RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 LSG1Q9H089 658 aaKnown RBP9.58□□□□□ -0.88
GARNL3-201ENST00000373386 ANO2Q9NQ90 1003 aa9.58□□□□□ -0.88
GARNL3-201ENST00000373386 CHPF2Q9P2E5 772 aa9.58□□□□□ -0.88
GARNL3-201ENST00000373386 STK24Q9Y6E0 443 aa9.58□□□□□ -0.88
GARNL3-201ENST00000373386 SRGAP3O43295 1099 aa9.57□□□□□ -0.88
GARNL3-201ENST00000373386 KINO60870 393 aaKnown RBP9.57□□□□□ -0.88
GARNL3-201ENST00000373386 ECEL1O95672 775 aa9.57□□□□□ -0.88
GARNL3-201ENST00000373386 C5P01031 1676 aa9.57□□□□□ -0.88
GARNL3-201ENST00000373386 C1orf141Q5JVX7 400 aa9.57□□□□□ -0.88
GARNL3-201ENST00000373386 OGFOD1Q8N543 542 aa9.57□□□□□ -0.88
GARNL3-201ENST00000373386 ALDH8A1Q9H2A2 487 aaPredicted RBP9.57□□□□□ -0.88
GARNL3-201ENST00000373386 PNMA2Q9UL42 364 aa9.57□□□□□ -0.88
GARNL3-201ENST00000373386 JCADQ9P266 1359 aa9.57□□□□□ -0.88
GARNL3-201ENST00000373386 GCP02774 474 aa9.57□□□□□ -0.88
GARNL3-201ENST00000373386 KIAA2012Q0VF49 1180 aa9.57□□□□□ -0.88
GARNL3-201ENST00000373386 ZNF530Q6P9A1 599 aaPredicted RBP9.57□□□□□ -0.88
GARNL3-201ENST00000373386 CHAMP1Q96JM3 812 aa9.57□□□□□ -0.88
GARNL3-201ENST00000373386 SUN2Q9UH99 717 aa9.57□□□□□ -0.88
GARNL3-201ENST00000373386 PALD1Q9ULE6 856 aa9.57□□□□□ -0.88
GARNL3-201ENST00000373386 PI4KAP2A4QPH2 592 aa9.56□□□□□ -0.88
GARNL3-201ENST00000373386 WWC2Q6AWC2 1192 aa9.56□□□□□ -0.88
GARNL3-201ENST00000373386 CACTIN-AS1Q8N1I8 211 aa9.56□□□□□ -0.88
GARNL3-201ENST00000373386 PI4KAP1Q8N8J0 262 aa9.56□□□□□ -0.88
GARNL3-201ENST00000373386 RNF214Q8ND24 703 aa9.56□□□□□ -0.88
GARNL3-201ENST00000373386 LINS1Q8NG48 757 aa9.56□□□□□ -0.88
GARNL3-201ENST00000373386 RILPL2Q969X0 211 aa9.56□□□□□ -0.88
GARNL3-201ENST00000373386 LGR6Q9HBX8 967 aa9.56□□□□□ -0.88
GARNL3-201ENST00000373386 STRCQ7RTU9 1775 aa9.56□□□□□ -0.88
GARNL3-201ENST00000373386 DDX58O95786 925 aaKnown RBP9.56□□□□□ -0.88
GARNL3-201ENST00000373386 FAM163BP0C2L3 166 aa9.56□□□□□ -0.88
GARNL3-201ENST00000373386 NBPF7P0C2Y1 421 aaPredicted RBP9.56□□□□□ -0.88
GARNL3-201ENST00000373386 HNRNPH2P55795 449 aaKnown RBP9.56□□□□□ -0.88
GARNL3-201ENST00000373386 TRAF1Q13077 416 aa9.56□□□□□ -0.88
GARNL3-201ENST00000373386 SART3Q15020 963 aaKnown RBP9.56□□□□□ -0.88
GARNL3-201ENST00000373386 UNC5CLQ8IV45 518 aa9.56□□□□□ -0.88
GARNL3-201ENST00000373386 CWC25Q9NXE8 425 aaPredicted RBP9.56□□□□□ -0.88
GARNL3-201ENST00000373386 C1orf167Q5SNV9 1468 aa9.56□□□□□ -0.88
GARNL3-201ENST00000373386 PPFIA4O75335 1185 aa9.56□□□□□ -0.88
GARNL3-201ENST00000373386 BMS1Q14692 1282 aaKnown RBP9.56□□□□□ -0.88
GARNL3-201ENST00000373386 CLASRPQ8N2M8 674 aaKnown RBP9.56□□□□□ -0.88
GARNL3-201ENST00000373386 ZSCAN31Q96LW9 406 aaPredicted RBP9.56□□□□□ -0.88
GARNL3-201ENST00000373386 DDX21Q9NR30 783 aaKnown RBP eCLIP9.56□□□□□ -0.88
GARNL3-201ENST00000373386 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.56□□□□□ -0.88
GARNL3-201ENST00000373386 RPAP1Q9BWH6 1393 aaPredicted RBP9.55□□□□□ -0.88
GARNL3-201ENST00000373386 RIOK3O14730 519 aaKnown RBP9.55□□□□□ -0.88
GARNL3-201ENST00000373386 ADCY2Q08462 1091 aa9.55□□□□□ -0.88
GARNL3-201ENST00000373386 NOM1Q5C9Z4 860 aaKnown RBP9.55□□□□□ -0.88
GARNL3-201ENST00000373386 ECHDC1Q9NTX5 307 aa9.55□□□□□ -0.88
GARNL3-201ENST00000373386 RGPD5Q99666 1765 aa9.55□□□□□ -0.88
GARNL3-201ENST00000373386 TMEM94Q12767 1356 aa9.55□□□□□ -0.88
GARNL3-201ENST00000373386 FAM200BP0CF97 657 aa9.55□□□□□ -0.88
GARNL3-201ENST00000373386 GYS2P54840 703 aa9.55□□□□□ -0.88
GARNL3-201ENST00000373386 ESCO1Q5FWF5 840 aa9.55□□□□□ -0.88
GARNL3-201ENST00000373386 ZFYVE27Q5T4F4 411 aa9.55□□□□□ -0.88
GARNL3-201ENST00000373386 VPS53Q5VIR6 699 aa9.55□□□□□ -0.88
GARNL3-201ENST00000373386 TSHZ3Q63HK5 1081 aa9.55□□□□□ -0.88
GARNL3-201ENST00000373386 LZTS2Q9BRK4 669 aa9.55□□□□□ -0.88
GARNL3-201ENST00000373386 SH2B1Q9NRF2 756 aaPredicted RBP9.55□□□□□ -0.88
GARNL3-201ENST00000373386 ATP6V1DQ9Y5K8 247 aa9.55□□□□□ -0.88
GARNL3-201ENST00000373386 SNX14Q9Y5W7 946 aa9.55□□□□□ -0.88
GARNL3-201ENST00000373386 IPO5O00410 1097 aaKnown RBP9.54□□□□□ -0.88
GARNL3-201ENST00000373386 TTC31Q49AM3 519 aaPredicted RBP9.54□□□□□ -0.88
GARNL3-201ENST00000373386 CCDC183Q5T5S1 534 aa9.54□□□□□ -0.88
GARNL3-201ENST00000373386 LIMCH1Q9UPQ0 1083 aa9.54□□□□□ -0.88
GARNL3-201ENST00000373386 HSP90B2PQ58FF3 399 aa9.54□□□□□ -0.88
GARNL3-201ENST00000373386 MUM1L1Q5H9M0 696 aa9.54□□□□□ -0.88
GARNL3-201ENST00000373386 USHBP1Q8N6Y0 703 aa9.54□□□□□ -0.88
GARNL3-201ENST00000373386 ANKRD24Q8TF21 1146 aa9.54□□□□□ -0.88
GARNL3-201ENST00000373386 LTV1Q96GA3 475 aaPredicted RBP9.54□□□□□ -0.88
GARNL3-201ENST00000373386 CPSF2Q9P2I0 782 aaKnown RBP9.54□□□□□ -0.88
GARNL3-201ENST00000373386 ABCF2Q9UG63 623 aa9.54□□□□□ -0.88
GARNL3-201ENST00000373386 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.54□□□□□ -0.88
GARNL3-201ENST00000373386 GLI3P10071 1580 aa9.54□□□□□ -0.88
GARNL3-201ENST00000373386 EXOC5O00471 708 aa9.53□□□□□ -0.88
GARNL3-201ENST00000373386 MCTP2Q6DN12 878 aa9.53□□□□□ -0.88
GARNL3-201ENST00000373386 USP48Q86UV5 1035 aa9.53□□□□□ -0.88
GARNL3-201ENST00000373386 SUGP1Q8IWZ8 645 aaKnown RBP9.53□□□□□ -0.88
GARNL3-201ENST00000373386 NOLC1Q14978 699 aaKnown RBP eCLIP9.53□□□□□ -0.88
GARNL3-201ENST00000373386 TSGA10IPQ3SY00 556 aa9.53□□□□□ -0.88
GARNL3-201ENST00000373386 ANKRD7Q92527 254 aa9.53□□□□□ -0.88
GARNL3-201ENST00000373386 TATDN2Q93075 761 aa9.53□□□□□ -0.88
GARNL3-201ENST00000373386 BCL2L12Q9HB09 334 aa9.53□□□□□ -0.88
GARNL3-201ENST00000373386 ZSWIM6Q9HCJ5 1215 aa9.53□□□□□ -0.88
GARNL3-201ENST00000373386 MAP3K2Q9Y2U5 619 aa9.53□□□□□ -0.88
GARNL3-201ENST00000373386 STRCP1A6NGW2 1772 aa9.53□□□□□ -0.88
GARNL3-201ENST00000373386 ARFGEF2Q9Y6D5 1785 aa9.53□□□□□ -0.88
GARNL3-201ENST00000373386 PAPPAQ13219 1627 aa9.53□□□□□ -0.88
GARNL3-201ENST00000373386 TMCO5BA8MYB1 307 aa9.53□□□□□ -0.88
GARNL3-201ENST00000373386 GRM8O00222 908 aa9.53□□□□□ -0.88
GARNL3-201ENST00000373386 PEX14O75381 377 aa9.53□□□□□ -0.88
GARNL3-201ENST00000373386 TTC19Q6DKK2 380 aaPredicted RBP9.53□□□□□ -0.88
GARNL3-201ENST00000373386 NUTM1Q86Y26 1132 aa9.53□□□□□ -0.88
GARNL3-201ENST00000373386 RBM33Q96EV2 1170 aaKnown RBP9.53□□□□□ -0.88
GARNL3-201ENST00000373386 UPF3BQ9BZI7 483 aaKnown RBP9.53□□□□□ -0.88
GARNL3-201ENST00000373386 VEZTQ9HBM0 779 aa9.53□□□□□ -0.88
GARNL3-201ENST00000373386 ARHGEF10LQ9HCE6 1279 aa9.53□□□□□ -0.88
GARNL3-201ENST00000373386 IL1RAPL2Q9NP60 686 aa9.53□□□□□ -0.88
GARNL3-201ENST00000373386 UBR2Q8IWV8 1755 aa9.52□□□□□ -0.88
GARNL3-201ENST00000373386 TCHHQ07283 1943 aa9.52□□□□□ -0.88
GARNL3-201ENST00000373386 MYO1CO00159 1063 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms