RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 SNAP23O00161 211 aa19.4■□□□□ 0.7
TMEM53-204ENST00000372243 C21orf2O43822 256 aa19.4■□□□□ 0.7
TMEM53-204ENST00000372243 RGS3P49796 1198 aa19.4■□□□□ 0.7
TMEM53-204ENST00000372243 CCDC93Q567U6 631 aa19.4■□□□□ 0.7
TMEM53-204ENST00000372243 OLFM4Q6UX06 510 aa19.4■□□□□ 0.7
TMEM53-204ENST00000372243 DPP8Q6V1X1 898 aaPredicted RBP19.4■□□□□ 0.7
TMEM53-204ENST00000372243 SKAP1Q86WV1 359 aa19.4■□□□□ 0.7
TMEM53-204ENST00000372243 RTKN2Q8IZC4 609 aa19.4■□□□□ 0.7
TMEM53-204ENST00000372243 RTFDC1Q9BY42 306 aaPredicted RBP19.4■□□□□ 0.7
TMEM53-204ENST00000372243 ECHDC1Q9NTX5 307 aa19.4■□□□□ 0.7
TMEM53-204ENST00000372243 IRS2Q9Y4H2 1338 aa19.4■□□□□ 0.7
TMEM53-204ENST00000372243 ARFGEF1Q9Y6D6 1849 aa19.4■□□□□ 0.7
TMEM53-204ENST00000372243 UFL1O94874 794 aa19.4■□□□□ 0.7
TMEM53-204ENST00000372243 CCDC158Q5M9N0 1113 aa19.4■□□□□ 0.7
TMEM53-204ENST00000372243 POLLQ9UGP5 575 aa19.4■□□□□ 0.7
TMEM53-204ENST00000372243 MED23Q9ULK4 1368 aa19.39■□□□□ 0.69
TMEM53-204ENST00000372243 ADORA1P30542 326 aa19.39■□□□□ 0.69
TMEM53-204ENST00000372243 GORABQ5T7V8 394 aa19.39■□□□□ 0.69
TMEM53-204ENST00000372243 ZNF512BQ96KM6 892 aaPredicted RBP19.39■□□□□ 0.69
TMEM53-204ENST00000372243 WTIPA6NIX2 430 aaPredicted RBP19.38■□□□□ 0.69
TMEM53-204ENST00000372243 ERC2O15083 957 aa19.38■□□□□ 0.69
TMEM53-204ENST00000372243 ZBTB22O15209 634 aa19.38■□□□□ 0.69
TMEM53-204ENST00000372243 CAVIN4Q5BKX8 364 aa19.38■□□□□ 0.69
TMEM53-204ENST00000372243 ZNF219Q9P2Y4 722 aaPredicted RBP19.38■□□□□ 0.69
TMEM53-204ENST00000372243 GLRX3O76003 335 aaKnown RBP19.37■□□□□ 0.69
TMEM53-204ENST00000372243 ATP5JP18859 108 aa19.37■□□□□ 0.69
TMEM53-204ENST00000372243 CCDC102BQ68D86 513 aa19.37■□□□□ 0.69
TMEM53-204ENST00000372243 SUPT20HQ8NEM7 779 aa19.37■□□□□ 0.69
TMEM53-204ENST00000372243 PI4K2BQ8TCG2 481 aa19.37■□□□□ 0.69
TMEM53-204ENST00000372243 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.37■□□□□ 0.69
TMEM53-204ENST00000372243 PSMD1Q99460 953 aa19.37■□□□□ 0.69
TMEM53-204ENST00000372243 BCS1LQ9Y276 419 aa19.37■□□□□ 0.69
TMEM53-204ENST00000372243 C6orf229H3BNL8 230 aa19.36■□□□□ 0.69
TMEM53-204ENST00000372243 FBXO33Q7Z6M2 555 aa19.36■□□□□ 0.69
TMEM53-204ENST00000372243 FAM84BQ96KN1 310 aaPredicted RBP19.36■□□□□ 0.69
TMEM53-204ENST00000372243 EYA3Q99504 573 aa19.36■□□□□ 0.69
TMEM53-204ENST00000372243 UQCRFS1P1P0C7P4 283 aa19.36■□□□□ 0.69
TMEM53-204ENST00000372243 ARID4AP29374 1257 aaPredicted RBP19.36■□□□□ 0.69
TMEM53-204ENST00000372243 FER1L6Q2WGJ9 1857 aa19.35■□□□□ 0.69
TMEM53-204ENST00000372243 KLRK1P26718 216 aa19.35■□□□□ 0.69
TMEM53-204ENST00000372243 HIBADHP31937 336 aaKnown RBP19.35■□□□□ 0.69
TMEM53-204ENST00000372243 TTC39AQ5SRH9 613 aa19.35■□□□□ 0.69
TMEM53-204ENST00000372243 TTC22Q5TAA0 569 aa19.35■□□□□ 0.69
TMEM53-204ENST00000372243 VPS33BQ9H267 617 aa19.35■□□□□ 0.69
TMEM53-204ENST00000372243 PHKA1P46020 1223 aa19.34■□□□□ 0.69
TMEM53-204ENST00000372243 GYG1P46976 350 aa19.34■□□□□ 0.69
TMEM53-204ENST00000372243 BCAMP50895 628 aa19.34■□□□□ 0.69
TMEM53-204ENST00000372243 FKBP4Q02790 459 aaKnown RBP eCLIP19.34■□□□□ 0.69
TMEM53-204ENST00000372243 TSHZ3Q63HK5 1081 aa19.34■□□□□ 0.69
TMEM53-204ENST00000372243 ZNF804AQ7Z570 1209 aa19.34■□□□□ 0.69
TMEM53-204ENST00000372243 TXNRD3Q86VQ6 643 aa19.34■□□□□ 0.69
TMEM53-204ENST00000372243 ZC3H12CQ9C0D7 883 aaKnown RBP19.34■□□□□ 0.69
TMEM53-204ENST00000372243 GNL3LQ9NVN8 582 aaKnown RBP19.34■□□□□ 0.69
TMEM53-204ENST00000372243 SEMA3EO15041 775 aa19.33■□□□□ 0.69
TMEM53-204ENST00000372243 WASHC4Q2M389 1173 aa19.33■□□□□ 0.69
TMEM53-204ENST00000372243 VPS37DQ86XT2 251 aa19.33■□□□□ 0.69
TMEM53-204ENST00000372243 LTBP3Q9NS15 1303 aa19.33■□□□□ 0.68
TMEM53-204ENST00000372243 BMP2KLQ5H9B9 411 aa19.32■□□□□ 0.68
TMEM53-204ENST00000372243 WWC3Q9ULE0 1092 aa19.32■□□□□ 0.68
TMEM53-204ENST00000372243 GPR101Q96P66 508 aaPredicted RBP19.32■□□□□ 0.68
TMEM53-204ENST00000372243 HAUS7Q99871 368 aa19.32■□□□□ 0.68
TMEM53-204ENST00000372243 AKAP11Q9UKA4 1901 aa19.31■□□□□ 0.68
TMEM53-204ENST00000372243 PDS5AQ29RF7 1337 aaKnown RBP19.31■□□□□ 0.68
TMEM53-204ENST00000372243 GSPT1P15170 499 aaKnown RBP19.31■□□□□ 0.68
TMEM53-204ENST00000372243 KIAA2012Q0VF49 1180 aa19.31■□□□□ 0.68
TMEM53-204ENST00000372243 COA1Q9GZY4 146 aa19.31■□□□□ 0.68
TMEM53-204ENST00000372243 TAOK3Q9H2K8 898 aa19.31■□□□□ 0.68
TMEM53-204ENST00000372243 BOLA2Q9H3K6 86 aa19.31■□□□□ 0.68
TMEM53-204ENST00000372243 IL1R1P14778 569 aa19.3■□□□□ 0.68
TMEM53-204ENST00000372243 MCAMP43121 646 aa19.3■□□□□ 0.68
TMEM53-204ENST00000372243 TDRD7Q8NHU6 1098 aaKnown RBP19.3■□□□□ 0.68
TMEM53-204ENST00000372243 CD209Q9NNX6 404 aa19.3■□□□□ 0.68
TMEM53-204ENST00000372243 RIMBP2O15034 1052 aa19.29■□□□□ 0.68
TMEM53-204ENST00000372243 RASGRF1Q13972 1273 aa19.29■□□□□ 0.68
TMEM53-204ENST00000372243 SCARF1Q14162 830 aa19.29■□□□□ 0.68
TMEM53-204ENST00000372243 HMG20BQ9P0W2 317 aa19.29■□□□□ 0.68
TMEM53-204ENST00000372243 DENND2AQ9ULE3 1009 aa19.29■□□□□ 0.68
TMEM53-204ENST00000372243 GOLGB1Q14789 3259 aaKnown RBP19.29■□□□□ 0.68
TMEM53-204ENST00000372243 MYH13Q9UKX3 1938 aa19.29■□□□□ 0.68
TMEM53-204ENST00000372243 NFKBIEO00221 500 aa19.28■□□□□ 0.68
TMEM53-204ENST00000372243 PODNQ7Z5L7 613 aa19.28■□□□□ 0.68
TMEM53-204ENST00000372243 SPATA5Q8NB90 893 aa19.28■□□□□ 0.68
TMEM53-204ENST00000372243 SRCAPQ6ZRS2 3230 aa19.28■□□□□ 0.68
TMEM53-204ENST00000372243 EVI5LQ96CN4 794 aa19.27■□□□□ 0.68
TMEM53-204ENST00000372243 PPIP5K2O43314 1243 aa19.27■□□□□ 0.67
TMEM53-204ENST00000372243 IARSP41252 1262 aaKnown RBP19.27■□□□□ 0.67
TMEM53-204ENST00000372243 AOC3Q16853 763 aa19.27■□□□□ 0.67
TMEM53-204ENST00000372243 TICAM2Q86XR7 235 aa19.27■□□□□ 0.67
TMEM53-204ENST00000372243 CNTROBQ8N137 903 aa19.27■□□□□ 0.67
TMEM53-204ENST00000372243 G3V3G9 751 aa19.26■□□□□ 0.67
TMEM53-204ENST00000372243 FRAT2O75474 233 aaPredicted RBP19.26■□□□□ 0.67
TMEM53-204ENST00000372243 SDSP20132 328 aa19.26■□□□□ 0.67
TMEM53-204ENST00000372243 ZAP70P43403 619 aa19.26■□□□□ 0.67
TMEM53-204ENST00000372243 TTF1Q15361 905 aaPredicted RBP19.26■□□□□ 0.67
TMEM53-204ENST00000372243 DCAF8Q5TAQ9 597 aa19.26■□□□□ 0.67
TMEM53-204ENST00000372243 DNAJC2Q99543 621 aaKnown RBP19.26■□□□□ 0.67
TMEM53-204ENST00000372243 PAG1Q9NWQ8 432 aa19.26■□□□□ 0.67
TMEM53-204ENST00000372243 TRIM6-TRIM34B2RNG4 842 aa19.25■□□□□ 0.67
TMEM53-204ENST00000372243 PI16Q6UXB8 463 aa19.25■□□□□ 0.67
TMEM53-204ENST00000372243 SNRKQ9NRH2 765 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms