RNA–Protein interactions for RNA: ENST00000359171.8

NUP98-203, Transcript of nucleoporin 98, humanhuman

TSL 5 BASIC

Gene NUP98, Length 7,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-203ENST00000359171 ZBTB3Q9H5J0 574 aa16.46■□□□□ 0.23
NUP98-203ENST00000359171 SYNCQ9H7C4 482 aa16.46■□□□□ 0.23
NUP98-203ENST00000359171 HLA-DOAP06340 250 aa16.46■□□□□ 0.23
NUP98-203ENST00000359171 NEK11Q8NG66 645 aa16.46■□□□□ 0.23
NUP98-203ENST00000359171 KIAA1524Q8TCG1 905 aa16.46■□□□□ 0.23
NUP98-203ENST00000359171 IFT74Q96LB3 600 aa16.46■□□□□ 0.23
NUP98-203ENST00000359171 ALDH1L1O75891 902 aa16.46■□□□□ 0.23
NUP98-203ENST00000359171 CALCOCO2Q13137 446 aa16.46■□□□□ 0.23
NUP98-203ENST00000359171 SAMM50Q9Y512 469 aa16.46■□□□□ 0.23
NUP98-203ENST00000359171 ATP8B2P98198 1209 aa16.46■□□□□ 0.22
NUP98-203ENST00000359171 FMNL3Q8IVF7 1028 aa16.46■□□□□ 0.22
NUP98-203ENST00000359171 WDR66Q8TBY9 1149 aa16.45■□□□□ 0.22
NUP98-203ENST00000359171 BICD1Q96G01 975 aa16.45■□□□□ 0.22
NUP98-203ENST00000359171 MYL5Q02045 173 aa16.45■□□□□ 0.22
NUP98-203ENST00000359171 UBXN1Q04323 297 aa16.45■□□□□ 0.22
NUP98-203ENST00000359171 POTEDQ86YR6 584 aa16.45■□□□□ 0.22
NUP98-203ENST00000359171 USHBP1Q8N6Y0 703 aa16.45■□□□□ 0.22
NUP98-203ENST00000359171 MEIS3Q99687 375 aa16.45■□□□□ 0.22
NUP98-203ENST00000359171 TSGA10Q9BZW7 698 aa16.45■□□□□ 0.22
NUP98-203ENST00000359171 HECW1Q76N89 1606 aa16.45■□□□□ 0.22
NUP98-203ENST00000359171 JAKMIP2Q96AA8 810 aa16.45■□□□□ 0.22
NUP98-203ENST00000359171 TLDC2A0PJX2 215 aa16.45■□□□□ 0.22
NUP98-203ENST00000359171 ATP2A2P16615 1042 aaKnown RBP16.45■□□□□ 0.22
NUP98-203ENST00000359171 TERF1P54274 439 aa16.45■□□□□ 0.22
NUP98-203ENST00000359171 GSTA5Q7RTV2 222 aa16.45■□□□□ 0.22
NUP98-203ENST00000359171 IFT81Q8WYA0 676 aa16.45■□□□□ 0.22
NUP98-203ENST00000359171 LRRC2Q9BYS8 371 aa16.45■□□□□ 0.22
NUP98-203ENST00000359171 TTC41PQ6P2S7 1318 aa16.45■□□□□ 0.22
NUP98-203ENST00000359171 ANKRD36BQ8N2N9 1353 aa16.45■□□□□ 0.22
NUP98-203ENST00000359171 CALML3P27482 149 aa16.45■□□□□ 0.22
NUP98-203ENST00000359171 NUTM2AQ8IVF1 878 aaPredicted RBP16.44■□□□□ 0.22
NUP98-203ENST00000359171 AFAP1L1Q8TED9 768 aa16.44■□□□□ 0.22
NUP98-203ENST00000359171 IFIT1BQ5T764 474 aaKnown RBP16.44■□□□□ 0.22
NUP98-203ENST00000359171 DCAF8L1A6NGE4 600 aa16.44■□□□□ 0.22
NUP98-203ENST00000359171 GIGYF1O75420 1035 aaPredicted RBP16.44■□□□□ 0.22
NUP98-203ENST00000359171 CALM1P0DP23 149 aa16.44■□□□□ 0.22
NUP98-203ENST00000359171 CALM2P0DP24 149 aa16.44■□□□□ 0.22
NUP98-203ENST00000359171 CALM3P0DP25 149 aa16.44■□□□□ 0.22
NUP98-203ENST00000359171 U2AF2P26368 475 aaKnown RBP eCLIP16.44■□□□□ 0.224e-7■■■■□ 20
NUP98-203ENST00000359171 GSTO1P78417 241 aa16.44■□□□□ 0.22
NUP98-203ENST00000359171 BAG1Q99933 345 aaPredicted RBP16.44■□□□□ 0.22
NUP98-203ENST00000359171 MAP7D1Q3KQU3 841 aa16.44■□□□□ 0.22
NUP98-203ENST00000359171 MTUS1Q9ULD2 1270 aa16.44■□□□□ 0.22
NUP98-203ENST00000359171 NAA25Q14CX7 972 aa16.44■□□□□ 0.22
NUP98-203ENST00000359171 GTF3C6Q969F1 213 aa16.44■□□□□ 0.22
NUP98-203ENST00000359171 STX8Q9UNK0 236 aa16.44■□□□□ 0.22
NUP98-203ENST00000359171 RALGAPBQ86X10 1494 aa16.44■□□□□ 0.22
NUP98-203ENST00000359171 DNAJC21Q5F1R6 531 aaKnown RBP16.43■□□□□ 0.22
NUP98-203ENST00000359171 CCDC63Q8NA47 563 aa16.43■□□□□ 0.22
NUP98-203ENST00000359171 MRVI1Q9Y6F6 885 aa16.43■□□□□ 0.22
NUP98-203ENST00000359171 WAPLQ7Z5K2 1190 aa16.43■□□□□ 0.22
NUP98-203ENST00000359171 NKIRAS1Q9NYS0 192 aa16.43■□□□□ 0.22
NUP98-203ENST00000359171 UTP14AQ9BVJ6 771 aaKnown RBP16.43■□□□□ 0.22
NUP98-203ENST00000359171 RAD50Q92878 1312 aa16.43■□□□□ 0.22
NUP98-203ENST00000359171 SCAF11Q99590 1463 aaKnown RBP16.43■□□□□ 0.22
NUP98-203ENST00000359171 INTS8Q75QN2 995 aaKnown RBP16.43■□□□□ 0.22
NUP98-203ENST00000359171 TRIM7Q9C029 511 aa16.43■□□□□ 0.22
NUP98-203ENST00000359171 ATP5DP30049 168 aa16.43■□□□□ 0.22
NUP98-203ENST00000359171 KRT79Q5XKE5 535 aa16.43■□□□□ 0.22
NUP98-203ENST00000359171 AKR1B15C9JRZ8 316 aaPredicted RBP16.43■□□□□ 0.22
NUP98-203ENST00000359171 WASLO00401 505 aaPredicted RBP16.43■□□□□ 0.22
NUP98-203ENST00000359171 AK2P54819 239 aa16.43■□□□□ 0.22
NUP98-203ENST00000359171 PUS7Q96PZ0 661 aaKnown RBP16.43■□□□□ 0.22
NUP98-203ENST00000359171 IGSF3O75054 1194 aa16.42■□□□□ 0.22
NUP98-203ENST00000359171 CCDC122Q5T0U0 273 aa16.42■□□□□ 0.22
NUP98-203ENST00000359171 ATP6V0A2Q9Y487 856 aa16.42■□□□□ 0.22
NUP98-203ENST00000359171 PPP1R2P41236 205 aa16.42■□□□□ 0.22
NUP98-203ENST00000359171 PLCB3Q01970 1234 aa16.42■□□□□ 0.22
NUP98-203ENST00000359171 IMPG2Q9BZV3 1241 aa16.42■□□□□ 0.22
NUP98-203ENST00000359171 KRBA2Q6ZNG9 492 aa16.42■□□□□ 0.22
NUP98-203ENST00000359171 RPGRQ92834 1020 aaKnown RBP16.42■□□□□ 0.22
NUP98-203ENST00000359171 STMN2Q93045 179 aa16.42■□□□□ 0.22
NUP98-203ENST00000359171 WDHD1O75717 1129 aaPredicted RBP16.42■□□□□ 0.22
NUP98-203ENST00000359171 IQUBQ8NA54 791 aa16.42■□□□□ 0.22
NUP98-203ENST00000359171 KCNK9Q9NPC2 374 aa16.42■□□□□ 0.22
NUP98-203ENST00000359171 NUTM2BA6NNL0 878 aaPredicted RBP16.42■□□□□ 0.22
NUP98-203ENST00000359171 NUTM2EB1AL46 878 aaPredicted RBP16.42■□□□□ 0.22
NUP98-203ENST00000359171 TRIM14Q14142 442 aa16.42■□□□□ 0.22
NUP98-203ENST00000359171 CPSF2Q9P2I0 782 aaKnown RBP16.42■□□□□ 0.22
NUP98-203ENST00000359171 IFNL2Q8IZJ0 200 aa16.41■□□□□ 0.22
NUP98-203ENST00000359171 RGS22Q8NE09 1264 aa16.41■□□□□ 0.22
NUP98-203ENST00000359171 PPP1R9BQ96SB3 815 aa16.41■□□□□ 0.22
NUP98-203ENST00000359171 C6orf50Q9HD87 102 aa16.41■□□□□ 0.22
NUP98-203ENST00000359171 TTF2Q9UNY4 1162 aaKnown RBP16.41■□□□□ 0.22
NUP98-203ENST00000359171 ATP5J2-PTCD1G3V325 749 aa16.41■□□□□ 0.22
NUP98-203ENST00000359171 NDUFAB1O14561 156 aa16.41■□□□□ 0.22
NUP98-203ENST00000359171 GPTP24298 496 aa16.41■□□□□ 0.22
NUP98-203ENST00000359171 FAM160A1Q05DH4 1040 aa16.41■□□□□ 0.22
NUP98-203ENST00000359171 LMNTD2Q8IXW0 634 aa16.41■□□□□ 0.22
NUP98-203ENST00000359171 CCDC26Q8TAB7 109 aa16.41■□□□□ 0.22
NUP98-203ENST00000359171 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.41■□□□□ 0.22
NUP98-203ENST00000359171 NDC80O14777 642 aa16.41■□□□□ 0.22
NUP98-203ENST00000359171 APBB1IPQ7Z5R6 666 aaPredicted RBP16.41■□□□□ 0.22
NUP98-203ENST00000359171 RTL9Q8NET4 1388 aa16.41■□□□□ 0.22
NUP98-203ENST00000359171 MAP3K1Q13233 1512 aa16.41■□□□□ 0.22
NUP98-203ENST00000359171 SNRPA1P09661 255 aaKnown RBP16.41■□□□□ 0.22
NUP98-203ENST00000359171 IL15P40933 162 aaPredicted RBP16.41■□□□□ 0.22
NUP98-203ENST00000359171 ANKRD13DQ6ZTN6 518 aa16.41■□□□□ 0.22
NUP98-203ENST00000359171 HS2ST1Q7LGA3 356 aa16.41■□□□□ 0.22
NUP98-203ENST00000359171 SEC62Q99442 399 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms