RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 PPP1R12AO14974 1030 aaPredicted RBP10.41□□□□□ -0.74
ATG4A-203ENST00000372232 CCDC112Q8NEF3 446 aa10.41□□□□□ -0.74
ATG4A-203ENST00000372232 LTV1Q96GA3 475 aaPredicted RBP10.41□□□□□ -0.74
ATG4A-203ENST00000372232 DCTPP1Q9H773 170 aa10.41□□□□□ -0.74
ATG4A-203ENST00000372232 BSDC1Q9NW68 430 aaPredicted RBP10.41□□□□□ -0.74
ATG4A-203ENST00000372232 PPP1R1BQ9UD71 204 aaPredicted RBP10.41□□□□□ -0.74
ATG4A-203ENST00000372232 ADGRL3Q9HAR2 1447 aa10.41□□□□□ -0.74
ATG4A-203ENST00000372232 SART3Q15020 963 aaKnown RBP10.4□□□□□ -0.74
ATG4A-203ENST00000372232 ESCO1Q5FWF5 840 aa10.4□□□□□ -0.74
ATG4A-203ENST00000372232 FBXO38Q6PIJ6 1188 aa10.4□□□□□ -0.74
ATG4A-203ENST00000372232 CCDC191Q8NCU4 936 aa10.4□□□□□ -0.74
ATG4A-203ENST00000372232 NEK11Q8NG66 645 aa10.4□□□□□ -0.74
ATG4A-203ENST00000372232 SYAP1Q96A49 352 aaPredicted RBP10.4□□□□□ -0.74
ATG4A-203ENST00000372232 CWC22Q9HCG8 908 aaKnown RBP10.4□□□□□ -0.74
ATG4A-203ENST00000372232 TTC36A6NLP5 189 aa10.4□□□□□ -0.74
ATG4A-203ENST00000372232 TAGLNQ01995 201 aaKnown RBP10.4□□□□□ -0.74
ATG4A-203ENST00000372232 PSME1Q06323 249 aa10.4□□□□□ -0.74
ATG4A-203ENST00000372232 PACS2Q86VP3 889 aa10.4□□□□□ -0.74
ATG4A-203ENST00000372232 RPAP2Q8IXW5 612 aaPredicted RBP10.4□□□□□ -0.74
ATG4A-203ENST00000372232 ANKRD44Q8N8A2 993 aa10.4□□□□□ -0.74
ATG4A-203ENST00000372232 IL17REQ8NFR9 667 aa10.4□□□□□ -0.74
ATG4A-203ENST00000372232 IP6K1Q92551 441 aa10.4□□□□□ -0.74
ATG4A-203ENST00000372232 RRP15Q9Y3B9 282 aaKnown RBP10.4□□□□□ -0.74
ATG4A-203ENST00000372232 MSH6P52701 1360 aa10.39□□□□□ -0.75
ATG4A-203ENST00000372232 ATP10DQ9P241 1426 aa10.39□□□□□ -0.75
ATG4A-203ENST00000372232 ATP6V1AP38606 617 aa10.39□□□□□ -0.75
ATG4A-203ENST00000372232 MAGEA9P43362 315 aa10.39□□□□□ -0.75
ATG4A-203ENST00000372232 TRDNQ13061 729 aa10.39□□□□□ -0.75
ATG4A-203ENST00000372232 ZSCAN26Q16670 478 aa10.39□□□□□ -0.75
ATG4A-203ENST00000372232 G2E3Q7L622 706 aa10.39□□□□□ -0.75
ATG4A-203ENST00000372232 MAP3K5Q99683 1374 aa10.39□□□□□ -0.75
ATG4A-203ENST00000372232 MCTP2Q6DN12 878 aa10.39□□□□□ -0.75
ATG4A-203ENST00000372232 CEP85Q6P2H3 762 aa10.39□□□□□ -0.75
ATG4A-203ENST00000372232 RPAINQ86UA6 219 aa10.39□□□□□ -0.75
ATG4A-203ENST00000372232 IQUBQ8NA54 791 aa10.39□□□□□ -0.75
ATG4A-203ENST00000372232 PTCD2Q8WV60 388 aaKnown RBP10.39□□□□□ -0.75
ATG4A-203ENST00000372232 MEIS3Q99687 375 aa10.39□□□□□ -0.75
ATG4A-203ENST00000372232 C11orf91Q3C1V1 193 aa10.38□□□□□ -0.75
ATG4A-203ENST00000372232 RNF20Q5VTR2 975 aa10.38□□□□□ -0.75
ATG4A-203ENST00000372232 LRCH2Q5VUJ6 765 aa10.38□□□□□ -0.75
ATG4A-203ENST00000372232 USHBP1Q8N6Y0 703 aa10.38□□□□□ -0.75
ATG4A-203ENST00000372232 FBXO18Q8NFZ0 1043 aa10.38□□□□□ -0.75
ATG4A-203ENST00000372232 L3MBTL3Q96JM7 780 aaPredicted RBP10.38□□□□□ -0.75
ATG4A-203ENST00000372232 BABAM1Q9NWV8 329 aa10.38□□□□□ -0.75
ATG4A-203ENST00000372232 LRRFIP2Q9Y608 721 aaKnown RBP10.38□□□□□ -0.75
ATG4A-203ENST00000372232 KDM4AO75164 1064 aa10.38□□□□□ -0.75
ATG4A-203ENST00000372232 RABEP1Q15276 862 aa10.38□□□□□ -0.75
ATG4A-203ENST00000372232 TAF7Q15545 349 aaPredicted RBP10.38□□□□□ -0.75
ATG4A-203ENST00000372232 ZKSCAN8Q15776 578 aaPredicted RBP10.38□□□□□ -0.75
ATG4A-203ENST00000372232 KCNH5Q8NCM2 988 aa10.38□□□□□ -0.75
ATG4A-203ENST00000372232 GOLGA5Q8TBA6 731 aa10.38□□□□□ -0.75
ATG4A-203ENST00000372232 ZNF592Q92610 1267 aa10.38□□□□□ -0.75
ATG4A-203ENST00000372232 CEP89Q96ST8 783 aa10.38□□□□□ -0.75
ATG4A-203ENST00000372232 STK31Q9BXU1 1019 aa10.38□□□□□ -0.75
ATG4A-203ENST00000372232 NFAT5O94916 1531 aa10.37□□□□□ -0.75
ATG4A-203ENST00000372232 CALRP27797 417 aaKnown RBP10.37□□□□□ -0.75
ATG4A-203ENST00000372232 SSR1P43307 286 aaKnown RBP10.37□□□□□ -0.75
ATG4A-203ENST00000372232 CCT4P50991 539 aaKnown RBP10.37□□□□□ -0.75
ATG4A-203ENST00000372232 TPM4P67936 248 aa10.37□□□□□ -0.75
ATG4A-203ENST00000372232 PKP1Q13835 747 aa10.37□□□□□ -0.75
ATG4A-203ENST00000372232 CCDC30Q5VVM6 783 aa10.37□□□□□ -0.75
ATG4A-203ENST00000372232 NBPF6Q5VWK0 638 aa10.37□□□□□ -0.75
ATG4A-203ENST00000372232 PLEKHM2Q8IWE5 1019 aa10.37□□□□□ -0.75
ATG4A-203ENST00000372232 NBPF4Q96M43 638 aa10.37□□□□□ -0.75
ATG4A-203ENST00000372232 FHOD1Q9Y613 1164 aa10.37□□□□□ -0.75
ATG4A-203ENST00000372232 LRRC37A3O60309 1634 aa10.37□□□□□ -0.75
ATG4A-203ENST00000372232 SOS1Q07889 1333 aaPredicted RBP10.37□□□□□ -0.75
ATG4A-203ENST00000372232 CCDC196A0A1B0GTZ2 297 aa10.36□□□□□ -0.75
ATG4A-203ENST00000372232 F6X3S4 739 aa10.36□□□□□ -0.75
ATG4A-203ENST00000372232 PIK3CDO00329 1044 aa10.36□□□□□ -0.75
ATG4A-203ENST00000372232 TNNT1P13805 278 aa10.36□□□□□ -0.75
ATG4A-203ENST00000372232 SETQ01105 290 aaPredicted RBP10.36□□□□□ -0.75
ATG4A-203ENST00000372232 GPS2Q13227 327 aa10.36□□□□□ -0.75
ATG4A-203ENST00000372232 SLC4A10Q6U841 1118 aa10.36□□□□□ -0.75
ATG4A-203ENST00000372232 SREK1Q8WXA9 508 aaKnown RBP10.36□□□□□ -0.75
ATG4A-203ENST00000372232 HLA-CQ95604 372 aa10.36□□□□□ -0.75
ATG4A-203ENST00000372232 ERO1AQ96HE7 468 aa10.36□□□□□ -0.75
ATG4A-203ENST00000372232 ZDHHC9Q9Y397 364 aa10.36□□□□□ -0.75
ATG4A-203ENST00000372232 RCCD1A6NED2 376 aa10.36□□□□□ -0.75
ATG4A-203ENST00000372232 H2AFXP16104 143 aaPredicted RBP10.36□□□□□ -0.75
ATG4A-203ENST00000372232 PLA2G4AP47712 749 aa10.36□□□□□ -0.75
ATG4A-203ENST00000372232 GUCA2AQ02747 115 aa10.36□□□□□ -0.75
ATG4A-203ENST00000372232 JMYQ8N9B5 988 aa10.36□□□□□ -0.75
ATG4A-203ENST00000372232 TTC13Q8NBP0 860 aa10.36□□□□□ -0.75
ATG4A-203ENST00000372232 ORAI2Q96SN7 254 aa10.36□□□□□ -0.75
ATG4A-203ENST00000372232 KLHL33A6NCF5 533 aa10.35□□□□□ -0.75
ATG4A-203ENST00000372232 G3V3G9 751 aa10.35□□□□□ -0.75
ATG4A-203ENST00000372232 MAP2K2P36507 400 aa10.35□□□□□ -0.75
ATG4A-203ENST00000372232 TYW1BQ6NUM6 668 aa10.35□□□□□ -0.75
ATG4A-203ENST00000372232 NBPF5PQ86XG9 351 aaPredicted RBP10.35□□□□□ -0.75
ATG4A-203ENST00000372232 V9GYY5 206 aaPredicted RBP10.35□□□□□ -0.75
ATG4A-203ENST00000372232 ZNF335Q9H4Z2 1342 aaPredicted RBP10.35□□□□□ -0.75
ATG4A-203ENST00000372232 GSPT1P15170 499 aaKnown RBP10.35□□□□□ -0.75
ATG4A-203ENST00000372232 ANKRD20A12PQ8NF67 263 aa10.35□□□□□ -0.75
ATG4A-203ENST00000372232 CEMIPQ8WUJ3 1361 aa10.35□□□□□ -0.75
ATG4A-203ENST00000372232 GTF3C6Q969F1 213 aa10.35□□□□□ -0.75
ATG4A-203ENST00000372232 NOVA2Q9UNW9 492 aaKnown RBP10.35□□□□□ -0.75
ATG4A-203ENST00000372232 SOWAHDA6NJG2 315 aa10.34□□□□□ -0.75
ATG4A-203ENST00000372232 ATP9BO43861 1147 aa10.34□□□□□ -0.75
ATG4A-203ENST00000372232 CPP00450 1065 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms