RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 RTL9Q8NET4 1388 aa13.58□□□□□ -0.23
CAPN3-204ENST00000356316 AOC2O75106 756 aa13.58□□□□□ -0.24
CAPN3-204ENST00000356316 USP17L8P0C7I0 530 aa13.58□□□□□ -0.24
CAPN3-204ENST00000356316 HSPA8P11142 646 aaKnown RBP13.58□□□□□ -0.24
CAPN3-204ENST00000356316 HUNKP57058 714 aa13.58□□□□□ -0.24
CAPN3-204ENST00000356316 EXOSC9Q06265 439 aaKnown RBP13.58□□□□□ -0.24
CAPN3-204ENST00000356316 FAM9BQ8IZU0 186 aa13.58□□□□□ -0.24
CAPN3-204ENST00000356316 LINS1Q8NG48 757 aa13.58□□□□□ -0.24
CAPN3-204ENST00000356316 ANKRD2Q9GZV1 360 aa13.58□□□□□ -0.24
CAPN3-204ENST00000356316 CA12O43570 354 aa13.57□□□□□ -0.24
CAPN3-204ENST00000356316 VAMP4O75379 141 aa13.57□□□□□ -0.24
CAPN3-204ENST00000356316 EGFRP00533 1210 aa13.57□□□□□ -0.24
CAPN3-204ENST00000356316 CCT4P50991 539 aaKnown RBP13.57□□□□□ -0.24
CAPN3-204ENST00000356316 OGFOD1Q8N543 542 aa13.57□□□□□ -0.24
CAPN3-204ENST00000356316 FBXW7Q969H0 707 aa13.57□□□□□ -0.24
CAPN3-204ENST00000356316 LEMD3Q9Y2U8 911 aa13.57□□□□□ -0.24
CAPN3-204ENST00000356316 SPEF2Q9C093 1822 aa13.57□□□□□ -0.24
CAPN3-204ENST00000356316 ITGA6P23229 1130 aa13.56□□□□□ -0.24
CAPN3-204ENST00000356316 KCNJ4P48050 445 aa13.56□□□□□ -0.24
CAPN3-204ENST00000356316 ZNF280AP59817 542 aaPredicted RBP13.56□□□□□ -0.24
CAPN3-204ENST00000356316 SCARF1Q14162 830 aa13.56□□□□□ -0.24
CAPN3-204ENST00000356316 CCDC102AQ96A19 550 aa13.56□□□□□ -0.24
CAPN3-204ENST00000356316 PLA2G12BQ9BX93 195 aa13.56□□□□□ -0.24
CAPN3-204ENST00000356316 GBA2Q9HCG7 927 aaPredicted RBP13.56□□□□□ -0.24
CAPN3-204ENST00000356316 MYOZ2Q9NPC6 264 aa13.56□□□□□ -0.24
CAPN3-204ENST00000356316 SCN9AQ15858 1988 aa13.55□□□□□ -0.24
CAPN3-204ENST00000356316 ANKRD18BA2A2Z9 1011 aa13.55□□□□□ -0.24
CAPN3-204ENST00000356316 ADM5C9JUS6 153 aa13.55□□□□□ -0.24
CAPN3-204ENST00000356316 BRPF1P55201 1214 aaPredicted RBP13.55□□□□□ -0.24
CAPN3-204ENST00000356316 NOGQ13253 232 aa13.55□□□□□ -0.24
CAPN3-204ENST00000356316 DLK2Q6UY11 383 aa13.55□□□□□ -0.24
CAPN3-204ENST00000356316 COA1Q9GZY4 146 aa13.55□□□□□ -0.24
CAPN3-204ENST00000356316 GGA3Q9NZ52 723 aa13.55□□□□□ -0.24
CAPN3-204ENST00000356316 MED23Q9ULK4 1368 aa13.55□□□□□ -0.24
CAPN3-204ENST00000356316 CSF1RP07333 972 aa13.54□□□□□ -0.24
CAPN3-204ENST00000356316 ZNF157P51786 506 aaPredicted RBP13.54□□□□□ -0.24
CAPN3-204ENST00000356316 ANGEL2Q5VTE6 544 aaKnown RBP13.54□□□□□ -0.24
CAPN3-204ENST00000356316 RGMBQ6NW40 437 aa13.54□□□□□ -0.24
CAPN3-204ENST00000356316 CHMP3Q9Y3E7 222 aa13.54□□□□□ -0.24
CAPN3-204ENST00000356316 ZNF804BA4D1E1 1349 aa13.54□□□□□ -0.24
CAPN3-204ENST00000356316 MYO3BQ8WXR4 1341 aa13.54□□□□□ -0.24
CAPN3-204ENST00000356316 WTIPA6NIX2 430 aaPredicted RBP13.53□□□□□ -0.24
CAPN3-204ENST00000356316 MMP14P50281 582 aa13.53□□□□□ -0.24
CAPN3-204ENST00000356316 IFIT5Q13325 482 aaKnown RBP13.53□□□□□ -0.24
CAPN3-204ENST00000356316 FAM161AQ3B820 660 aa13.53□□□□□ -0.24
CAPN3-204ENST00000356316 STRIP1Q5VSL9 837 aa13.53□□□□□ -0.24
CAPN3-204ENST00000356316 TTLL5Q6EMB2 1281 aa13.53□□□□□ -0.24
CAPN3-204ENST00000356316 C9orf78Q9NZ63 289 aaPredicted RBP13.53□□□□□ -0.24
CAPN3-204ENST00000356316 THSD7BQ9C0I4 1608 aa13.53□□□□□ -0.24
CAPN3-204ENST00000356316 PSME4Q14997 1843 aa13.53□□□□□ -0.24
CAPN3-204ENST00000356316 F6X3S4 739 aa13.52□□□□□ -0.25
CAPN3-204ENST00000356316 CASP7P55210 303 aa13.52□□□□□ -0.25
CAPN3-204ENST00000356316 TAF7LQ5H9L4 462 aa13.52□□□□□ -0.25
CAPN3-204ENST00000356316 CDCA5Q96FF9 252 aa13.52□□□□□ -0.25
CAPN3-204ENST00000356316 GMLQ99445 158 aa13.52□□□□□ -0.25
CAPN3-204ENST00000356316 TSKSQ9UJT2 592 aa13.52□□□□□ -0.25
CAPN3-204ENST00000356316 HDAC9Q9UKV0 1011 aa13.52□□□□□ -0.25
CAPN3-204ENST00000356316 ZNF609O15014 1411 aa13.52□□□□□ -0.25
CAPN3-204ENST00000356316 ASTN2O75129 1339 aaPredicted RBP13.51□□□□□ -0.25
CAPN3-204ENST00000356316 PITPNM2Q9BZ72 1349 aa13.51□□□□□ -0.25
CAPN3-204ENST00000356316 CHRNDQ07001 517 aa13.51□□□□□ -0.25
CAPN3-204ENST00000356316 MKRN4PQ13434 485 aaPredicted RBP13.51□□□□□ -0.25
CAPN3-204ENST00000356316 CCDC57Q2TAC2 916 aa13.51□□□□□ -0.25
CAPN3-204ENST00000356316 DACT2Q5SW24 774 aa13.51□□□□□ -0.25
CAPN3-204ENST00000356316 BEND3Q5T5X7 828 aa13.51□□□□□ -0.25
CAPN3-204ENST00000356316 SLC4A10Q6U841 1118 aa13.51□□□□□ -0.25
CAPN3-204ENST00000356316 FKBP1BP68106 108 aa13.5□□□□□ -0.25
CAPN3-204ENST00000356316 TXNRD3Q86VQ6 643 aa13.5□□□□□ -0.25
CAPN3-204ENST00000356316 GRM8O00222 908 aa13.49□□□□□ -0.25
CAPN3-204ENST00000356316 NF2P35240 595 aa13.49□□□□□ -0.25
CAPN3-204ENST00000356316 GTF2IP78347 998 aa13.49□□□□□ -0.25
CAPN3-204ENST00000356316 FOXO4P98177 505 aa13.49□□□□□ -0.25
CAPN3-204ENST00000356316 KIF23Q02241 960 aaPredicted RBP13.49□□□□□ -0.25
CAPN3-204ENST00000356316 TTLL12Q14166 644 aaPredicted RBP13.49□□□□□ -0.25
CAPN3-204ENST00000356316 NBPF9Q3BBW0 867 aa13.49□□□□□ -0.25
CAPN3-204ENST00000356316 LMBR1LQ6UX01 489 aa13.49□□□□□ -0.25
CAPN3-204ENST00000356316 REM2Q8IYK8 340 aaPredicted RBP13.49□□□□□ -0.25
CAPN3-204ENST00000356316 ABHD8Q96I13 439 aa13.49□□□□□ -0.25
CAPN3-204ENST00000356316 MXD3Q9BW11 206 aa13.49□□□□□ -0.25
CAPN3-204ENST00000356316 CNNM1Q9NRU3 951 aa13.49□□□□□ -0.25
CAPN3-204ENST00000356316 FAM155AB1AL88 458 aaPredicted RBP13.48□□□□□ -0.25
CAPN3-204ENST00000356316 PLIN1O60240 522 aa13.48□□□□□ -0.25
CAPN3-204ENST00000356316 TAF5LO75529 589 aa13.48□□□□□ -0.25
CAPN3-204ENST00000356316 ALDH1L1O75891 902 aa13.48□□□□□ -0.25
CAPN3-204ENST00000356316 LDHAL6AQ6ZMR3 332 aa13.48□□□□□ -0.25
CAPN3-204ENST00000356316 ZNF804AQ7Z570 1209 aa13.48□□□□□ -0.25
CAPN3-204ENST00000356316 KIAA0825Q8IV33 1275 aa13.48□□□□□ -0.25
CAPN3-204ENST00000356316 HELBQ8NG08 1087 aaPredicted RBP13.48□□□□□ -0.25
CAPN3-204ENST00000356316 ZIC5Q96T25 663 aa13.48□□□□□ -0.25
CAPN3-204ENST00000356316 SRCIN1Q9C0H9 1055 aa13.48□□□□□ -0.25
CAPN3-204ENST00000356316 CD209Q9NNX6 404 aa13.48□□□□□ -0.25
CAPN3-204ENST00000356316 CCDC85CA6NKD9 419 aa13.47□□□□□ -0.25
CAPN3-204ENST00000356316 WNT10BO00744 389 aa13.47□□□□□ -0.25
CAPN3-204ENST00000356316 SCAF8Q9UPN6 1271 aaKnown RBP13.47□□□□□ -0.25
CAPN3-204ENST00000356316 SLC10A3P09131 477 aa13.46□□□□□ -0.25
CAPN3-204ENST00000356316 KLRK1P26718 216 aa13.46□□□□□ -0.25
CAPN3-204ENST00000356316 DLGAP5Q15398 846 aa13.46□□□□□ -0.25
CAPN3-204ENST00000356316 PRAMEF18Q5VWM3 479 aa13.46□□□□□ -0.25
CAPN3-204ENST00000356316 APOBEC3FQ8IUX4 373 aaKnown RBP13.46□□□□□ -0.25
CAPN3-204ENST00000356316 SAGE1Q9NXZ1 904 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms