RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 LRRC37AA6NMS7 1700 aa14.98□□□□□ -0.01
TUBE1-202ENST00000368662 ARID4AP29374 1257 aaPredicted RBP14.98□□□□□ -0.01
TUBE1-202ENST00000368662 PTGER2P43116 358 aa14.98□□□□□ -0.01
TUBE1-202ENST00000368662 PRPF40BQ6NWY9 871 aaKnown RBP14.98□□□□□ -0.01
TUBE1-202ENST00000368662 TICAM2Q86XR7 235 aa14.98□□□□□ -0.01
TUBE1-202ENST00000368662 GNL3LQ9NVN8 582 aaKnown RBP14.98□□□□□ -0.01
TUBE1-202ENST00000368662 GGA1Q9UJY5 639 aa14.98□□□□□ -0.01
TUBE1-202ENST00000368662 GPSM2P81274 684 aa14.97□□□□□ -0.01
TUBE1-202ENST00000368662 CC2D2BQ6DHV5 1058 aa14.97□□□□□ -0.01
TUBE1-202ENST00000368662 DLEC1Q9Y238 1755 aa14.97□□□□□ -0.01
TUBE1-202ENST00000368662 SNAP23O00161 211 aa14.96□□□□□ -0.01
TUBE1-202ENST00000368662 GRIPAP1Q4V328 841 aa14.96□□□□□ -0.01
TUBE1-202ENST00000368662 C15orf52Q6ZUT6 534 aaKnown RBP14.96□□□□□ -0.01
TUBE1-202ENST00000368662 VPS37DQ86XT2 251 aa14.96□□□□□ -0.01
TUBE1-202ENST00000368662 TTLL6Q8N841 843 aa14.96□□□□□ -0.01
TUBE1-202ENST00000368662 ZBTB22O15209 634 aa14.96□□□□□ -0.01
TUBE1-202ENST00000368662 MPNDQ8N594 471 aa14.96□□□□□ -0.01
TUBE1-202ENST00000368662 DNAJC2Q99543 621 aaKnown RBP14.96□□□□□ -0.01
TUBE1-202ENST00000368662 UFL1O94874 794 aa14.95□□□□□ -0.02
TUBE1-202ENST00000368662 MAP4K4O95819 1239 aaPredicted RBP14.95□□□□□ -0.02
TUBE1-202ENST00000368662 DPEP1P16444 411 aa14.95□□□□□ -0.02
TUBE1-202ENST00000368662 PHKA1P46020 1223 aa14.95□□□□□ -0.02
TUBE1-202ENST00000368662 PAG1Q9NWQ8 432 aa14.95□□□□□ -0.02
TUBE1-202ENST00000368662 A0A0G2JLW4 131 aa14.95□□□□□ -0.02
TUBE1-202ENST00000368662 HIP1O00291 1037 aa14.95□□□□□ -0.02
TUBE1-202ENST00000368662 SEMA3EO15041 775 aa14.95□□□□□ -0.02
TUBE1-202ENST00000368662 BCAMP50895 628 aa14.95□□□□□ -0.02
TUBE1-202ENST00000368662 DPP8Q6V1X1 898 aaPredicted RBP14.95□□□□□ -0.02
TUBE1-202ENST00000368662 TBC1D16Q8TBP0 767 aa14.95□□□□□ -0.02
TUBE1-202ENST00000368662 FAM84BQ96KN1 310 aaPredicted RBP14.95□□□□□ -0.02
TUBE1-202ENST00000368662 PIM2Q9P1W9 311 aa14.95□□□□□ -0.02
TUBE1-202ENST00000368662 KCNA3P22001 575 aa14.94□□□□□ -0.02
TUBE1-202ENST00000368662 HIBADHP31937 336 aaKnown RBP14.94□□□□□ -0.02
TUBE1-202ENST00000368662 TTF1Q15361 905 aaPredicted RBP14.94□□□□□ -0.02
TUBE1-202ENST00000368662 LRRFIP1Q32MZ4 808 aaKnown RBP14.94□□□□□ -0.02
TUBE1-202ENST00000368662 TBC1D9Q6ZT07 1266 aa14.94□□□□□ -0.02
TUBE1-202ENST00000368662 FBXO33Q7Z6M2 555 aa14.94□□□□□ -0.02
TUBE1-202ENST00000368662 RFX7Q2KHR2 1363 aa14.94□□□□□ -0.02
TUBE1-202ENST00000368662 MCAMP43121 646 aa14.93□□□□□ -0.02
TUBE1-202ENST00000368662 GYG1P46976 350 aa14.93□□□□□ -0.02
TUBE1-202ENST00000368662 FKBP4Q02790 459 aaKnown RBP eCLIP14.93□□□□□ -0.02
TUBE1-202ENST00000368662 SOGA3Q5TF21 947 aa14.93□□□□□ -0.02
TUBE1-202ENST00000368662 ZNF804AQ7Z570 1209 aa14.93□□□□□ -0.02
TUBE1-202ENST00000368662 PPP1R1BQ9UD71 204 aaPredicted RBP14.93□□□□□ -0.02
TUBE1-202ENST00000368662 MED23Q9ULK4 1368 aa14.93□□□□□ -0.02
TUBE1-202ENST00000368662 IRS2Q9Y4H2 1338 aa14.93□□□□□ -0.02
TUBE1-202ENST00000368662 C6orf229H3BNL8 230 aa14.93□□□□□ -0.02
TUBE1-202ENST00000368662 C7orf43Q8WVR3 580 aa14.93□□□□□ -0.02
TUBE1-202ENST00000368662 FSD1Q9BTV5 496 aa14.93□□□□□ -0.02
TUBE1-202ENST00000368662 LTBP1Q14766 1721 aa14.93□□□□□ -0.02
TUBE1-202ENST00000368662 AK9Q5TCS8 1911 aa14.93□□□□□ -0.02
TUBE1-202ENST00000368662 SLX4Q8IY92 1834 aa14.92□□□□□ -0.02
TUBE1-202ENST00000368662 GOLIM4O00461 696 aa14.92□□□□□ -0.02
TUBE1-202ENST00000368662 RASGRF1Q13972 1273 aa14.92□□□□□ -0.02
TUBE1-202ENST00000368662 KBTBD3Q8NAB2 608 aa14.92□□□□□ -0.02
TUBE1-202ENST00000368662 SPATA5Q8NB90 893 aa14.92□□□□□ -0.02
TUBE1-202ENST00000368662 EYA3Q99504 573 aa14.92□□□□□ -0.02
TUBE1-202ENST00000368662 POLLQ9UGP5 575 aa14.92□□□□□ -0.02
TUBE1-202ENST00000368662 DENND2AQ9ULE3 1009 aa14.92□□□□□ -0.02
TUBE1-202ENST00000368662 PDS5AQ29RF7 1337 aaKnown RBP14.92□□□□□ -0.02
TUBE1-202ENST00000368662 CACNA1SQ13698 1873 aa14.92□□□□□ -0.02
TUBE1-202ENST00000368662 WTIPA6NIX2 430 aaPredicted RBP14.92□□□□□ -0.02
TUBE1-202ENST00000368662 CHMLP26374 656 aa14.92□□□□□ -0.02
TUBE1-202ENST00000368662 SCARF1Q14162 830 aa14.92□□□□□ -0.02
TUBE1-202ENST00000368662 HMG20BQ9P0W2 317 aa14.92□□□□□ -0.02
TUBE1-202ENST00000368662 FRAT2O75474 233 aaPredicted RBP14.91□□□□□ -0.02
TUBE1-202ENST00000368662 KLRK1P26718 216 aa14.91□□□□□ -0.02
TUBE1-202ENST00000368662 ZAP70P43403 619 aa14.91□□□□□ -0.02
TUBE1-202ENST00000368662 RTKN2Q8IZC4 609 aa14.91□□□□□ -0.02
TUBE1-202ENST00000368662 KLHL34Q8N239 644 aa14.91□□□□□ -0.02
TUBE1-202ENST00000368662 UPF2Q9HAU5 1272 aaKnown RBP14.91□□□□□ -0.02
TUBE1-202ENST00000368662 DIAPH3Q9NSV4 1193 aa14.91□□□□□ -0.02
TUBE1-202ENST00000368662 KIAA1551Q9HCM1 1747 aa14.91□□□□□ -0.02
TUBE1-202ENST00000368662 CCDC93Q567U6 631 aa14.9□□□□□ -0.02
TUBE1-202ENST00000368662 DALRD3Q5D0E6 543 aaKnown RBP14.9□□□□□ -0.02
TUBE1-202ENST00000368662 SLC51AQ86UW1 340 aa14.9□□□□□ -0.02
TUBE1-202ENST00000368662 SUPT20HQ8NEM7 779 aa14.9□□□□□ -0.02
TUBE1-202ENST00000368662 RUFY2Q8WXA3 655 aa14.9□□□□□ -0.02
TUBE1-202ENST00000368662 RTFDC1Q9BY42 306 aaPredicted RBP14.9□□□□□ -0.02
TUBE1-202ENST00000368662 ZC3H12CQ9C0D7 883 aaKnown RBP14.9□□□□□ -0.02
TUBE1-202ENST00000368662 SNRKQ9NRH2 765 aa14.9□□□□□ -0.02
TUBE1-202ENST00000368662 NDUFB9Q9Y6M9 179 aa14.9□□□□□ -0.02
TUBE1-202ENST00000368662 AKAP11Q9UKA4 1901 aa14.9□□□□□ -0.02
TUBE1-202ENST00000368662 TXNRD3Q86VQ6 643 aa14.9□□□□□ -0.02
TUBE1-202ENST00000368662 EDC3Q96F86 508 aaKnown RBP14.9□□□□□ -0.02
TUBE1-202ENST00000368662 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.9□□□□□ -0.02
TUBE1-202ENST00000368662 C21orf2O43822 256 aa14.89□□□□□ -0.03
TUBE1-202ENST00000368662 CYP2E1P05181 493 aaPredicted RBP14.89□□□□□ -0.03
TUBE1-202ENST00000368662 WASHC4Q2M389 1173 aa14.89□□□□□ -0.03
TUBE1-202ENST00000368662 ZSCAN25Q6NSZ9 544 aa14.89□□□□□ -0.03
TUBE1-202ENST00000368662 OLFM4Q6UX06 510 aa14.89□□□□□ -0.03
TUBE1-202ENST00000368662 PI16Q6UXB8 463 aa14.89□□□□□ -0.03
TUBE1-202ENST00000368662 DUOX1Q9NRD9 1551 aa14.89□□□□□ -0.03
TUBE1-202ENST00000368662 SNED1Q8TER0 1413 aa14.89□□□□□ -0.03
TUBE1-202ENST00000368662 ZFYP08048 801 aaPredicted RBP14.89□□□□□ -0.03
TUBE1-202ENST00000368662 ZNF219Q9P2Y4 722 aaPredicted RBP14.89□□□□□ -0.03
TUBE1-202ENST00000368662 IGSF3O75054 1194 aa14.88□□□□□ -0.03
TUBE1-202ENST00000368662 REC8O95072 547 aa14.88□□□□□ -0.03
TUBE1-202ENST00000368662 IL1R1P14778 569 aa14.88□□□□□ -0.03
TUBE1-202ENST00000368662 TDRD7Q8NHU6 1098 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms