RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 FMR1NBQ8N0W7 255 aaPredicted RBP20.73■□□□□ 0.91
CHTOP-201ENST00000368686 ZNF622Q969S3 477 aaKnown RBP eCLIP20.73■□□□□ 0.91
CHTOP-201ENST00000368686 CEP89Q96ST8 783 aa20.73■□□□□ 0.91
CHTOP-201ENST00000368686 SLC52A1Q9NWF4 448 aa20.73■□□□□ 0.91
CHTOP-201ENST00000368686 PPP2R2CQ9Y2T4 447 aa20.73■□□□□ 0.91
CHTOP-201ENST00000368686 CBFA2T2O43439 604 aa20.72■□□□□ 0.91
CHTOP-201ENST00000368686 GNG11P61952 73 aa20.72■□□□□ 0.91
CHTOP-201ENST00000368686 FANCCQ00597 558 aa20.72■□□□□ 0.91
CHTOP-201ENST00000368686 MRPS27Q92552 414 aaKnown RBP20.72■□□□□ 0.91
CHTOP-201ENST00000368686 CCDC172P0C7W6 258 aa20.71■□□□□ 0.91
CHTOP-201ENST00000368686 ME1P48163 572 aa20.71■□□□□ 0.91
CHTOP-201ENST00000368686 GSCP56915 257 aaPredicted RBP20.71■□□□□ 0.91
CHTOP-201ENST00000368686 CLASRPQ8N2M8 674 aaKnown RBP20.71■□□□□ 0.91
CHTOP-201ENST00000368686 ERLIN1O75477 346 aa20.71■□□□□ 0.91
CHTOP-201ENST00000368686 USP5P45974 858 aa20.71■□□□□ 0.91
CHTOP-201ENST00000368686 SART3Q15020 963 aaKnown RBP20.71■□□□□ 0.91
CHTOP-201ENST00000368686 BEND6Q5SZJ8 279 aaPredicted RBP20.71■□□□□ 0.91
CHTOP-201ENST00000368686 ERCC4Q92889 916 aaPredicted RBP20.71■□□□□ 0.91
CHTOP-201ENST00000368686 USP28Q96RU2 1077 aa20.71■□□□□ 0.91
CHTOP-201ENST00000368686 CEP83Q9Y592 693 aa20.71■□□□□ 0.91
CHTOP-201ENST00000368686 MON2Q7Z3U7 1717 aa20.7■□□□□ 0.9
CHTOP-201ENST00000368686 IKBKBO14920 756 aa20.7■□□□□ 0.9
CHTOP-201ENST00000368686 MCM6Q14566 821 aa20.7■□□□□ 0.9
CHTOP-201ENST00000368686 NCAPHQ15003 741 aa20.7■□□□□ 0.9
CHTOP-201ENST00000368686 ERC1Q8IUD2 1116 aa20.7■□□□□ 0.9
CHTOP-201ENST00000368686 WDR24Q96S15 920 aa20.7■□□□□ 0.9
CHTOP-201ENST00000368686 RGPD1P0DJD0 1748 aa20.7■□□□□ 0.9
CHTOP-201ENST00000368686 NLRP12P59046 1061 aa20.7■□□□□ 0.9
CHTOP-201ENST00000368686 LLPHQ9BRT6 129 aaKnown RBP20.7■□□□□ 0.9
CHTOP-201ENST00000368686 ABCC6O95255 1503 aa20.7■□□□□ 0.9
CHTOP-201ENST00000368686 MYO5BQ9ULV0 1848 aa20.69■□□□□ 0.9
CHTOP-201ENST00000368686 NMIQ13287 307 aaPredicted RBP20.69■□□□□ 0.9
CHTOP-201ENST00000368686 KRT32Q14532 448 aa20.69■□□□□ 0.9
CHTOP-201ENST00000368686 LRRC31Q6UY01 552 aa20.69■□□□□ 0.9
CHTOP-201ENST00000368686 FAM177A1Q8N128 213 aaPredicted RBP20.69■□□□□ 0.9
CHTOP-201ENST00000368686 FAM71BQ8TC56 605 aa20.69■□□□□ 0.9
CHTOP-201ENST00000368686 KIFC2Q96AC6 838 aa20.69■□□□□ 0.9
CHTOP-201ENST00000368686 FTOQ9C0B1 505 aaKnown RBP eCLIP20.69■□□□□ 0.9
CHTOP-201ENST00000368686 FAM107BQ9H098 131 aa20.69■□□□□ 0.9
CHTOP-201ENST00000368686 FAN1Q9Y2M0 1017 aa20.69■□□□□ 0.9
CHTOP-201ENST00000368686 OS9Q13438 667 aaPredicted RBP20.69■□□□□ 0.9
CHTOP-201ENST00000368686 TADA2BQ86TJ2 420 aa20.69■□□□□ 0.9
CHTOP-201ENST00000368686 SMARCC2Q8TAQ2 1214 aa20.69■□□□□ 0.9
CHTOP-201ENST00000368686 FAM227BQ96M60 508 aa20.69■□□□□ 0.9
CHTOP-201ENST00000368686 RAB21Q9UL25 225 aa20.69■□□□□ 0.9
CHTOP-201ENST00000368686 ALKQ9UM73 1620 aa20.68■□□□□ 0.9
CHTOP-201ENST00000368686 A0A087WUV0 522 aaPredicted RBP20.68■□□□□ 0.9
CHTOP-201ENST00000368686 A0A1W2PQ27 194 aa20.68■□□□□ 0.9
CHTOP-201ENST00000368686 A0A1W2PQ64 194 aa20.68■□□□□ 0.9
CHTOP-201ENST00000368686 A0A1W2PQD8 194 aa20.68■□□□□ 0.9
CHTOP-201ENST00000368686 TUBB4BP68371 445 aa20.68■□□□□ 0.9
CHTOP-201ENST00000368686 CT47A1Q5JQC4 288 aaPredicted RBP20.68■□□□□ 0.9
CHTOP-201ENST00000368686 CXorf56Q9H5V9 222 aa20.68■□□□□ 0.9
CHTOP-201ENST00000368686 AKAP2Q9Y2D5 859 aa20.68■□□□□ 0.9
CHTOP-201ENST00000368686 CPS1P31327 1500 aa20.68■□□□□ 0.9
CHTOP-201ENST00000368686 PPFIA4O75335 1185 aa20.67■□□□□ 0.9
CHTOP-201ENST00000368686 HSP90B2PQ58FF3 399 aa20.67■□□□□ 0.9
CHTOP-201ENST00000368686 FMNL2Q96PY5 1086 aa20.67■□□□□ 0.9
CHTOP-201ENST00000368686 CHMP4BP1P59074 171 aa20.67■□□□□ 0.9
CHTOP-201ENST00000368686 ADALQ6DHV7 355 aa20.67■□□□□ 0.9
CHTOP-201ENST00000368686 DHX58Q96C10 678 aa20.67■□□□□ 0.9
CHTOP-201ENST00000368686 SENP3Q9H4L4 574 aaPredicted RBP20.67■□□□□ 0.9
CHTOP-201ENST00000368686 JCADQ9P266 1359 aa20.67■□□□□ 0.9
CHTOP-201ENST00000368686 C3P01024 1663 aa20.66■□□□□ 0.9
CHTOP-201ENST00000368686 LMOD1P29536 600 aaPredicted RBP20.66■□□□□ 0.9
CHTOP-201ENST00000368686 EIF5P55010 431 aaKnown RBP20.66■□□□□ 0.9
CHTOP-201ENST00000368686 UBASH3AP57075 661 aa20.66■□□□□ 0.9
CHTOP-201ENST00000368686 SRGAP1Q7Z6B7 1085 aa20.66■□□□□ 0.9
CHTOP-201ENST00000368686 TMEM139Q8IV31 216 aa20.66■□□□□ 0.9
CHTOP-201ENST00000368686 VSTM4Q8IW00 320 aa20.66■□□□□ 0.9
CHTOP-201ENST00000368686 L1RE1Q9UN81 338 aa20.66■□□□□ 0.9
CHTOP-201ENST00000368686 TOP1P11387 765 aaKnown RBP20.66■□□□□ 0.9
CHTOP-201ENST00000368686 E2F4Q16254 413 aa20.66■□□□□ 0.9
CHTOP-201ENST00000368686 MSANTD4Q8NCY6 345 aa20.66■□□□□ 0.9
CHTOP-201ENST00000368686 ACBD3Q9H3P7 528 aa20.66■□□□□ 0.9
CHTOP-201ENST00000368686 DONSONQ9NYP3 566 aa20.66■□□□□ 0.9
CHTOP-201ENST00000368686 NUTM2FA1L443 756 aa20.65■□□□□ 0.9
CHTOP-201ENST00000368686 HSP90B1P14625 803 aaKnown RBP20.65■□□□□ 0.9
CHTOP-201ENST00000368686 BRD2P25440 801 aaKnown RBP20.65■□□□□ 0.9
CHTOP-201ENST00000368686 DNAJC21Q5F1R6 531 aaKnown RBP20.65■□□□□ 0.9
CHTOP-201ENST00000368686 NBPF6Q5VWK0 638 aa20.65■□□□□ 0.9
CHTOP-201ENST00000368686 NUTM2GQ5VZR2 741 aa20.65■□□□□ 0.9
CHTOP-201ENST00000368686 NBPF4Q96M43 638 aa20.65■□□□□ 0.9
CHTOP-201ENST00000368686 PCDHA7Q9UN72 937 aa20.65■□□□□ 0.9
CHTOP-201ENST00000368686 MED23Q9ULK4 1368 aa20.65■□□□□ 0.9
CHTOP-201ENST00000368686 SPATA31D1Q6ZQQ2 1576 aa20.65■□□□□ 0.9
CHTOP-201ENST00000368686 KIF1CO43896 1103 aaKnown RBP20.65■□□□□ 0.9
CHTOP-201ENST00000368686 SLC3A2P08195 630 aaKnown RBP20.65■□□□□ 0.9
CHTOP-201ENST00000368686 BANK1Q8NDB2 785 aa20.65■□□□□ 0.9
CHTOP-201ENST00000368686 CNNM3Q8NE01 707 aa20.65■□□□□ 0.9
CHTOP-201ENST00000368686 ANKZF1Q9H8Y5 726 aa20.65■□□□□ 0.9
CHTOP-201ENST00000368686 MED4Q9NPJ6 270 aa20.65■□□□□ 0.9
CHTOP-201ENST00000368686 TAF6LQ9Y6J9 622 aa20.65■□□□□ 0.9
CHTOP-201ENST00000368686 TMEM131LA2VDJ0 1609 aa20.65■□□□□ 0.9
CHTOP-201ENST00000368686 MYO1BO43795 1136 aa20.64■□□□□ 0.89
CHTOP-201ENST00000368686 SERPINC1P01008 464 aa20.64■□□□□ 0.89
CHTOP-201ENST00000368686 CEP112Q8N8E3 955 aa20.64■□□□□ 0.89
CHTOP-201ENST00000368686 GBP3Q9H0R5 595 aa20.64■□□□□ 0.89
CHTOP-201ENST00000368686 N4BP1O75113 896 aaKnown RBP20.64■□□□□ 0.89
CHTOP-201ENST00000368686 MYCNP04198 464 aaPredicted RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms