RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 ITPRIPQ8IWB1 547 aa23.08■■□□□ 1.29
CHTOP-202ENST00000368687 ADARB2Q9NS39 739 aaKnown RBP23.08■■□□□ 1.29
CHTOP-202ENST00000368687 USP17L3A6NCW0 530 aa23.07■■□□□ 1.28
CHTOP-202ENST00000368687 USP17L4A6NCW7 530 aa23.07■■□□□ 1.28
CHTOP-202ENST00000368687 TAF5LO75529 589 aa23.07■■□□□ 1.28
CHTOP-202ENST00000368687 METTL24Q5JXM2 366 aa23.07■■□□□ 1.28
CHTOP-202ENST00000368687 CHADLQ6NUI6 762 aa23.07■■□□□ 1.28
CHTOP-202ENST00000368687 USP17L1Q7RTZ2 530 aa23.07■■□□□ 1.28
CHTOP-202ENST00000368687 CHMP4BQ9H444 224 aaKnown RBP23.07■■□□□ 1.28
CHTOP-202ENST00000368687 MYO3BQ8WXR4 1341 aa23.07■■□□□ 1.28
CHTOP-202ENST00000368687 ADAMTSL1Q8N6G6 1762 aa23.06■■□□□ 1.28
CHTOP-202ENST00000368687 H7C1D1 291 aa23.06■■□□□ 1.28
CHTOP-202ENST00000368687 EYA2O00167 538 aa23.06■■□□□ 1.28
CHTOP-202ENST00000368687 RFX5P48382 616 aaPredicted RBP23.06■■□□□ 1.28
CHTOP-202ENST00000368687 MMP14P50281 582 aa23.06■■□□□ 1.28
CHTOP-202ENST00000368687 PTPN12Q05209 780 aaKnown RBP23.06■■□□□ 1.28
CHTOP-202ENST00000368687 AGBL3Q8NEM8 1001 aa23.06■■□□□ 1.28
CHTOP-202ENST00000368687 HELBQ8NG08 1087 aaPredicted RBP23.06■■□□□ 1.28
CHTOP-202ENST00000368687 TNNQ9UQP3 1299 aa23.06■■□□□ 1.28
CHTOP-202ENST00000368687 PLIN1O60240 522 aa23.05■■□□□ 1.28
CHTOP-202ENST00000368687 PDE8BO95263 885 aa23.05■■□□□ 1.28
CHTOP-202ENST00000368687 EAPPQ56P03 285 aaPredicted RBP23.05■■□□□ 1.28
CHTOP-202ENST00000368687 STRIP1Q5VSL9 837 aa23.05■■□□□ 1.28
CHTOP-202ENST00000368687 PUS3Q9BZE2 481 aaKnown RBP23.05■■□□□ 1.28
CHTOP-202ENST00000368687 SRGAP3O43295 1099 aa23.04■■□□□ 1.28
CHTOP-202ENST00000368687 EPS15P42566 896 aa23.04■■□□□ 1.28
CHTOP-202ENST00000368687 RSBN1LQ6PCB5 846 aaPredicted RBP23.04■■□□□ 1.28
CHTOP-202ENST00000368687 COPRSQ9NQ92 184 aa23.04■■□□□ 1.28
CHTOP-202ENST00000368687 CNOT7Q9UIV1 285 aaKnown RBP23.04■■□□□ 1.28
CHTOP-202ENST00000368687 IRS2Q9Y4H2 1338 aa23.04■■□□□ 1.28
CHTOP-202ENST00000368687 IL15P40933 162 aaPredicted RBP23.03■■□□□ 1.28
CHTOP-202ENST00000368687 PUM3Q15397 648 aaKnown RBP23.03■■□□□ 1.28
CHTOP-202ENST00000368687 LRRC24Q50LG9 513 aa23.03■■□□□ 1.28
CHTOP-202ENST00000368687 TXNRD3Q86VQ6 643 aa23.03■■□□□ 1.28
CHTOP-202ENST00000368687 WTIPA6NIX2 430 aaPredicted RBP23.02■■□□□ 1.28
CHTOP-202ENST00000368687 RLBP1P12271 317 aa23.02■■□□□ 1.28
CHTOP-202ENST00000368687 MICALL2Q8IY33 904 aa23.02■■□□□ 1.28
CHTOP-202ENST00000368687 VGLL2Q8N8G2 317 aa23.02■■□□□ 1.28
CHTOP-202ENST00000368687 KLHDC4Q8TBB5 520 aa23.02■■□□□ 1.28
CHTOP-202ENST00000368687 ZC3H15Q8WU90 426 aaKnown RBP23.02■■□□□ 1.28
CHTOP-202ENST00000368687 CD209Q9NNX6 404 aa23.02■■□□□ 1.28
CHTOP-202ENST00000368687 CLEC11AQ9Y240 323 aa23.02■■□□□ 1.28
CHTOP-202ENST00000368687 IL1R1P14778 569 aa23.01■■□□□ 1.27
CHTOP-202ENST00000368687 KLRK1P26718 216 aa23.01■■□□□ 1.27
CHTOP-202ENST00000368687 CAVIN4Q5BKX8 364 aa23.01■■□□□ 1.27
CHTOP-202ENST00000368687 KCNQ5Q9NR82 932 aa23.01■■□□□ 1.27
CHTOP-202ENST00000368687 DDX19BQ9UMR2 479 aa23.01■■□□□ 1.27
CHTOP-202ENST00000368687 ZBTB12Q9Y330 459 aaPredicted RBP23.01■■□□□ 1.27
CHTOP-202ENST00000368687 ZBTB7BO15156 539 aaPredicted RBP23■■□□□ 1.27
CHTOP-202ENST00000368687 IFIT1P09914 478 aaKnown RBP23■■□□□ 1.27
CHTOP-202ENST00000368687 PDE3AQ14432 1141 aa23■■□□□ 1.27
CHTOP-202ENST00000368687 TTLL5Q6EMB2 1281 aa23■■□□□ 1.27
CHTOP-202ENST00000368687 VPS37DQ86XT2 251 aa23■■□□□ 1.27
CHTOP-202ENST00000368687 YTHDC1Q96MU7 727 aaKnown RBP23■■□□□ 1.27
CHTOP-202ENST00000368687 CEP126Q9P2H0 1117 aa23■■□□□ 1.27
CHTOP-202ENST00000368687 ZNF646O15015 1829 aaPredicted RBP22.99■■□□□ 1.27
CHTOP-202ENST00000368687 HIBADHP31937 336 aaKnown RBP22.99■■□□□ 1.27
CHTOP-202ENST00000368687 MVPQ14764 893 aaKnown RBP22.99■■□□□ 1.27
CHTOP-202ENST00000368687 DACT2Q5SW24 774 aa22.99■■□□□ 1.27
CHTOP-202ENST00000368687 OGFOD1Q8N543 542 aa22.99■■□□□ 1.27
CHTOP-202ENST00000368687 PANK1Q8TE04 598 aa22.99■■□□□ 1.27
CHTOP-202ENST00000368687 KLRG1Q96E93 195 aa22.99■■□□□ 1.27
CHTOP-202ENST00000368687 SNAP23O00161 211 aa22.98■■□□□ 1.27
CHTOP-202ENST00000368687 SLC5A1P13866 664 aa22.98■■□□□ 1.27
CHTOP-202ENST00000368687 FKBP1AP62942 108 aaKnown RBP22.98■■□□□ 1.27
CHTOP-202ENST00000368687 ATG9AQ7Z3C6 839 aa22.98■■□□□ 1.27
CHTOP-202ENST00000368687 LPIN2Q92539 896 aa22.98■■□□□ 1.27
CHTOP-202ENST00000368687 SIL1Q9H173 461 aa22.98■■□□□ 1.27
CHTOP-202ENST00000368687 PASKQ96RG2 1323 aa22.98■■□□□ 1.27
CHTOP-202ENST00000368687 USP17L8P0C7I0 530 aa22.97■■□□□ 1.27
CHTOP-202ENST00000368687 ZNF280AP59817 542 aaPredicted RBP22.97■■□□□ 1.27
CHTOP-202ENST00000368687 FBXW7Q969H0 707 aa22.97■■□□□ 1.27
CHTOP-202ENST00000368687 GMLQ99445 158 aa22.97■■□□□ 1.27
CHTOP-202ENST00000368687 PCNTO95613 3336 aa22.96■■□□□ 1.27
CHTOP-202ENST00000368687 SASH1O94885 1247 aa22.96■■□□□ 1.27
CHTOP-202ENST00000368687 ITGBL1O95965 494 aaPredicted RBP22.96■■□□□ 1.27
CHTOP-202ENST00000368687 FGFR2P21802 821 aa22.96■■□□□ 1.27
CHTOP-202ENST00000368687 FAM84BQ96KN1 310 aaPredicted RBP22.96■■□□□ 1.27
CHTOP-202ENST00000368687 GTF2IP78347 998 aa22.95■■□□□ 1.26
CHTOP-202ENST00000368687 MAP1SQ66K74 1059 aaPredicted RBP22.95■■□□□ 1.26
CHTOP-202ENST00000368687 CNTROBQ8N137 903 aa22.95■■□□□ 1.26
CHTOP-202ENST00000368687 TDRD7Q8NHU6 1098 aaKnown RBP22.95■■□□□ 1.26
CHTOP-202ENST00000368687 PGAP2Q9UHJ9 254 aa22.95■■□□□ 1.26
CHTOP-202ENST00000368687 HDAC9Q9UKV0 1011 aa22.95■■□□□ 1.26
CHTOP-202ENST00000368687 AKAP2Q9Y2D5 859 aa22.95■■□□□ 1.26
CHTOP-202ENST00000368687 FAM205AQ6ZU69 1335 aa22.94■■□□□ 1.26
CHTOP-202ENST00000368687 ATP8B2P98198 1209 aa22.94■■□□□ 1.26
CHTOP-202ENST00000368687 ATP2B3Q16720 1220 aa22.94■■□□□ 1.26
CHTOP-202ENST00000368687 KIF4BQ2VIQ3 1234 aa22.94■■□□□ 1.26
CHTOP-202ENST00000368687 FBXO33Q7Z6M2 555 aa22.94■■□□□ 1.26
CHTOP-202ENST00000368687 SSH3Q8TE77 659 aa22.94■■□□□ 1.26
CHTOP-202ENST00000368687 PA2G4Q9UQ80 394 aaKnown RBP22.94■■□□□ 1.26
CHTOP-202ENST00000368687 ARAP2Q8WZ64 1704 aa22.94■■□□□ 1.26
CHTOP-202ENST00000368687 MYH13Q9UKX3 1938 aa22.93■■□□□ 1.26
CHTOP-202ENST00000368687 PNMA6EA0A0J9YXQ4 647 aa22.93■■□□□ 1.26
CHTOP-202ENST00000368687 GYG1P46976 350 aa22.93■■□□□ 1.26
CHTOP-202ENST00000368687 G3BP1Q13283 466 aaKnown RBP eCLIP22.93■■□□□ 1.26
CHTOP-202ENST00000368687 TRPM4Q8TD43 1214 aa22.93■■□□□ 1.26
CHTOP-202ENST00000368687 FRAT2O75474 233 aaPredicted RBP22.92■■□□□ 1.26
CHTOP-202ENST00000368687 POLA2Q14181 598 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms