RNA–Protein interactions for RNA: ENST00000366206.2

STRN3-203, Transcript of striatin 3, humanhuman

TSL 4

Gene STRN3, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-203ENST00000366206 C2CD5Q86YS7 1000 aa13.66□□□□□ -0.22
STRN3-203ENST00000366206 SP8Q8IXZ3 490 aa13.66□□□□□ -0.22
STRN3-203ENST00000366206 EAF2Q96CJ1 260 aaPredicted RBP13.66□□□□□ -0.22
STRN3-203ENST00000366206 PUS3Q9BZE2 481 aaKnown RBP13.66□□□□□ -0.22
STRN3-203ENST00000366206 IL1RAPL2Q9NP60 686 aa13.66□□□□□ -0.22
STRN3-203ENST00000366206 MINPP1Q9UNW1 487 aa13.66□□□□□ -0.22
STRN3-203ENST00000366206 ATP6V0A2Q9Y487 856 aa13.66□□□□□ -0.22
STRN3-203ENST00000366206 LTBP1Q14766 1721 aa13.66□□□□□ -0.22
STRN3-203ENST00000366206 KIAA1551Q9HCM1 1747 aa13.65□□□□□ -0.22
STRN3-203ENST00000366206 A0A1B0GUL7 405 aa13.65□□□□□ -0.22
STRN3-203ENST00000366206 APBB1O00213 710 aa13.65□□□□□ -0.22
STRN3-203ENST00000366206 PPEF1O14829 653 aaPredicted RBP13.65□□□□□ -0.22
STRN3-203ENST00000366206 SMARCA5O60264 1052 aaPredicted RBP13.65□□□□□ -0.22
STRN3-203ENST00000366206 FXR2P51116 673 aaKnown RBP eCLIP13.65□□□□□ -0.22
STRN3-203ENST00000366206 ATP5JP18859 108 aa13.64□□□□□ -0.23
STRN3-203ENST00000366206 TTC22Q5TAA0 569 aa13.64□□□□□ -0.23
STRN3-203ENST00000366206 CCDC24Q8N4L8 307 aa13.64□□□□□ -0.23
STRN3-203ENST00000366206 PDS5AQ29RF7 1337 aaKnown RBP13.64□□□□□ -0.23
STRN3-203ENST00000366206 COL4A1P02462 1669 aa13.63□□□□□ -0.23
STRN3-203ENST00000366206 DUOX1Q9NRD9 1551 aa13.63□□□□□ -0.23
STRN3-203ENST00000366206 RFX7Q2KHR2 1363 aa13.63□□□□□ -0.23
STRN3-203ENST00000366206 SOCS7O14512 581 aa13.63□□□□□ -0.23
STRN3-203ENST00000366206 PRKAR2AP13861 404 aaKnown RBP13.63□□□□□ -0.23
STRN3-203ENST00000366206 ATP2B4P23634 1241 aa13.63□□□□□ -0.23
STRN3-203ENST00000366206 RGS3P49796 1198 aa13.63□□□□□ -0.23
STRN3-203ENST00000366206 CCDC158Q5M9N0 1113 aa13.63□□□□□ -0.23
STRN3-203ENST00000366206 TMED8Q6PL24 325 aaPredicted RBP13.63□□□□□ -0.23
STRN3-203ENST00000366206 DBNLQ9UJU6 430 aaKnown RBP13.63□□□□□ -0.23
STRN3-203ENST00000366206 PSDA5PKW4 1024 aaPredicted RBP13.62□□□□□ -0.23
STRN3-203ENST00000366206 SEMA3EO15041 775 aa13.62□□□□□ -0.23
STRN3-203ENST00000366206 UQCRFS1P1P0C7P4 283 aa13.62□□□□□ -0.23
STRN3-203ENST00000366206 PRPF40BQ6NWY9 871 aaKnown RBP13.62□□□□□ -0.23
STRN3-203ENST00000366206 TTLL6Q8N841 843 aa13.62□□□□□ -0.23
STRN3-203ENST00000366206 PI4K2BQ8TCG2 481 aa13.62□□□□□ -0.23
STRN3-203ENST00000366206 ZNF804BA4D1E1 1349 aa13.62□□□□□ -0.23
STRN3-203ENST00000366206 BRCA1P38398 1863 aaKnown RBP13.61□□□□□ -0.23
STRN3-203ENST00000366206 MED23Q9ULK4 1368 aa13.61□□□□□ -0.23
STRN3-203ENST00000366206 KCNJ4P48050 445 aa13.61□□□□□ -0.23
STRN3-203ENST00000366206 CAVIN4Q5BKX8 364 aa13.61□□□□□ -0.23
STRN3-203ENST00000366206 GORABQ5T7V8 394 aa13.61□□□□□ -0.23
STRN3-203ENST00000366206 XAGE2Q96GT9 111 aa13.61□□□□□ -0.23
STRN3-203ENST00000366206 VPS33BQ9H267 617 aa13.61□□□□□ -0.23
STRN3-203ENST00000366206 GNL3LQ9NVN8 582 aaKnown RBP13.61□□□□□ -0.23
STRN3-203ENST00000366206 ANKIB1Q9P2G1 1089 aa13.61□□□□□ -0.23
STRN3-203ENST00000366206 GGA1Q9UJY5 639 aa13.61□□□□□ -0.23
STRN3-203ENST00000366206 TAF1P21675 1872 aa13.6□□□□□ -0.23
STRN3-203ENST00000366206 ARID4AP29374 1257 aaPredicted RBP13.6□□□□□ -0.23
STRN3-203ENST00000366206 C16orf71Q8IYS4 520 aaPredicted RBP13.6□□□□□ -0.23
STRN3-203ENST00000366206 RTKN2Q8IZC4 609 aa13.6□□□□□ -0.23
STRN3-203ENST00000366206 SUPT20HQ8NEM7 779 aa13.6□□□□□ -0.23
STRN3-203ENST00000366206 SNED1Q8TER0 1413 aa13.6□□□□□ -0.23
STRN3-203ENST00000366206 C7orf43Q8WVR3 580 aa13.6□□□□□ -0.23
STRN3-203ENST00000366206 NEUROD6Q96NK8 337 aa13.6□□□□□ -0.23
STRN3-203ENST00000366206 HAUS7Q99871 368 aa13.6□□□□□ -0.23
STRN3-203ENST00000366206 DBNDD2Q9BQY9 259 aa13.6□□□□□ -0.23
STRN3-203ENST00000366206 RTFDC1Q9BY42 306 aaPredicted RBP13.6□□□□□ -0.23
STRN3-203ENST00000366206 PIM2Q9P1W9 311 aa13.6□□□□□ -0.23
STRN3-203ENST00000366206 FARP1Q9Y4F1 1045 aaPredicted RBP13.6□□□□□ -0.23
STRN3-203ENST00000366206 TIMM10P62072 90 aa13.59□□□□□ -0.23
STRN3-203ENST00000366206 LRRFIP1Q32MZ4 808 aaKnown RBP13.59□□□□□ -0.23
STRN3-203ENST00000366206 CNTROBQ8N137 903 aa13.59□□□□□ -0.23
STRN3-203ENST00000366206 OTUD7AQ8TE49 926 aaPredicted RBP13.59□□□□□ -0.23
STRN3-203ENST00000366206 ZNF622Q969S3 477 aaKnown RBP eCLIP13.59□□□□□ -0.23
STRN3-203ENST00000366206 FAM212AQ96EL1 285 aa13.59□□□□□ -0.23
STRN3-203ENST00000366206 EYA3Q99504 573 aa13.59□□□□□ -0.23
STRN3-203ENST00000366206 CCDC8Q9H0W5 538 aaPredicted RBP13.59□□□□□ -0.23
STRN3-203ENST00000366206 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.59□□□□□ -0.23
STRN3-203ENST00000366206 HIP1O00291 1037 aa13.58□□□□□ -0.24
STRN3-203ENST00000366206 DPEP1P16444 411 aa13.58□□□□□ -0.24
STRN3-203ENST00000366206 KCNA3P22001 575 aa13.58□□□□□ -0.24
STRN3-203ENST00000366206 TTF1Q15361 905 aaPredicted RBP13.58□□□□□ -0.24
STRN3-203ENST00000366206 TTC39AQ5SRH9 613 aa13.58□□□□□ -0.24
STRN3-203ENST00000366206 CASC1Q6TDU7 716 aa13.58□□□□□ -0.24
STRN3-203ENST00000366206 ZNF804AQ7Z570 1209 aa13.58□□□□□ -0.24
STRN3-203ENST00000366206 EVI5LQ96CN4 794 aa13.58□□□□□ -0.24
STRN3-203ENST00000366206 PSMD1Q99460 953 aa13.58□□□□□ -0.24
STRN3-203ENST00000366206 TLR7Q9NYK1 1049 aaKnown RBP13.58□□□□□ -0.24
STRN3-203ENST00000366206 IRS2Q9Y4H2 1338 aa13.58□□□□□ -0.24
STRN3-203ENST00000366206 TAF5LO75529 589 aa13.57□□□□□ -0.24
STRN3-203ENST00000366206 UFL1O94874 794 aa13.57□□□□□ -0.24
STRN3-203ENST00000366206 CHRNA5P30532 468 aa13.57□□□□□ -0.24
STRN3-203ENST00000366206 CCDC93Q567U6 631 aa13.57□□□□□ -0.24
STRN3-203ENST00000366206 DALRD3Q5D0E6 543 aaKnown RBP13.57□□□□□ -0.24
STRN3-203ENST00000366206 CCDC102BQ68D86 513 aa13.57□□□□□ -0.24
STRN3-203ENST00000366206 DPP8Q6V1X1 898 aaPredicted RBP13.57□□□□□ -0.24
STRN3-203ENST00000366206 FBXO33Q7Z6M2 555 aa13.57□□□□□ -0.24
STRN3-203ENST00000366206 MPNDQ8N594 471 aa13.57□□□□□ -0.24
STRN3-203ENST00000366206 TBC1D16Q8TBP0 767 aa13.57□□□□□ -0.24
STRN3-203ENST00000366206 NSFL1CQ9UNZ2 370 aaKnown RBP13.57□□□□□ -0.24
STRN3-203ENST00000366206 SLX4Q8IY92 1834 aa13.57□□□□□ -0.24
STRN3-203ENST00000366206 ARFGEF1Q9Y6D6 1849 aa13.57□□□□□ -0.24
STRN3-203ENST00000366206 GSPT1P15170 499 aaKnown RBP13.56□□□□□ -0.24
STRN3-203ENST00000366206 GPSM2P81274 684 aa13.56□□□□□ -0.24
STRN3-203ENST00000366206 VPS37DQ86XT2 251 aa13.56□□□□□ -0.24
STRN3-203ENST00000366206 RASEFQ8IZ41 740 aa13.56□□□□□ -0.24
STRN3-203ENST00000366206 PIP4P2Q8N4L2 257 aa13.56□□□□□ -0.24
STRN3-203ENST00000366206 HELBQ8NG08 1087 aaPredicted RBP13.56□□□□□ -0.24
STRN3-203ENST00000366206 DENND2AQ9ULE3 1009 aa13.56□□□□□ -0.24
STRN3-203ENST00000366206 CDC45O75419 566 aa13.55□□□□□ -0.24
STRN3-203ENST00000366206 SDSP20132 328 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms