RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 RAD17O75943 681 aa25.8■■□□□ 1.72
SMARCB1-202ENST00000344921 VGLL2Q8N8G2 317 aa25.8■■□□□ 1.72
SMARCB1-202ENST00000344921 PUM3Q15397 648 aaKnown RBP25.79■■□□□ 1.72
SMARCB1-202ENST00000344921 YDJCA8MPS7 323 aa25.78■■□□□ 1.72
SMARCB1-202ENST00000344921 CXCL9Q07325 125 aa25.78■■□□□ 1.72
SMARCB1-202ENST00000344921 CIAPIN1Q6FI81 312 aa25.78■■□□□ 1.72
SMARCB1-202ENST00000344921 ZNF804AQ7Z570 1209 aa25.77■■□□□ 1.72
SMARCB1-202ENST00000344921 GPC2Q8N158 579 aa25.77■■□□□ 1.72
SMARCB1-202ENST00000344921 COA1Q9GZY4 146 aa25.77■■□□□ 1.72
SMARCB1-202ENST00000344921 IFIT1P09914 478 aaKnown RBP25.77■■□□□ 1.72
SMARCB1-202ENST00000344921 TNIP1Q15025 636 aa25.77■■□□□ 1.72
SMARCB1-202ENST00000344921 PODNQ7Z5L7 613 aa25.77■■□□□ 1.72
SMARCB1-202ENST00000344921 TFCP2Q12800 502 aa25.76■■□□□ 1.71
SMARCB1-202ENST00000344921 C15orf52Q6ZUT6 534 aaKnown RBP25.76■■□□□ 1.71
SMARCB1-202ENST00000344921 KCNQ5Q9NR82 932 aa25.76■■□□□ 1.71
SMARCB1-202ENST00000344921 SLC5A1P13866 664 aa25.75■■□□□ 1.71
SMARCB1-202ENST00000344921 VPS37DQ86XT2 251 aa25.75■■□□□ 1.71
SMARCB1-202ENST00000344921 LPIN2Q92539 896 aa25.75■■□□□ 1.71
SMARCB1-202ENST00000344921 RRAGCQ9HB90 399 aa25.75■■□□□ 1.71
SMARCB1-202ENST00000344921 GYG1P46976 350 aa25.74■■□□□ 1.71
SMARCB1-202ENST00000344921 ATP2B3Q16720 1220 aa25.74■■□□□ 1.71
SMARCB1-202ENST00000344921 CAVIN4Q5BKX8 364 aa25.74■■□□□ 1.71
SMARCB1-202ENST00000344921 SIRT2Q8IXJ6 389 aa25.74■■□□□ 1.71
SMARCB1-202ENST00000344921 FBXW7Q969H0 707 aa25.74■■□□□ 1.71
SMARCB1-202ENST00000344921 CD209Q9NNX6 404 aa25.74■■□□□ 1.71
SMARCB1-202ENST00000344921 NMRK2Q9NPI5 230 aa25.74■■□□□ 1.71
SMARCB1-202ENST00000344921 AKAP2Q9Y2D5 859 aa25.74■■□□□ 1.71
SMARCB1-202ENST00000344921 IRS2Q9Y4H2 1338 aa25.73■■□□□ 1.71
SMARCB1-202ENST00000344921 PSMD14O00487 310 aa25.73■■□□□ 1.71
SMARCB1-202ENST00000344921 FGFR2P21802 821 aa25.73■■□□□ 1.71
SMARCB1-202ENST00000344921 HIBADHP31937 336 aaKnown RBP25.73■■□□□ 1.71
SMARCB1-202ENST00000344921 EXOC6BQ9Y2D4 811 aa25.73■■□□□ 1.71
SMARCB1-202ENST00000344921 NOP58Q9Y2X3 529 aaKnown RBP25.73■■□□□ 1.71
SMARCB1-202ENST00000344921 IRX6P78412 446 aaPredicted RBP25.72■■□□□ 1.71
SMARCB1-202ENST00000344921 FAM84BQ96KN1 310 aaPredicted RBP25.72■■□□□ 1.71
SMARCB1-202ENST00000344921 SASH1O94885 1247 aa25.71■■□□□ 1.71
SMARCB1-202ENST00000344921 HSP90AB4PQ58FF6 505 aa25.71■■□□□ 1.71
SMARCB1-202ENST00000344921 SCN9AQ15858 1988 aa25.7■■□□□ 1.7
SMARCB1-202ENST00000344921 USP17L3A6NCW0 530 aa25.7■■□□□ 1.7
SMARCB1-202ENST00000344921 USP17L4A6NCW7 530 aa25.7■■□□□ 1.7
SMARCB1-202ENST00000344921 VEGFAP15692 232 aaPredicted RBP25.7■■□□□ 1.7
SMARCB1-202ENST00000344921 USP17L1Q7RTZ2 530 aa25.7■■□□□ 1.7
SMARCB1-202ENST00000344921 EXOC6Q8TAG9 804 aa25.7■■□□□ 1.7
SMARCB1-202ENST00000344921 NEUROD6Q96NK8 337 aa25.7■■□□□ 1.7
SMARCB1-202ENST00000344921 FRAT2O75474 233 aaPredicted RBP25.69■■□□□ 1.7
SMARCB1-202ENST00000344921 LMOD1P29536 600 aaPredicted RBP25.69■■□□□ 1.7
SMARCB1-202ENST00000344921 TIMM10P62072 90 aa25.69■■□□□ 1.7
SMARCB1-202ENST00000344921 A0A1B0GUL7 405 aa25.68■■□□□ 1.7
SMARCB1-202ENST00000344921 IQCA1LA6NCM1 817 aa25.68■■□□□ 1.7
SMARCB1-202ENST00000344921 APBB1O00213 710 aa25.68■■□□□ 1.7
SMARCB1-202ENST00000344921 BCAMP50895 628 aa25.68■■□□□ 1.7
SMARCB1-202ENST00000344921 TTLL5Q6EMB2 1281 aa25.68■■□□□ 1.7
SMARCB1-202ENST00000344921 ERC1Q8IUD2 1116 aa25.68■■□□□ 1.7
SMARCB1-202ENST00000344921 L3MBTL3Q96JM7 780 aaPredicted RBP25.68■■□□□ 1.7
SMARCB1-202ENST00000344921 ZBTB12Q9Y330 459 aaPredicted RBP25.68■■□□□ 1.7
SMARCB1-202ENST00000344921 PCDHB15Q9Y5E8 787 aa25.68■■□□□ 1.7
SMARCB1-202ENST00000344921 WDR90Q96KV7 1748 aa25.68■■□□□ 1.7
SMARCB1-202ENST00000344921 IL1R1P14778 569 aa25.68■■□□□ 1.7
SMARCB1-202ENST00000344921 GMPSP49915 693 aaPredicted RBP25.68■■□□□ 1.7
SMARCB1-202ENST00000344921 GTF2IP78347 998 aa25.68■■□□□ 1.7
SMARCB1-202ENST00000344921 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.68■■□□□ 1.7
SMARCB1-202ENST00000344921 AAMPQ13685 434 aa25.67■■□□□ 1.7
SMARCB1-202ENST00000344921 FBXO33Q7Z6M2 555 aa25.67■■□□□ 1.7
SMARCB1-202ENST00000344921 HACL1Q9UJ83 578 aa25.67■■□□□ 1.7
SMARCB1-202ENST00000344921 IQSEC3Q9UPP2 1182 aaPredicted RBP25.67■■□□□ 1.7
SMARCB1-202ENST00000344921 CENPBP07199 599 aaPredicted RBP25.66■■□□□ 1.7
SMARCB1-202ENST00000344921 VIL1P09327 827 aaKnown RBP25.66■■□□□ 1.7
SMARCB1-202ENST00000344921 C16orf71Q8IYS4 520 aaPredicted RBP25.66■■□□□ 1.7
SMARCB1-202ENST00000344921 POTECB2RU33 542 aa25.66■■□□□ 1.7
SMARCB1-202ENST00000344921 SCNN1DP51172 638 aa25.66■■□□□ 1.7
SMARCB1-202ENST00000344921 GORABQ5T7V8 394 aa25.66■■□□□ 1.7
SMARCB1-202ENST00000344921 STRIP1Q5VSL9 837 aa25.66■■□□□ 1.7
SMARCB1-202ENST00000344921 BCL11AQ9H165 835 aa25.66■■□□□ 1.7
SMARCB1-202ENST00000344921 RSBN1LQ6PCB5 846 aaPredicted RBP25.65■■□□□ 1.7
SMARCB1-202ENST00000344921 TDRD7Q8NHU6 1098 aaKnown RBP25.65■■□□□ 1.7
SMARCB1-202ENST00000344921 XAGE2Q96GT9 111 aa25.65■■□□□ 1.7
SMARCB1-202ENST00000344921 JAG2Q9Y219 1238 aa25.65■■□□□ 1.7
SMARCB1-202ENST00000344921 RPS12P25398 132 aaKnown RBP25.64■■□□□ 1.7
SMARCB1-202ENST00000344921 ADORA1P30542 326 aa25.64■■□□□ 1.7
SMARCB1-202ENST00000344921 TNNI3KQ59H18 835 aa25.64■■□□□ 1.7
SMARCB1-202ENST00000344921 GNL3LQ9NVN8 582 aaKnown RBP25.64■■□□□ 1.7
SMARCB1-202ENST00000344921 FPGT-TNNI3KV9GXZ4 949 aa25.64■■□□□ 1.7
SMARCB1-202ENST00000344921 SCN4AP35499 1836 aa25.63■■□□□ 1.69
SMARCB1-202ENST00000344921 PSME4Q14997 1843 aa25.63■■□□□ 1.69
SMARCB1-202ENST00000344921 GPR108Q9NPR9 543 aa25.63■■□□□ 1.69
SMARCB1-202ENST00000344921 GPRC5DQ9NZD1 345 aa25.63■■□□□ 1.69
SMARCB1-202ENST00000344921 CNOT7Q9UIV1 285 aaKnown RBP25.63■■□□□ 1.69
SMARCB1-202ENST00000344921 ZNF609O15014 1411 aa25.63■■□□□ 1.69
SMARCB1-202ENST00000344921 KIF3CO14782 793 aa25.63■■□□□ 1.69
SMARCB1-202ENST00000344921 RAB11FIP3O75154 756 aa25.63■■□□□ 1.69
SMARCB1-202ENST00000344921 EPS15P42566 896 aa25.63■■□□□ 1.69
SMARCB1-202ENST00000344921 DACT2Q5SW24 774 aa25.63■■□□□ 1.69
SMARCB1-202ENST00000344921 RHPN1Q8TCX5 695 aa25.63■■□□□ 1.69
SMARCB1-202ENST00000344921 DPF2Q92785 391 aa25.63■■□□□ 1.69
SMARCB1-202ENST00000344921 KIF1BPQ96EK5 621 aa25.63■■□□□ 1.69
SMARCB1-202ENST00000344921 MXD3Q9BW11 206 aa25.63■■□□□ 1.69
SMARCB1-202ENST00000344921 EPHX2P34913 555 aa25.62■■□□□ 1.69
SMARCB1-202ENST00000344921 CHAF1AQ13111 956 aaPredicted RBP25.62■■□□□ 1.69
SMARCB1-202ENST00000344921 AGBL3Q8NEM8 1001 aa25.62■■□□□ 1.69
SMARCB1-202ENST00000344921 H7C1D1 291 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms