RNA–Protein interactions for RNA: ENST00000369047.8

ECM1-202, Transcript of extracellular matrix protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM1, Length 2,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-202ENST00000369047 AKT1S1Q96B36 256 aa15.64■□□□□ 0.09
ECM1-202ENST00000369047 ZNF594Q96JF6 807 aaPredicted RBP15.64■□□□□ 0.09
ECM1-202ENST00000369047 RBM27Q9P2N5 1060 aaKnown RBP15.64■□□□□ 0.09
ECM1-202ENST00000369047 GOLIM4O00461 696 aa15.64■□□□□ 0.09
ECM1-202ENST00000369047 LETM1O95202 739 aaPredicted RBP15.64■□□□□ 0.09
ECM1-202ENST00000369047 CYP19A1P11511 503 aaPredicted RBP15.64■□□□□ 0.09
ECM1-202ENST00000369047 IFIT5Q13325 482 aaKnown RBP15.64■□□□□ 0.09
ECM1-202ENST00000369047 TOB2Q14106 344 aaPredicted RBP15.64■□□□□ 0.09
ECM1-202ENST00000369047 LINC00116Q8NCU8 138 aa15.64■□□□□ 0.09
ECM1-202ENST00000369047 NSFL1CQ9UNZ2 370 aaKnown RBP15.64■□□□□ 0.09
ECM1-202ENST00000369047 MTMR6Q9Y217 621 aa15.64■□□□□ 0.09
ECM1-202ENST00000369047 ABCC12Q96J65 1359 aa15.63■□□□□ 0.09
ECM1-202ENST00000369047 ERVV-1B6SEH8 477 aa15.63■□□□□ 0.09
ECM1-202ENST00000369047 RNF113AO15541 343 aaKnown RBP15.63■□□□□ 0.09
ECM1-202ENST00000369047 UBE2HP62256 183 aa15.63■□□□□ 0.09
ECM1-202ENST00000369047 LARP1BQ659C4 914 aaKnown RBP15.63■□□□□ 0.09
ECM1-202ENST00000369047 SLC4A9Q96Q91 983 aa15.63■□□□□ 0.09
ECM1-202ENST00000369047 ZNF330Q9Y3S2 320 aaPredicted RBP15.63■□□□□ 0.09
ECM1-202ENST00000369047 EP400Q96L91 3159 aa15.63■□□□□ 0.09
ECM1-202ENST00000369047 ZFYP08048 801 aaPredicted RBP15.63■□□□□ 0.09
ECM1-202ENST00000369047 ST3GAL1Q11201 340 aa15.63■□□□□ 0.09
ECM1-202ENST00000369047 PUS3Q9BZE2 481 aaKnown RBP15.63■□□□□ 0.09
ECM1-202ENST00000369047 TFCP2L1Q9NZI6 479 aa15.63■□□□□ 0.09
ECM1-202ENST00000369047 NDUFB9Q9Y6M9 179 aa15.63■□□□□ 0.09
ECM1-202ENST00000369047 TCHHQ07283 1943 aa15.62■□□□□ 0.09
ECM1-202ENST00000369047 SYCE3A1L190 88 aa15.62■□□□□ 0.09
ECM1-202ENST00000369047 CYP21A2P08686 494 aa15.62■□□□□ 0.09
ECM1-202ENST00000369047 TAF7LQ5H9L4 462 aa15.62■□□□□ 0.09
ECM1-202ENST00000369047 FAM89AQ96GI7 184 aa15.62■□□□□ 0.09
ECM1-202ENST00000369047 SEC62Q99442 399 aaKnown RBP15.62■□□□□ 0.09
ECM1-202ENST00000369047 CCDC87Q9NVE4 849 aa15.62■□□□□ 0.09
ECM1-202ENST00000369047 ADRA2BP18089 450 aa15.61■□□□□ 0.09
ECM1-202ENST00000369047 KCNQ4P56696 695 aa15.61■□□□□ 0.09
ECM1-202ENST00000369047 GORABQ5T7V8 394 aa15.61■□□□□ 0.09
ECM1-202ENST00000369047 NLRP10Q86W26 655 aa15.61■□□□□ 0.09
ECM1-202ENST00000369047 NECAB1Q8N987 351 aa15.61■□□□□ 0.09
ECM1-202ENST00000369047 CHMP4CQ96CF2 233 aa15.61■□□□□ 0.09
ECM1-202ENST00000369047 RBSNQ9H1K0 784 aa15.61■□□□□ 0.09
ECM1-202ENST00000369047 CNPY2Q9Y2B0 182 aa15.61■□□□□ 0.09
ECM1-202ENST00000369047 RTCBQ9Y3I0 505 aaKnown RBP15.61■□□□□ 0.09
ECM1-202ENST00000369047 IL6STP40189 918 aaPredicted RBP15.61■□□□□ 0.09
ECM1-202ENST00000369047 CRKLP46109 303 aaKnown RBP15.61■□□□□ 0.09
ECM1-202ENST00000369047 TTC39AQ5SRH9 613 aa15.61■□□□□ 0.09
ECM1-202ENST00000369047 CCDC129Q6ZRS4 1044 aa15.61■□□□□ 0.09
ECM1-202ENST00000369047 ANO8Q9HCE9 1232 aaPredicted RBP15.61■□□□□ 0.09
ECM1-202ENST00000369047 GNPATO15228 680 aa15.6■□□□□ 0.09
ECM1-202ENST00000369047 GADD45BO75293 160 aaPredicted RBP15.6■□□□□ 0.09
ECM1-202ENST00000369047 RPS6KA4O75676 772 aa15.6■□□□□ 0.09
ECM1-202ENST00000369047 ZNF827Q17R98 1081 aa15.6■□□□□ 0.09
ECM1-202ENST00000369047 XAGE2Q96GT9 111 aa15.6■□□□□ 0.09
ECM1-202ENST00000369047 TAF6LQ9Y6J9 622 aa15.6■□□□□ 0.09
ECM1-202ENST00000369047 ANKRD36CQ5JPF3 1778 aa15.6■□□□□ 0.09
ECM1-202ENST00000369047 UBR3Q6ZT12 1888 aa15.6■□□□□ 0.09
ECM1-202ENST00000369047 FOXD4L6Q3SYB3 417 aaPredicted RBP15.59■□□□□ 0.09
ECM1-202ENST00000369047 FOXD4L3Q6VB84 417 aaPredicted RBP15.59■□□□□ 0.09
ECM1-202ENST00000369047 DHX32Q7L7V1 743 aaKnown RBP15.59■□□□□ 0.09
ECM1-202ENST00000369047 TTLL11Q8NHH1 800 aa15.59■□□□□ 0.09
ECM1-202ENST00000369047 GDPD2Q9HCC8 539 aa15.59■□□□□ 0.09
ECM1-202ENST00000369047 RRAGDQ9NQL2 400 aaPredicted RBP15.59■□□□□ 0.09
ECM1-202ENST00000369047 ANKRD18BA2A2Z9 1011 aa15.59■□□□□ 0.09
ECM1-202ENST00000369047 CLCN1P35523 988 aa15.59■□□□□ 0.09
ECM1-202ENST00000369047 R3HDM1Q15032 1099 aaKnown RBP15.59■□□□□ 0.09
ECM1-202ENST00000369047 HLFQ16534 295 aa15.59■□□□□ 0.09
ECM1-202ENST00000369047 HS1BP3Q53T59 392 aa15.59■□□□□ 0.09
ECM1-202ENST00000369047 CCDC183Q5T5S1 534 aa15.59■□□□□ 0.09
ECM1-202ENST00000369047 ZNF512BQ96KM6 892 aaPredicted RBP15.59■□□□□ 0.09
ECM1-202ENST00000369047 TSPY26PQ9H489 355 aa15.59■□□□□ 0.09
ECM1-202ENST00000369047 RIPOR2Q9Y4F9 1068 aa15.59■□□□□ 0.09
ECM1-202ENST00000369047 VPS37CA5D8V6 355 aaPredicted RBP15.58■□□□□ 0.09
ECM1-202ENST00000369047 HSPD1P10809 573 aaKnown RBP15.58■□□□□ 0.09
ECM1-202ENST00000369047 Q6ZUG5 572 aa15.58■□□□□ 0.09
ECM1-202ENST00000369047 SLC16A10Q8TF71 515 aa15.58■□□□□ 0.09
ECM1-202ENST00000369047 GTF3C6Q969F1 213 aa15.58■□□□□ 0.09
ECM1-202ENST00000369047 LLPHQ9BRT6 129 aaKnown RBP15.58■□□□□ 0.09
ECM1-202ENST00000369047 CTNNA3Q9UI47 895 aa15.58■□□□□ 0.09
ECM1-202ENST00000369047 ESPNB1AK53 854 aa15.58■□□□□ 0.08
ECM1-202ENST00000369047 CTSWP56202 376 aa15.58■□□□□ 0.08
ECM1-202ENST00000369047 MYH3P11055 1940 aa15.57■□□□□ 0.08
ECM1-202ENST00000369047 PDE8AO60658 829 aa15.57■□□□□ 0.08
ECM1-202ENST00000369047 ITGA6P23229 1130 aa15.57■□□□□ 0.08
ECM1-202ENST00000369047 KRT85P78386 507 aa15.57■□□□□ 0.08
ECM1-202ENST00000369047 FKBP4Q02790 459 aaKnown RBP eCLIP15.57■□□□□ 0.08
ECM1-202ENST00000369047 TRAPPC3LQ5T215 181 aa15.57■□□□□ 0.08
ECM1-202ENST00000369047 LDHAL6AQ6ZMR3 332 aa15.57■□□□□ 0.08
ECM1-202ENST00000369047 FAM184AQ8NB25 1140 aa15.57■□□□□ 0.08
ECM1-202ENST00000369047 TCEANC2Q96MN5 208 aa15.57■□□□□ 0.08
ECM1-202ENST00000369047 AGXT2Q9BYV1 514 aa15.57■□□□□ 0.08
ECM1-202ENST00000369047 TRMT112Q9UI30 125 aaKnown RBP15.57■□□□□ 0.08
ECM1-202ENST00000369047 MAST3O60307 1309 aa15.57■□□□□ 0.08
ECM1-202ENST00000369047 ELP1O95163 1332 aa15.57■□□□□ 0.08
ECM1-202ENST00000369047 NUP98P52948 1817 aa15.57■□□□□ 0.08
ECM1-202ENST00000369047 IRS4O14654 1257 aaPredicted RBP15.56■□□□□ 0.08
ECM1-202ENST00000369047 CHGBP05060 677 aa15.56■□□□□ 0.08
ECM1-202ENST00000369047 FGD1P98174 961 aa15.56■□□□□ 0.08
ECM1-202ENST00000369047 EXOSC10Q01780 885 aaKnown RBP15.56■□□□□ 0.08
ECM1-202ENST00000369047 DNM1Q05193 864 aaKnown RBP15.56■□□□□ 0.08
ECM1-202ENST00000369047 COL9A3Q14050 684 aaPredicted RBP15.56■□□□□ 0.08
ECM1-202ENST00000369047 INTS5Q6P9B9 1019 aaKnown RBP15.56■□□□□ 0.08
ECM1-202ENST00000369047 FBXL16Q8N461 479 aa15.56■□□□□ 0.08
ECM1-202ENST00000369047 PDLIM2Q96JY6 352 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms