RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 BHLHE41Q9C0J9 482 aaPredicted RBP7.61□□□□□ -1.19
RPL39-201ENST00000361575 ATXN7L1Q9ULK2 861 aaPredicted RBP7.61□□□□□ -1.19
RPL39-201ENST00000361575 XRCC5P13010 732 aaKnown RBP7.6□□□□□ -1.19
RPL39-201ENST00000361575 GARTP22102 1010 aa7.6□□□□□ -1.19
RPL39-201ENST00000361575 NRLP54845 237 aa7.6□□□□□ -1.19
RPL39-201ENST00000361575 RBL2Q08999 1139 aa7.6□□□□□ -1.19
RPL39-201ENST00000361575 FAM182BQ5T319 152 aa7.6□□□□□ -1.19
RPL39-201ENST00000361575 ADAMTSL4Q6UY14 1074 aa7.6□□□□□ -1.19
RPL39-201ENST00000361575 DTHD1Q6ZMT9 781 aa7.6□□□□□ -1.19
RPL39-201ENST00000361575 TMEM74Q96NL1 305 aa7.6□□□□□ -1.19
RPL39-201ENST00000361575 EFCC1Q9HA90 598 aa7.6□□□□□ -1.19
RPL39-201ENST00000361575 AKAP2Q9Y2D5 859 aa7.6□□□□□ -1.19
RPL39-201ENST00000361575 ENC1O14682 589 aa7.59□□□□□ -1.19
RPL39-201ENST00000361575 SMARCA5O60264 1052 aaPredicted RBP7.59□□□□□ -1.19
RPL39-201ENST00000361575 ATP11AP98196 1134 aa7.59□□□□□ -1.19
RPL39-201ENST00000361575 CTBSQ01459 385 aa7.59□□□□□ -1.19
RPL39-201ENST00000361575 MLLT1Q03111 559 aaPredicted RBP7.59□□□□□ -1.19
RPL39-201ENST00000361575 FAAP100Q0VG06 881 aa7.59□□□□□ -1.19
RPL39-201ENST00000361575 GIMAP6Q6P9H5 292 aa7.59□□□□□ -1.19
RPL39-201ENST00000361575 TPTE2Q6XPS3 522 aa7.59□□□□□ -1.19
RPL39-201ENST00000361575 PHC3Q8NDX5 983 aa7.59□□□□□ -1.19
RPL39-201ENST00000361575 TRPM4Q8TD43 1214 aa7.59□□□□□ -1.19
RPL39-201ENST00000361575 NXPE3Q969Y0 559 aa7.59□□□□□ -1.19
RPL39-201ENST00000361575 EAF1Q96JC9 268 aaPredicted RBP7.59□□□□□ -1.19
RPL39-201ENST00000361575 KCNQ5Q9NR82 932 aa7.59□□□□□ -1.19
RPL39-201ENST00000361575 PPP4R2Q9NY27 417 aa7.59□□□□□ -1.19
RPL39-201ENST00000361575 TLR6Q9Y2C9 796 aa7.59□□□□□ -1.19
RPL39-201ENST00000361575 MINDY4BA8MYZ0 360 aa7.58□□□□□ -1.2
RPL39-201ENST00000361575 J3QW42 95 aa7.58□□□□□ -1.2
RPL39-201ENST00000361575 FGFR3P22607 806 aa7.58□□□□□ -1.2
RPL39-201ENST00000361575 GPLD1P80108 840 aa7.58□□□□□ -1.2
RPL39-201ENST00000361575 MAP3K11Q16584 847 aa7.58□□□□□ -1.2
RPL39-201ENST00000361575 SV2BQ7L1I2 683 aa7.58□□□□□ -1.2
RPL39-201ENST00000361575 KIAA0825Q8IV33 1275 aa7.58□□□□□ -1.2
RPL39-201ENST00000361575 TMEM102Q8N9M5 508 aaPredicted RBP7.58□□□□□ -1.2
RPL39-201ENST00000361575 TRIM47Q96LD4 638 aa7.58□□□□□ -1.2
RPL39-201ENST00000361575 SPON2Q9BUD6 331 aa7.58□□□□□ -1.2
RPL39-201ENST00000361575 RASSF4Q9H2L5 321 aa7.58□□□□□ -1.2
RPL39-201ENST00000361575 GPR25O00155 361 aa7.57□□□□□ -1.2
RPL39-201ENST00000361575 C2CD2LO14523 706 aa7.57□□□□□ -1.2
RPL39-201ENST00000361575 PAGE1O75459 146 aa7.57□□□□□ -1.2
RPL39-201ENST00000361575 GBP2P32456 591 aaPredicted RBP7.57□□□□□ -1.2
RPL39-201ENST00000361575 EIF4A3P38919 411 aaKnown RBP7.57□□□□□ -1.2
RPL39-201ENST00000361575 FBXL19Q6PCT2 694 aa7.57□□□□□ -1.2
RPL39-201ENST00000361575 HFE2Q6ZVN8 426 aa7.57□□□□□ -1.2
RPL39-201ENST00000361575 GMCL1Q96IK5 515 aa7.57□□□□□ -1.2
RPL39-201ENST00000361575 SPATA32Q96LK8 384 aa7.57□□□□□ -1.2
RPL39-201ENST00000361575 ZNF576Q9H609 170 aa7.57□□□□□ -1.2
RPL39-201ENST00000361575 A0A096LPE4 126 aa7.56□□□□□ -1.2
RPL39-201ENST00000361575 LOC102724428A0A0B4J2F2 783 aa7.56□□□□□ -1.2
RPL39-201ENST00000361575 A0A1W2PPZ6 126 aa7.56□□□□□ -1.2
RPL39-201ENST00000361575 SNRPBP14678 240 aaKnown RBP7.56□□□□□ -1.2
RPL39-201ENST00000361575 LIG3P49916 1009 aa7.56□□□□□ -1.2
RPL39-201ENST00000361575 SIK1P57059 783 aa7.56□□□□□ -1.2
RPL39-201ENST00000361575 CCDC144BQ3MJ40 725 aa7.56□□□□□ -1.2
RPL39-201ENST00000361575 RASIP1Q5U651 963 aa7.56□□□□□ -1.2
RPL39-201ENST00000361575 RELL1Q8IUW5 271 aa7.56□□□□□ -1.2
RPL39-201ENST00000361575 ZNF296Q8WUU4 475 aaPredicted RBP7.56□□□□□ -1.2
RPL39-201ENST00000361575 NECAB3Q96P71 396 aaPredicted RBP7.56□□□□□ -1.2
RPL39-201ENST00000361575 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.56□□□□□ -1.2
RPL39-201ENST00000361575 PBX4Q9BYU1 374 aa7.56□□□□□ -1.2
RPL39-201ENST00000361575 MUC3BQ9H195 1237 aa7.56□□□□□ -1.2
RPL39-201ENST00000361575 SEC31BQ9NQW1 1179 aa7.56□□□□□ -1.2
RPL39-201ENST00000361575 GMPR2Q9P2T1 348 aaKnown RBP7.56□□□□□ -1.2
RPL39-201ENST00000361575 PDE2AO00408 941 aaPredicted RBP7.55□□□□□ -1.2
RPL39-201ENST00000361575 GREM1O60565 184 aa7.55□□□□□ -1.2
RPL39-201ENST00000361575 TFE3P19532 575 aaPredicted RBP7.55□□□□□ -1.2
RPL39-201ENST00000361575 PWP1Q13610 501 aa7.55□□□□□ -1.2
RPL39-201ENST00000361575 POP1Q99575 1024 aaKnown RBP7.55□□□□□ -1.2
RPL39-201ENST00000361575 PIF1Q9H611 641 aa7.55□□□□□ -1.2
RPL39-201ENST00000361575 DNAJB12Q9NXW2 375 aaKnown RBP7.55□□□□□ -1.2
RPL39-201ENST00000361575 CADPSQ9ULU8 1353 aa7.55□□□□□ -1.2
RPL39-201ENST00000361575 PF4P02776 101 aa7.54□□□□□ -1.2
RPL39-201ENST00000361575 CRKP46108 304 aa7.54□□□□□ -1.2
RPL39-201ENST00000361575 FAM160A1Q05DH4 1040 aa7.54□□□□□ -1.2
RPL39-201ENST00000361575 AGMOQ6ZNB7 445 aa7.54□□□□□ -1.2
RPL39-201ENST00000361575 SYT9Q86SS6 491 aa7.54□□□□□ -1.2
RPL39-201ENST00000361575 VPS37DQ86XT2 251 aa7.54□□□□□ -1.2
RPL39-201ENST00000361575 GINM1Q9NU53 330 aa7.54□□□□□ -1.2
RPL39-201ENST00000361575 KLF15Q9UIH9 416 aa7.54□□□□□ -1.2
RPL39-201ENST00000361575 NAGPAQ9UK23 515 aa7.54□□□□□ -1.2
RPL39-201ENST00000361575 PPFIA3O75145 1194 aa7.53□□□□□ -1.2
RPL39-201ENST00000361575 CAMK2GQ13555 558 aaPredicted RBP7.53□□□□□ -1.2
RPL39-201ENST00000361575 ZNF468Q5VIY5 522 aaPredicted RBP7.53□□□□□ -1.2
RPL39-201ENST00000361575 PMFBP1Q8TBY8 1022 aa7.53□□□□□ -1.2
RPL39-201ENST00000361575 ASAP3Q8TDY4 903 aa7.53□□□□□ -1.2
RPL39-201ENST00000361575 KIFC2Q96AC6 838 aa7.53□□□□□ -1.2
RPL39-201ENST00000361575 SEC16BQ96JE7 1060 aa7.53□□□□□ -1.2
RPL39-201ENST00000361575 MDFIQ99750 246 aa7.53□□□□□ -1.2
RPL39-201ENST00000361575 NT5C1AQ9BXI3 368 aa7.53□□□□□ -1.2
RPL39-201ENST00000361575 SENP2Q9HC62 589 aa7.53□□□□□ -1.2
RPL39-201ENST00000361575 UBP1Q9NZI7 540 aa7.53□□□□□ -1.2
RPL39-201ENST00000361575 EFR3BQ9Y2G0 817 aa7.53□□□□□ -1.2
RPL39-201ENST00000361575 SOX9P48436 509 aa7.52□□□□□ -1.21
RPL39-201ENST00000361575 NASPP49321 788 aaPredicted RBP7.52□□□□□ -1.21
RPL39-201ENST00000361575 LMNB2Q03252 620 aa7.52□□□□□ -1.21
RPL39-201ENST00000361575 RPS26P11Q5JNZ5 115 aaPredicted RBP7.52□□□□□ -1.21
RPL39-201ENST00000361575 TTBK2Q6IQ55 1244 aa7.52□□□□□ -1.21
RPL39-201ENST00000361575 SPACA7Q96KW9 195 aa7.52□□□□□ -1.21
RPL39-201ENST00000361575 CEP44Q9C0F1 390 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms