RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 LEO1Q8WVC0 666 aaPredicted RBP31.13■■■□□ 2.57
CUEDC1-201ENST00000360238 HMGN5P82970 282 aaKnown RBP31.12■■■□□ 2.57
CUEDC1-201ENST00000360238 PDZRN4Q6ZMN7 1036 aaPredicted RBP31.12■■■□□ 2.57
CUEDC1-201ENST00000360238 NSUN7Q8NE18 718 aaKnown RBP31.12■■■□□ 2.57
CUEDC1-201ENST00000360238 OSBP2Q969R2 916 aa31.12■■■□□ 2.57
CUEDC1-201ENST00000360238 KIF3AQ9Y496 699 aa31.12■■■□□ 2.57
CUEDC1-201ENST00000360238 AKAP11Q9UKA4 1901 aa31.12■■■□□ 2.57
CUEDC1-201ENST00000360238 DDX60Q8IY21 1712 aaKnown RBP31.11■■■□□ 2.57
CUEDC1-201ENST00000360238 H3BQV1 296 aa31.11■■■□□ 2.57
CUEDC1-201ENST00000360238 IFFO2Q5TF58 517 aa31.11■■■□□ 2.57
CUEDC1-201ENST00000360238 NLRP10Q86W26 655 aa31.11■■■□□ 2.57
CUEDC1-201ENST00000360238 FBXL16Q8N461 479 aa31.11■■■□□ 2.57
CUEDC1-201ENST00000360238 CHMP4CQ96CF2 233 aa31.11■■■□□ 2.57
CUEDC1-201ENST00000360238 NUP62CLQ9H1M0 184 aa31.1■■■□□ 2.57
CUEDC1-201ENST00000360238 CTNNA3Q9UI47 895 aa31.1■■■□□ 2.57
CUEDC1-201ENST00000360238 CCDC192P0DO97 292 aa31.1■■■□□ 2.57
CUEDC1-201ENST00000360238 NAA16Q6N069 864 aaPredicted RBP31.1■■■□□ 2.57
CUEDC1-201ENST00000360238 USP25Q9UHP3 1055 aa31.1■■■□□ 2.57
CUEDC1-201ENST00000360238 PTMAP06454 111 aaKnown RBP31.09■■■□□ 2.57
CUEDC1-201ENST00000360238 COL22A1Q8NFW1 1626 aaPredicted RBP31.09■■■□□ 2.57
CUEDC1-201ENST00000360238 GOLGA6L4A6NEF3 574 aa31.09■■■□□ 2.57
CUEDC1-201ENST00000360238 CYP19A1P11511 503 aaPredicted RBP31.09■■■□□ 2.57
CUEDC1-201ENST00000360238 APOBRQ0VD83 1088 aa31.09■■■□□ 2.57
CUEDC1-201ENST00000360238 LIG1P18858 919 aa31.08■■■□□ 2.57
CUEDC1-201ENST00000360238 HLFQ16534 295 aa31.08■■■□□ 2.57
CUEDC1-201ENST00000360238 MAP3K11Q16584 847 aa31.08■■■□□ 2.57
CUEDC1-201ENST00000360238 DDX11Q96FC9 970 aa31.08■■■□□ 2.57
CUEDC1-201ENST00000360238 ZNF274Q96GC6 653 aaPredicted RBP31.08■■■□□ 2.57
CUEDC1-201ENST00000360238 CCDC85AQ96PX6 553 aaPredicted RBP31.08■■■□□ 2.57
CUEDC1-201ENST00000360238 DDX19AQ9NUU7 478 aaKnown RBP31.08■■■□□ 2.57
CUEDC1-201ENST00000360238 RIPOR2Q9Y4F9 1068 aa31.08■■■□□ 2.57
CUEDC1-201ENST00000360238 ATP2B3Q16720 1220 aa31.07■■■□□ 2.57
CUEDC1-201ENST00000360238 TTLL11Q8NHH1 800 aa31.07■■■□□ 2.57
CUEDC1-201ENST00000360238 COL16A1Q07092 1604 aaPredicted RBP31.07■■■□□ 2.56
CUEDC1-201ENST00000360238 SALL1Q9NSC2 1324 aa31.07■■■□□ 2.56
CUEDC1-201ENST00000360238 CTSWP56202 376 aa31.07■■■□□ 2.56
CUEDC1-201ENST00000360238 APPBP2Q92624 585 aa31.07■■■□□ 2.56
CUEDC1-201ENST00000360238 TFIP11Q9UBB9 837 aaKnown RBP31.07■■■□□ 2.56
CUEDC1-201ENST00000360238 LRP5O75197 1615 aa31.06■■■□□ 2.56
CUEDC1-201ENST00000360238 A0A0G2JLW4 131 aa31.06■■■□□ 2.56
CUEDC1-201ENST00000360238 PTPDC1A2A3K4 754 aa31.06■■■□□ 2.56
CUEDC1-201ENST00000360238 KDM4AO75164 1064 aa31.06■■■□□ 2.56
CUEDC1-201ENST00000360238 CTDNEP1O95476 244 aa31.06■■■□□ 2.56
CUEDC1-201ENST00000360238 ITGA6P23229 1130 aa31.06■■■□□ 2.56
CUEDC1-201ENST00000360238 SCARF1Q14162 830 aa31.06■■■□□ 2.56
CUEDC1-201ENST00000360238 METTL24Q5JXM2 366 aa31.06■■■□□ 2.56
CUEDC1-201ENST00000360238 CFAP45Q9UL16 551 aa31.06■■■□□ 2.56
CUEDC1-201ENST00000360238 DOT1LQ8TEK3 1739 aa31.05■■■□□ 2.56
CUEDC1-201ENST00000360238 ARAP2Q8WZ64 1704 aa31.05■■■□□ 2.56
CUEDC1-201ENST00000360238 WASHC4Q2M389 1173 aa31.05■■■□□ 2.56
CUEDC1-201ENST00000360238 ZNF512BQ96KM6 892 aaPredicted RBP31.05■■■□□ 2.56
CUEDC1-201ENST00000360238 SLC4A9Q96Q91 983 aa31.05■■■□□ 2.56
CUEDC1-201ENST00000360238 FOXP2O15409 715 aa31.05■■■□□ 2.56
CUEDC1-201ENST00000360238 ADCY5O95622 1261 aa31.05■■■□□ 2.56
CUEDC1-201ENST00000360238 GPTP24298 496 aa31.05■■■□□ 2.56
CUEDC1-201ENST00000360238 ZAP70P43403 619 aa31.05■■■□□ 2.56
CUEDC1-201ENST00000360238 EVCP57679 992 aa31.05■■■□□ 2.56
CUEDC1-201ENST00000360238 IMMTQ16891 758 aaKnown RBP31.05■■■□□ 2.56
CUEDC1-201ENST00000360238 ANKRD18BA2A2Z9 1011 aa31.04■■■□□ 2.56
CUEDC1-201ENST00000360238 GREM2Q9H772 168 aa31.04■■■□□ 2.56
CUEDC1-201ENST00000360238 KAT6BQ8WYB5 2073 aa31.03■■■□□ 2.56
CUEDC1-201ENST00000360238 TTLL5Q6EMB2 1281 aa31.03■■■□□ 2.56
CUEDC1-201ENST00000360238 LDHAL6AQ6ZMR3 332 aa31.03■■■□□ 2.56
CUEDC1-201ENST00000360238 RBM43Q6ZSC3 357 aaKnown RBP31.03■■■□□ 2.56
CUEDC1-201ENST00000360238 ATRNO75882 1429 aa31.03■■■□□ 2.56
CUEDC1-201ENST00000360238 PDIA3P30101 505 aaKnown RBP31.03■■■□□ 2.56
CUEDC1-201ENST00000360238 DACT1Q9NYF0 836 aa31.03■■■□□ 2.56
CUEDC1-201ENST00000360238 ZBTB1Q9Y2K1 713 aa31.03■■■□□ 2.56
CUEDC1-201ENST00000360238 KDM4FA0A1W2PPD8 638 aa31.02■■■□□ 2.56
CUEDC1-201ENST00000360238 ERVV-1B6SEH8 477 aa31.02■■■□□ 2.56
CUEDC1-201ENST00000360238 SYNE4Q8N205 404 aa31.02■■■□□ 2.56
CUEDC1-201ENST00000360238 DDX24Q9GZR7 859 aaKnown RBP eCLIP31.02■■■□□ 2.56
CUEDC1-201ENST00000360238 TNMDQ9H2S6 317 aa31.02■■■□□ 2.56
CUEDC1-201ENST00000360238 CLSTN2Q9H4D0 955 aa31.02■■■□□ 2.56
CUEDC1-201ENST00000360238 IRS4O14654 1257 aaPredicted RBP31.01■■■□□ 2.55
CUEDC1-201ENST00000360238 VGLL2Q8N8G2 317 aa31.01■■■□□ 2.55
CUEDC1-201ENST00000360238 PGBD1Q96JS3 809 aa31.01■■■□□ 2.55
CUEDC1-201ENST00000360238 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP31■■■□□ 2.55
CUEDC1-201ENST00000360238 TPM2P07951 284 aa31■■■□□ 2.55
CUEDC1-201ENST00000360238 IL6STP40189 918 aaPredicted RBP31■■■□□ 2.55
CUEDC1-201ENST00000360238 TERF1P54274 439 aa31■■■□□ 2.55
CUEDC1-201ENST00000360238 ATL3Q6DD88 541 aa31■■■□□ 2.55
CUEDC1-201ENST00000360238 ZSCAN25Q6NSZ9 544 aa31■■■□□ 2.55
CUEDC1-201ENST00000360238 FAM200AQ8TCP9 573 aa31■■■□□ 2.55
CUEDC1-201ENST00000360238 AHDC1Q5TGY3 1603 aaPredicted RBP31■■■□□ 2.55
CUEDC1-201ENST00000360238 PDE8AO60658 829 aa30.99■■■□□ 2.55
CUEDC1-201ENST00000360238 CCT2P78371 535 aaKnown RBP30.99■■■□□ 2.55
CUEDC1-201ENST00000360238 CNNM1Q9NRU3 951 aa30.99■■■□□ 2.55
CUEDC1-201ENST00000360238 TRMT112Q9UI30 125 aaKnown RBP30.99■■■□□ 2.55
CUEDC1-201ENST00000360238 EXOC5O00471 708 aa30.99■■■□□ 2.55
CUEDC1-201ENST00000360238 FGAP02671 866 aa30.99■■■□□ 2.55
CUEDC1-201ENST00000360238 MCAMP43121 646 aa30.99■■■□□ 2.55
CUEDC1-201ENST00000360238 TYRO3Q06418 890 aa30.99■■■□□ 2.55
CUEDC1-201ENST00000360238 BICD2Q8TD16 824 aa30.99■■■□□ 2.55
CUEDC1-201ENST00000360238 PUS7LQ9H0K6 701 aaKnown RBP30.99■■■□□ 2.55
CUEDC1-201ENST00000360238 ROBO1Q9Y6N7 1651 aa30.99■■■□□ 2.55
CUEDC1-201ENST00000360238 TTF1Q15361 905 aaPredicted RBP30.98■■■□□ 2.55
CUEDC1-201ENST00000360238 WDR19Q8NEZ3 1342 aa30.98■■■□□ 2.55
CUEDC1-201ENST00000360238 MYO5AQ9Y4I1 1855 aaKnown RBP30.98■■■□□ 2.55
CUEDC1-201ENST00000360238 NCOA5Q9HCD5 579 aaKnown RBP30.98■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms