RNA–Protein interactions for RNA: ENST00000370886.9

EXOSC1-203, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 741 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-203ENST00000370886 AOC3Q16853 763 aa13.38□□□□□ -0.27
EXOSC1-203ENST00000370886 CCDC57Q2TAC2 916 aa13.38□□□□□ -0.27
EXOSC1-203ENST00000370886 CDC37L1Q7L3B6 337 aa13.38□□□□□ -0.27
EXOSC1-203ENST00000370886 ANKRD18AQ8IVF6 992 aa13.38□□□□□ -0.27
EXOSC1-203ENST00000370886 KAZALD1Q96I82 304 aa13.38□□□□□ -0.27
EXOSC1-203ENST00000370886 CDC5LQ99459 802 aaKnown RBP13.38□□□□□ -0.27
EXOSC1-203ENST00000370886 ZNRF3Q9ULT6 936 aa13.38□□□□□ -0.27
EXOSC1-203ENST00000370886 GNAI2P04899 355 aa13.37□□□□□ -0.27
EXOSC1-203ENST00000370886 CSF1RP07333 972 aa13.37□□□□□ -0.27
EXOSC1-203ENST00000370886 PRPF38BQ5VTL8 546 aaKnown RBP13.37□□□□□ -0.27
EXOSC1-203ENST00000370886 ANKRD44Q8N8A2 993 aa13.37□□□□□ -0.27
EXOSC1-203ENST00000370886 ZNF594Q96JF6 807 aaPredicted RBP13.37□□□□□ -0.27
EXOSC1-203ENST00000370886 SAGE1Q9NXZ1 904 aa13.37□□□□□ -0.27
EXOSC1-203ENST00000370886 PGAP2Q9UHJ9 254 aa13.37□□□□□ -0.27
EXOSC1-203ENST00000370886 AKAP11Q9UKA4 1901 aa13.37□□□□□ -0.27
EXOSC1-203ENST00000370886 ANKRD36CQ5JPF3 1778 aa13.36□□□□□ -0.27
EXOSC1-203ENST00000370886 ZBTB7BO15156 539 aaPredicted RBP13.36□□□□□ -0.27
EXOSC1-203ENST00000370886 IGHMBP2P38935 993 aaKnown RBP13.36□□□□□ -0.27
EXOSC1-203ENST00000370886 GMPSP49915 693 aaPredicted RBP13.36□□□□□ -0.27
EXOSC1-203ENST00000370886 HUNKP57058 714 aa13.36□□□□□ -0.27
EXOSC1-203ENST00000370886 IRX6P78412 446 aaPredicted RBP13.36□□□□□ -0.27
EXOSC1-203ENST00000370886 CXCL9Q07325 125 aa13.36□□□□□ -0.27
EXOSC1-203ENST00000370886 MPHOSPH8Q99549 860 aa13.36□□□□□ -0.27
EXOSC1-203ENST00000370886 DDX19BQ9UMR2 479 aa13.36□□□□□ -0.27
EXOSC1-203ENST00000370886 TNIP1Q15025 636 aa13.35□□□□□ -0.27
EXOSC1-203ENST00000370886 KLHDC4Q8TBB5 520 aa13.35□□□□□ -0.27
EXOSC1-203ENST00000370886 NSFL1CQ9UNZ2 370 aaKnown RBP13.35□□□□□ -0.27
EXOSC1-203ENST00000370886 ATP6V0A2Q9Y487 856 aa13.35□□□□□ -0.27
EXOSC1-203ENST00000370886 CENPBP07199 599 aaPredicted RBP13.34□□□□□ -0.27
EXOSC1-203ENST00000370886 SOX10P56693 466 aa13.34□□□□□ -0.27
EXOSC1-203ENST00000370886 SP8Q8IXZ3 490 aa13.34□□□□□ -0.27
EXOSC1-203ENST00000370886 CRBNQ96SW2 442 aa13.34□□□□□ -0.27
EXOSC1-203ENST00000370886 RTFDC1Q9BY42 306 aaPredicted RBP13.34□□□□□ -0.27
EXOSC1-203ENST00000370886 CNNM1Q9NRU3 951 aa13.34□□□□□ -0.27
EXOSC1-203ENST00000370886 ANKIB1Q9P2G1 1089 aa13.34□□□□□ -0.27
EXOSC1-203ENST00000370886 CACNA1FO60840 1977 aa13.33□□□□□ -0.28
EXOSC1-203ENST00000370886 H7C1D1 291 aa13.33□□□□□ -0.28
EXOSC1-203ENST00000370886 SRGAP3O43295 1099 aa13.33□□□□□ -0.28
EXOSC1-203ENST00000370886 GPSM2P81274 684 aa13.33□□□□□ -0.28
EXOSC1-203ENST00000370886 RABL6Q3YEC7 729 aaPredicted RBP13.33□□□□□ -0.28
EXOSC1-203ENST00000370886 RGMBQ6NW40 437 aa13.33□□□□□ -0.28
EXOSC1-203ENST00000370886 DPP8Q6V1X1 898 aaPredicted RBP13.33□□□□□ -0.28
EXOSC1-203ENST00000370886 LDHAL6AQ6ZMR3 332 aa13.33□□□□□ -0.28
EXOSC1-203ENST00000370886 MPNDQ8N594 471 aa13.33□□□□□ -0.28
EXOSC1-203ENST00000370886 TRPM4Q8TD43 1214 aa13.33□□□□□ -0.28
EXOSC1-203ENST00000370886 CCDC102AQ96A19 550 aa13.33□□□□□ -0.28
EXOSC1-203ENST00000370886 SIL1Q9H173 461 aa13.33□□□□□ -0.28
EXOSC1-203ENST00000370886 CHMP4BQ9H444 224 aaKnown RBP13.33□□□□□ -0.28
EXOSC1-203ENST00000370886 C6orf229H3BNL8 230 aa13.32□□□□□ -0.28
EXOSC1-203ENST00000370886 RAD17O75943 681 aa13.32□□□□□ -0.28
EXOSC1-203ENST00000370886 KIAA2012Q0VF49 1180 aa13.32□□□□□ -0.28
EXOSC1-203ENST00000370886 TMC4Q7Z404 712 aa13.32□□□□□ -0.28
EXOSC1-203ENST00000370886 C2orf69Q8N8R5 385 aa13.32□□□□□ -0.28
EXOSC1-203ENST00000370886 HELBQ8NG08 1087 aaPredicted RBP13.32□□□□□ -0.28
EXOSC1-203ENST00000370886 PUS3Q9BZE2 481 aaKnown RBP13.32□□□□□ -0.28
EXOSC1-203ENST00000370886 BSDC1Q9NW68 430 aaPredicted RBP13.32□□□□□ -0.28
EXOSC1-203ENST00000370886 RTL9Q8NET4 1388 aa13.32□□□□□ -0.28
EXOSC1-203ENST00000370886 POLR2AP24928 1970 aaKnown RBP13.31□□□□□ -0.28
EXOSC1-203ENST00000370886 HIRAP54198 1017 aaPredicted RBP13.31□□□□□ -0.28
EXOSC1-203ENST00000370886 ZIC5Q96T25 663 aa13.31□□□□□ -0.28
EXOSC1-203ENST00000370886 GBA2Q9HCG7 927 aaPredicted RBP13.31□□□□□ -0.28
EXOSC1-203ENST00000370886 ZBTB40Q9NUA8 1239 aa13.31□□□□□ -0.28
EXOSC1-203ENST00000370886 CNOT7Q9UIV1 285 aaKnown RBP13.31□□□□□ -0.28
EXOSC1-203ENST00000370886 PA2G4Q9UQ80 394 aaKnown RBP13.31□□□□□ -0.28
EXOSC1-203ENST00000370886 PNMA6EA0A0J9YXQ4 647 aa13.3□□□□□ -0.28
EXOSC1-203ENST00000370886 RIMBP2O15034 1052 aa13.3□□□□□ -0.28
EXOSC1-203ENST00000370886 TAF5LO75529 589 aa13.3□□□□□ -0.28
EXOSC1-203ENST00000370886 UFL1O94874 794 aa13.3□□□□□ -0.28
EXOSC1-203ENST00000370886 KCNJ4P48050 445 aa13.3□□□□□ -0.28
EXOSC1-203ENST00000370886 LRRC24Q50LG9 513 aa13.3□□□□□ -0.28
EXOSC1-203ENST00000370886 KRT26Q7Z3Y9 468 aa13.3□□□□□ -0.28
EXOSC1-203ENST00000370886 CTU1Q7Z7A3 348 aaKnown RBP13.3□□□□□ -0.28
EXOSC1-203ENST00000370886 USP48Q86UV5 1035 aa13.3□□□□□ -0.28
EXOSC1-203ENST00000370886 MICALL2Q8IY33 904 aa13.3□□□□□ -0.28
EXOSC1-203ENST00000370886 BCL11AQ9H165 835 aa13.3□□□□□ -0.28
EXOSC1-203ENST00000370886 MINPP1Q9UNW1 487 aa13.3□□□□□ -0.28
EXOSC1-203ENST00000370886 FAM155AB1AL88 458 aaPredicted RBP13.29□□□□□ -0.28
EXOSC1-203ENST00000370886 ZNF157P51786 506 aaPredicted RBP13.29□□□□□ -0.28
EXOSC1-203ENST00000370886 ATP8B2P98198 1209 aa13.29□□□□□ -0.28
EXOSC1-203ENST00000370886 KIF23Q02241 960 aaPredicted RBP13.29□□□□□ -0.28
EXOSC1-203ENST00000370886 CHRNDQ07001 517 aa13.29□□□□□ -0.28
EXOSC1-203ENST00000370886 OS9Q13438 667 aaPredicted RBP13.29□□□□□ -0.28
EXOSC1-203ENST00000370886 METTL24Q5JXM2 366 aa13.29□□□□□ -0.28
EXOSC1-203ENST00000370886 DPF2Q92785 391 aa13.29□□□□□ -0.28
EXOSC1-203ENST00000370886 ANKRD2Q9GZV1 360 aa13.29□□□□□ -0.28
EXOSC1-203ENST00000370886 GGA1Q9UJY5 639 aa13.29□□□□□ -0.28
EXOSC1-203ENST00000370886 DDX60Q8IY21 1712 aaKnown RBP13.29□□□□□ -0.28
EXOSC1-203ENST00000370886 LAMB2P55268 1798 aa13.28□□□□□ -0.28
EXOSC1-203ENST00000370886 WTIPA6NIX2 430 aaPredicted RBP13.28□□□□□ -0.28
EXOSC1-203ENST00000370886 G3V3G9 751 aa13.28□□□□□ -0.28
EXOSC1-203ENST00000370886 TRPA1O75762 1119 aa13.28□□□□□ -0.28
EXOSC1-203ENST00000370886 RFX5P48382 616 aaPredicted RBP13.28□□□□□ -0.28
EXOSC1-203ENST00000370886 PTPN12Q05209 780 aaKnown RBP13.28□□□□□ -0.28
EXOSC1-203ENST00000370886 DCAF8Q5TAQ9 597 aa13.28□□□□□ -0.28
EXOSC1-203ENST00000370886 CEP85Q6P2H3 762 aa13.28□□□□□ -0.28
EXOSC1-203ENST00000370886 REM2Q8IYK8 340 aaPredicted RBP13.28□□□□□ -0.28
EXOSC1-203ENST00000370886 EXOC6Q8TAG9 804 aa13.28□□□□□ -0.28
EXOSC1-203ENST00000370886 TBC1D16Q8TBP0 767 aa13.28□□□□□ -0.28
EXOSC1-203ENST00000370886 DCPSQ96C86 337 aaKnown RBP13.28□□□□□ -0.28
EXOSC1-203ENST00000370886 GCC1Q96CN9 775 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms