RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 MROH5Q6ZUA9 1318 aa28.04■■■□□ 2.08
ECHDC1-203ENST00000368291 VGLL2Q8N8G2 317 aa28.03■■■□□ 2.08
ECHDC1-203ENST00000368291 ZBTB12Q9Y330 459 aaPredicted RBP28.03■■■□□ 2.08
ECHDC1-203ENST00000368291 ATG9AQ7Z3C6 839 aa28.02■■■□□ 2.08
ECHDC1-203ENST00000368291 COA1Q9GZY4 146 aa28.02■■■□□ 2.08
ECHDC1-203ENST00000368291 EYA2O00167 538 aa28.01■■■□□ 2.07
ECHDC1-203ENST00000368291 VIL1P09327 827 aaKnown RBP28.01■■■□□ 2.07
ECHDC1-203ENST00000368291 PA2G4Q9UQ80 394 aaKnown RBP28.01■■■□□ 2.07
ECHDC1-203ENST00000368291 LMOD1P29536 600 aaPredicted RBP28■■■□□ 2.07
ECHDC1-203ENST00000368291 UBE4AQ14139 1066 aa28■■■□□ 2.07
ECHDC1-203ENST00000368291 SHTN1A0MZ66 631 aa27.99■■■□□ 2.07
ECHDC1-203ENST00000368291 METTL24Q5JXM2 366 aa27.99■■■□□ 2.07
ECHDC1-203ENST00000368291 SMC1BQ8NDV3 1235 aa27.99■■■□□ 2.07
ECHDC1-203ENST00000368291 COPRSQ9NQ92 184 aa27.99■■■□□ 2.07
ECHDC1-203ENST00000368291 SRGAP3O43295 1099 aa27.99■■■□□ 2.07
ECHDC1-203ENST00000368291 PDE8BO95263 885 aa27.99■■■□□ 2.07
ECHDC1-203ENST00000368291 MS4A1P11836 297 aa27.99■■■□□ 2.07
ECHDC1-203ENST00000368291 FSTL1Q12841 308 aa27.99■■■□□ 2.07
ECHDC1-203ENST00000368291 DPF2Q92785 391 aa27.99■■■□□ 2.07
ECHDC1-203ENST00000368291 SIL1Q9H173 461 aa27.99■■■□□ 2.07
ECHDC1-203ENST00000368291 CD209Q9NNX6 404 aa27.99■■■□□ 2.07
ECHDC1-203ENST00000368291 FBXO3Q9UK99 471 aa27.99■■■□□ 2.07
ECHDC1-203ENST00000368291 ZNF609O15014 1411 aa27.98■■■□□ 2.07
ECHDC1-203ENST00000368291 PNMA6EA0A0J9YXQ4 647 aa27.98■■■□□ 2.07
ECHDC1-203ENST00000368291 USP17L3A6NCW0 530 aa27.97■■■□□ 2.07
ECHDC1-203ENST00000368291 USP17L4A6NCW7 530 aa27.97■■■□□ 2.07
ECHDC1-203ENST00000368291 CIAO1O76071 339 aa27.97■■■□□ 2.07
ECHDC1-203ENST00000368291 EAPPQ56P03 285 aaPredicted RBP27.97■■■□□ 2.07
ECHDC1-203ENST00000368291 USP17L1Q7RTZ2 530 aa27.97■■■□□ 2.07
ECHDC1-203ENST00000368291 PNMA8AQ86V59 439 aaPredicted RBP27.97■■■□□ 2.07
ECHDC1-203ENST00000368291 C1orf115Q9H7X2 142 aa27.97■■■□□ 2.07
ECHDC1-203ENST00000368291 CNOT7Q9UIV1 285 aaKnown RBP27.97■■■□□ 2.07
ECHDC1-203ENST00000368291 RPS12P25398 132 aaKnown RBP27.96■■■□□ 2.07
ECHDC1-203ENST00000368291 C20orf194Q5TEA3 1177 aa27.96■■■□□ 2.07
ECHDC1-203ENST00000368291 RSBN1LQ6PCB5 846 aaPredicted RBP27.96■■■□□ 2.07
ECHDC1-203ENST00000368291 LDHDQ86WU2 507 aa27.96■■■□□ 2.07
ECHDC1-203ENST00000368291 GMLQ99445 158 aa27.96■■■□□ 2.07
ECHDC1-203ENST00000368291 ADARB2Q9NS39 739 aaKnown RBP27.96■■■□□ 2.07
ECHDC1-203ENST00000368291 FGFR2P21802 821 aa27.95■■■□□ 2.06
ECHDC1-203ENST00000368291 MVPQ14764 893 aaKnown RBP27.95■■■□□ 2.06
ECHDC1-203ENST00000368291 DACT2Q5SW24 774 aa27.95■■■□□ 2.06
ECHDC1-203ENST00000368291 CHADLQ6NUI6 762 aa27.95■■■□□ 2.06
ECHDC1-203ENST00000368291 MICALL2Q8IY33 904 aa27.95■■■□□ 2.06
ECHDC1-203ENST00000368291 COG6Q9Y2V7 657 aa27.95■■■□□ 2.06
ECHDC1-203ENST00000368291 IL1R1P14778 569 aa27.94■■■□□ 2.06
ECHDC1-203ENST00000368291 USP50Q70EL3 339 aaPredicted RBP27.94■■■□□ 2.06
ECHDC1-203ENST00000368291 FAM84BQ96KN1 310 aaPredicted RBP27.94■■■□□ 2.06
ECHDC1-203ENST00000368291 GYG1P46976 350 aa27.93■■■□□ 2.06
ECHDC1-203ENST00000368291 STRIP1Q5VSL9 837 aa27.93■■■□□ 2.06
ECHDC1-203ENST00000368291 ZNF804AQ7Z570 1209 aa27.93■■■□□ 2.06
ECHDC1-203ENST00000368291 MXD3Q9BW11 206 aa27.93■■■□□ 2.06
ECHDC1-203ENST00000368291 POLR2AP24928 1970 aaKnown RBP27.93■■■□□ 2.06
ECHDC1-203ENST00000368291 HIRAP54198 1017 aaPredicted RBP27.92■■■□□ 2.06
ECHDC1-203ENST00000368291 ATP8B2P98198 1209 aa27.92■■■□□ 2.06
ECHDC1-203ENST00000368291 POLA2Q14181 598 aa27.92■■■□□ 2.06
ECHDC1-203ENST00000368291 AGBL3Q8NEM8 1001 aa27.92■■■□□ 2.06
ECHDC1-203ENST00000368291 TRPM4Q8TD43 1214 aa27.92■■■□□ 2.06
ECHDC1-203ENST00000368291 HSPA6P17066 643 aa27.91■■■□□ 2.06
ECHDC1-203ENST00000368291 IL15P40933 162 aaPredicted RBP27.91■■■□□ 2.06
ECHDC1-203ENST00000368291 GTF2IP78347 998 aa27.91■■■□□ 2.06
ECHDC1-203ENST00000368291 PDE3AQ14432 1141 aa27.91■■■□□ 2.06
ECHDC1-203ENST00000368291 TTLL5Q6EMB2 1281 aa27.91■■■□□ 2.06
ECHDC1-203ENST00000368291 PUM3Q15397 648 aaKnown RBP27.9■■■□□ 2.06
ECHDC1-203ENST00000368291 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.9■■■□□ 2.06
ECHDC1-203ENST00000368291 SSH3Q8TE77 659 aa27.9■■■□□ 2.06
ECHDC1-203ENST00000368291 ARAP2Q8WZ64 1704 aa27.9■■■□□ 2.06
ECHDC1-203ENST00000368291 MYH13Q9UKX3 1938 aa27.9■■■□□ 2.06
ECHDC1-203ENST00000368291 CLEC11AQ9Y240 323 aa27.9■■■□□ 2.06
ECHDC1-203ENST00000368291 H7C1D1 291 aa27.89■■■□□ 2.06
ECHDC1-203ENST00000368291 EGFRP00533 1210 aa27.89■■■□□ 2.06
ECHDC1-203ENST00000368291 HIBADHP31937 336 aaKnown RBP27.89■■■□□ 2.06
ECHDC1-203ENST00000368291 SAMD7Q7Z3H4 446 aa27.89■■■□□ 2.06
ECHDC1-203ENST00000368291 FBXO33Q7Z6M2 555 aa27.89■■■□□ 2.06
ECHDC1-203ENST00000368291 TDRD7Q8NHU6 1098 aaKnown RBP27.89■■■□□ 2.06
ECHDC1-203ENST00000368291 CEP126Q9P2H0 1117 aa27.89■■■□□ 2.06
ECHDC1-203ENST00000368291 DDX19BQ9UMR2 479 aa27.89■■■□□ 2.06
ECHDC1-203ENST00000368291 FBXW7Q969H0 707 aa27.88■■■□□ 2.05
ECHDC1-203ENST00000368291 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.88■■■□□ 2.05
ECHDC1-203ENST00000368291 ZNF280AP59817 542 aaPredicted RBP27.87■■■□□ 2.05
ECHDC1-203ENST00000368291 ZBTB40Q9NUA8 1239 aa27.87■■■□□ 2.05
ECHDC1-203ENST00000368291 ITGBL1O95965 494 aaPredicted RBP27.86■■■□□ 2.05
ECHDC1-203ENST00000368291 MAP1SQ66K74 1059 aaPredicted RBP27.86■■■□□ 2.05
ECHDC1-203ENST00000368291 CEP85Q6P2H3 762 aa27.86■■■□□ 2.05
ECHDC1-203ENST00000368291 CERS5Q8N5B7 392 aa27.86■■■□□ 2.05
ECHDC1-203ENST00000368291 LPIN2Q92539 896 aa27.86■■■□□ 2.05
ECHDC1-203ENST00000368291 MYO3BQ8WXR4 1341 aa27.86■■■□□ 2.05
ECHDC1-203ENST00000368291 SASH1O94885 1247 aa27.86■■■□□ 2.05
ECHDC1-203ENST00000368291 IFIT1P09914 478 aaKnown RBP27.86■■■□□ 2.05
ECHDC1-203ENST00000368291 TBC1D10BQ4KMP7 808 aaPredicted RBP27.86■■■□□ 2.05
ECHDC1-203ENST00000368291 PGAP2Q9UHJ9 254 aa27.86■■■□□ 2.05
ECHDC1-203ENST00000368291 USP17L8P0C7I0 530 aa27.85■■■□□ 2.05
ECHDC1-203ENST00000368291 SLC5A1P13866 664 aa27.85■■■□□ 2.05
ECHDC1-203ENST00000368291 BCAMP50895 628 aa27.85■■■□□ 2.05
ECHDC1-203ENST00000368291 ATP2B3Q16720 1220 aa27.85■■■□□ 2.05
ECHDC1-203ENST00000368291 FAM205AQ6ZU69 1335 aa27.84■■■□□ 2.05
ECHDC1-203ENST00000368291 PASKQ96RG2 1323 aa27.84■■■□□ 2.05
ECHDC1-203ENST00000368291 TFCP2Q12800 502 aa27.84■■■□□ 2.05
ECHDC1-203ENST00000368291 CAVIN4Q5BKX8 364 aa27.84■■■□□ 2.05
ECHDC1-203ENST00000368291 CNTROBQ8N137 903 aa27.84■■■□□ 2.05
ECHDC1-203ENST00000368291 JAG2Q9Y219 1238 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms