000373560 USP17L4A6NCW7 530 aa16.27■□□□□ 0.2
HDAC8-204ENST00000373560 ECM2O94769 699 aaPredicted RBP16.27■□□□□ 0.2
HDAC8-204ENST00000373560 AIMP1Q12904 312 aaKnown RBP16.27■□□□□ 0.2
HDAC8-204ENST00000373560 SF3B3Q15393 1217 aaKnown RBP16.27■□□□□ 0.2
HDAC8-204ENST00000373560 MAP3K11Q16584 847 aa16.27■□□□□ 0.2
HDAC8-204ENST00000373560 RTL5Q5HYW3 569 aaPredicted RBP16.27■□□□□ 0.2
HDAC8-204ENST00000373560 USP17L1Q7RTZ2 530 aa16.27■□□□□ 0.2
HDAC8-204ENST00000373560 FAM89AQ96GI7 184 aa16.27■□□□□ 0.2
HDAC8-204ENST00000373560 SEC31BQ9NQW1 1179 aa16.27■□□□□ 0.2
HDAC8-204ENST00000373560 A0A1W2PPC1 479 aa16.26■□□□□ 0.19
HDAC8-204ENST00000373560 PER1O15534 1290 aaPredicted RBP16.26■□□□□ 0.19
HDAC8-204ENST00000373560 DACT2Q5SW24 774 aa16.26■□□□□ 0.19
HDAC8-204ENST00000373560 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.26■□□□□ 0.19
HDAC8-204ENST00000373560 NECTIN2Q92692 538 aa16.26■□□□□ 0.19
HDAC8-204ENST00000373560 GGA1Q9UJY5 639 aa16.26■□□□□ 0.19
HDAC8-204ENST00000373560 TESPA1A2RU30 521 aaPredicted RBP16.25■□□□□ 0.19
HDAC8-204ENST00000373560 EIF2S2P20042 333 aaKnown RBP16.25■□□□□ 0.19
HDAC8-204ENST00000373560 COPS6Q7L5N1 327 aa16.25■□□□□ 0.19
HDAC8-204ENST00000373560 XAGE3Q8WTP9 111 aa16.25■□□□□ 0.19
HDAC8-204ENST00000373560 MTMR10Q9NXD2 777 aa16.25■□□□□ 0.19
HDAC8-204ENST00000373560 PCDHAC2Q9Y5I4 1007 aa16.25■□□□□ 0.19
HDAC8-204ENST00000373560 RPS8P62241 208 aaKnown RBP16.24■□□□□ 0.19
HDAC8-204ENST00000373560 PRDM6Q9NQX0 595 aa16.24■□□□□ 0.19
HDAC8-204ENST00000373560 ANKIB1Q9P2G1 1089 aa16.24■□□□□ 0.19
HDAC8-204ENST00000373560 RAPGEFL1Q9UHV5 662 aa16.24■□□□□ 0.19
HDAC8-204ENST00000373560 COL1A1P02452 1464 aaPredicted RBP16.23■□□□□ 0.19
HDAC8-204ENST00000373560 AOX1Q06278 1338 aa16.23■□□□□ 0.19
HDAC8-204ENST00000373560 HTATSF1O43719 755 aaKnown RBP16.23■□□□□ 0.19
HDAC8-204ENST00000373560 CTGFP29279 349 aa16.23■□□□□ 0.19
HDAC8-204ENST00000373560 EIF4G2P78344 907 aaKnown RBP eCLIP16.23■□□□□ 0.19
HDAC8-204ENST00000373560 APOBEC3FQ8IUX4 373 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms