RNA–Protein interactions for RNA: ENST00000367256.9

SYNE1-208, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 10,742 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-208ENST00000367256 GBP1P32455 592 aa8.26□□□□□ -1.09
SYNE1-208ENST00000367256 VAV2P52735 878 aa8.26□□□□□ -1.09
SYNE1-208ENST00000367256 GSTO1P78417 241 aa8.26□□□□□ -1.09
SYNE1-208ENST00000367256 UBXN1Q04323 297 aa8.26□□□□□ -1.09
SYNE1-208ENST00000367256 BAG3O95817 575 aa8.26□□□□□ -1.09
SYNE1-208ENST00000367256 DNAJC21Q5F1R6 531 aaKnown RBP8.26□□□□□ -1.09
SYNE1-208ENST00000367256 PAXIP1Q6ZW49 1069 aaPredicted RBP8.26□□□□□ -1.09
SYNE1-208ENST00000367256 RAB11FIP4Q86YS3 637 aa8.26□□□□□ -1.09
SYNE1-208ENST00000367256 OSCARQ8IYS5 282 aa8.26□□□□□ -1.09
SYNE1-208ENST00000367256 CEP120Q8N960 986 aa8.26□□□□□ -1.09
SYNE1-208ENST00000367256 CEP85LQ5SZL2 805 aa8.26□□□□□ -1.09
SYNE1-208ENST00000367256 CROCCP2Q86T23 111 aa8.26□□□□□ -1.09
SYNE1-208ENST00000367256 POGZQ7Z3K3 1410 aa8.26□□□□□ -1.09
SYNE1-208ENST00000367256 MSANTD4Q8NCY6 345 aa8.26□□□□□ -1.09
SYNE1-208ENST00000367256 ORC3Q9UBD5 711 aaPredicted RBP8.26□□□□□ -1.09
SYNE1-208ENST00000367256 ANKRD36BQ8N2N9 1353 aa8.26□□□□□ -1.09
SYNE1-208ENST00000367256 FYB2Q5VWT5 728 aa8.26□□□□□ -1.09
SYNE1-208ENST00000367256 TRMT112Q9UI30 125 aaKnown RBP8.26□□□□□ -1.09
SYNE1-208ENST00000367256 TAF7Q15545 349 aaPredicted RBP8.26□□□□□ -1.09
SYNE1-208ENST00000367256 KCNH5Q8NCM2 988 aa8.26□□□□□ -1.09
SYNE1-208ENST00000367256 IFT81Q8WYA0 676 aa8.26□□□□□ -1.09
SYNE1-208ENST00000367256 TXNDC16Q9P2K2 825 aa8.26□□□□□ -1.09
SYNE1-208ENST00000367256 TSPY2A6NKD2 308 aa8.25□□□□□ -1.09
SYNE1-208ENST00000367256 ATP5DP30049 168 aa8.25□□□□□ -1.09
SYNE1-208ENST00000367256 HEATR3Q7Z4Q2 680 aa8.25□□□□□ -1.09
SYNE1-208ENST00000367256 CNGA4Q8IV77 575 aa8.25□□□□□ -1.09
SYNE1-208ENST00000367256 AOPEPQ8N6M6 819 aa8.25□□□□□ -1.09
SYNE1-208ENST00000367256 IFT140Q96RY7 1462 aa8.25□□□□□ -1.09
SYNE1-208ENST00000367256 SNAPC4Q5SXM2 1469 aa8.25□□□□□ -1.09
SYNE1-208ENST00000367256 HAND2P61296 217 aa8.25□□□□□ -1.09
SYNE1-208ENST00000367256 TYRO3Q06418 890 aa8.25□□□□□ -1.09
SYNE1-208ENST00000367256 HSP90AA4PQ58FG1 418 aa8.25□□□□□ -1.09
SYNE1-208ENST00000367256 GIMAP6Q6P9H5 292 aa8.25□□□□□ -1.09
SYNE1-208ENST00000367256 THUMPD2Q9BTF0 503 aaKnown RBP8.25□□□□□ -1.09
SYNE1-208ENST00000367256 MTRF1LQ9UGC7 380 aaKnown RBP8.25□□□□□ -1.09
SYNE1-208ENST00000367256 CCDC25Q86WR0 208 aa8.25□□□□□ -1.09
SYNE1-208ENST00000367256 TMTC2Q8N394 836 aa8.25□□□□□ -1.09
SYNE1-208ENST00000367256 UBLCP1Q8WVY7 318 aaPredicted RBP8.25□□□□□ -1.09
SYNE1-208ENST00000367256 BICDL2A1A5D9 508 aa8.25□□□□□ -1.09
SYNE1-208ENST00000367256 KRT23Q9C075 422 aa8.25□□□□□ -1.09
SYNE1-208ENST00000367256 INTS8Q75QN2 995 aaKnown RBP8.25□□□□□ -1.09
SYNE1-208ENST00000367256 CRNKL1Q9BZJ0 848 aaKnown RBP8.25□□□□□ -1.09
SYNE1-208ENST00000367256 VAT1LQ9HCJ6 419 aa8.25□□□□□ -1.09
SYNE1-208ENST00000367256 ATP6V0A2Q9Y487 856 aa8.25□□□□□ -1.09
SYNE1-208ENST00000367256 RTL9Q8NET4 1388 aa8.25□□□□□ -1.09
SYNE1-208ENST00000367256 MAK16Q9BXY0 300 aaKnown RBP8.25□□□□□ -1.09
SYNE1-208ENST00000367256 VCX3BQ9H321 246 aa8.25□□□□□ -1.09
SYNE1-208ENST00000367256 ZMYM3Q14202 1370 aa8.25□□□□□ -1.09
SYNE1-208ENST00000367256 BUB1BO60566 1050 aaPredicted RBP8.25□□□□□ -1.09
SYNE1-208ENST00000367256 CCDC8Q9H0W5 538 aaPredicted RBP8.25□□□□□ -1.09
SYNE1-208ENST00000367256 KCNK9Q9NPC2 374 aa8.25□□□□□ -1.09
SYNE1-208ENST00000367256 CASQ2O14958 399 aaPredicted RBP8.25□□□□□ -1.09
SYNE1-208ENST00000367256 ARHGAP25P42331 645 aa8.25□□□□□ -1.09
SYNE1-208ENST00000367256 SEL1L2Q5TEA6 688 aa8.25□□□□□ -1.09
SYNE1-208ENST00000367256 SEPT14Q6ZU15 432 aa8.25□□□□□ -1.09
SYNE1-208ENST00000367256 ZNF830Q96NB3 372 aaPredicted RBP8.25□□□□□ -1.09
SYNE1-208ENST00000367256 PFDN4Q9NQP4 134 aa8.25□□□□□ -1.09
SYNE1-208ENST00000367256 TFIP11Q9UBB9 837 aaKnown RBP8.25□□□□□ -1.09
SYNE1-208ENST00000367256 PSMA7O14818 248 aa8.24□□□□□ -1.09
SYNE1-208ENST00000367256 TSPY3P0CV98 308 aa8.24□□□□□ -1.09
SYNE1-208ENST00000367256 TSPY8P0CW00 308 aa8.24□□□□□ -1.09
SYNE1-208ENST00000367256 THEMISQ8N1K5 641 aaPredicted RBP8.24□□□□□ -1.09
SYNE1-208ENST00000367256 TMX3Q96JJ7 454 aa8.24□□□□□ -1.09
SYNE1-208ENST00000367256 GUCA1BQ9UMX6 200 aa8.24□□□□□ -1.09
SYNE1-208ENST00000367256 CCDC61Q9Y6R9 512 aa8.24□□□□□ -1.09
SYNE1-208ENST00000367256 PPFIA3O75145 1194 aa8.24□□□□□ -1.09
SYNE1-208ENST00000367256 GAS8O95995 478 aa8.24□□□□□ -1.09
SYNE1-208ENST00000367256 NBPF7P0C2Y1 421 aaPredicted RBP8.24□□□□□ -1.09
SYNE1-208ENST00000367256 TRIM14Q14142 442 aa8.24□□□□□ -1.09
SYNE1-208ENST00000367256 WTAPQ15007 396 aa8.24□□□□□ -1.09
SYNE1-208ENST00000367256 RBM28Q9NW13 759 aaKnown RBP8.24□□□□□ -1.09
SYNE1-208ENST00000367256 NKIRAS1Q9NYS0 192 aa8.24□□□□□ -1.09
SYNE1-208ENST00000367256 DBF4Q9UBU7 674 aaPredicted RBP8.24□□□□□ -1.09
SYNE1-208ENST00000367256 PTCD1O75127 700 aaKnown RBP8.24□□□□□ -1.09
SYNE1-208ENST00000367256 FAM13AO94988 1023 aa8.24□□□□□ -1.09
SYNE1-208ENST00000367256 C20orf194Q5TEA3 1177 aa8.24□□□□□ -1.09
SYNE1-208ENST00000367256 BRAPQ7Z569 592 aa8.24□□□□□ -1.09
SYNE1-208ENST00000367256 TNNC1P63316 161 aa8.24□□□□□ -1.09
SYNE1-208ENST00000367256 PLCB3Q01970 1234 aa8.24□□□□□ -1.09
SYNE1-208ENST00000367256 TRAF1Q13077 416 aa8.24□□□□□ -1.09
SYNE1-208ENST00000367256 DPH6Q7L8W6 267 aa8.24□□□□□ -1.09
SYNE1-208ENST00000367256 NEK11Q8NG66 645 aa8.24□□□□□ -1.09
SYNE1-208ENST00000367256 NESP48681 1621 aa8.24□□□□□ -1.09
SYNE1-208ENST00000367256 RHOXF2BP0C7M4 288 aa8.24□□□□□ -1.09
SYNE1-208ENST00000367256 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.24□□□□□ -1.09
SYNE1-208ENST00000367256 RHOXF2Q9BQY4 288 aa8.24□□□□□ -1.09
SYNE1-208ENST00000367256 CLUL1Q15846 466 aa8.24□□□□□ -1.09
SYNE1-208ENST00000367256 PLCD3Q8N3E9 789 aa8.24□□□□□ -1.09
SYNE1-208ENST00000367256 CNNM2Q9H8M5 875 aa8.24□□□□□ -1.09
SYNE1-208ENST00000367256 PRG4Q92954 1404 aaPredicted RBP8.24□□□□□ -1.09
SYNE1-208ENST00000367256 F13A1P00488 732 aa8.23□□□□□ -1.09
SYNE1-208ENST00000367256 IFIT1BQ5T764 474 aaKnown RBP8.23□□□□□ -1.09
SYNE1-208ENST00000367256 CCDC186Q7Z3E2 898 aa8.23□□□□□ -1.09
SYNE1-208ENST00000367256 CACNA2D3Q8IZS8 1091 aa8.23□□□□□ -1.09
SYNE1-208ENST00000367256 USH1CQ9Y6N9 552 aa8.23□□□□□ -1.09
SYNE1-208ENST00000367256 KIF21AQ7Z4S6 1674 aa8.23□□□□□ -1.09
SYNE1-208ENST00000367256 ARHGEF12Q9NZN5 1544 aa8.23□□□□□ -1.09
SYNE1-208ENST00000367256 TSNAXIP1Q2TAA8 658 aa8.23□□□□□ -1.09
SYNE1-208ENST00000367256 TSHZ3Q63HK5 1081 aa8.23□□□□□ -1.09
SYNE1-208ENST00000367256 MAP3K2Q9Y2U5 619 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms