RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 RTL9Q8NET4 1388 aa16.8■□□□□ 0.28
HERPUD1-202ENST00000344114 ADM5C9JUS6 153 aa16.79■□□□□ 0.28
HERPUD1-202ENST00000344114 KIF23Q02241 960 aaPredicted RBP16.79■□□□□ 0.28
HERPUD1-202ENST00000344114 SF3B3Q15393 1217 aaKnown RBP16.79■□□□□ 0.28
HERPUD1-202ENST00000344114 CELF1Q92879 486 aaKnown RBP16.79■□□□□ 0.28
HERPUD1-202ENST00000344114 DBF4Q9UBU7 674 aaPredicted RBP16.79■□□□□ 0.28
HERPUD1-202ENST00000344114 POLLQ9UGP5 575 aa16.79■□□□□ 0.28
HERPUD1-202ENST00000344114 RBM19Q9Y4C8 960 aaKnown RBP16.79■□□□□ 0.28
HERPUD1-202ENST00000344114 ECE2O60344 883 aa16.78■□□□□ 0.28
HERPUD1-202ENST00000344114 SLC10A3P09131 477 aa16.78■□□□□ 0.28
HERPUD1-202ENST00000344114 SMC5Q8IY18 1101 aa16.78■□□□□ 0.28
HERPUD1-202ENST00000344114 DCPSQ96C86 337 aaKnown RBP16.78■□□□□ 0.28
HERPUD1-202ENST00000344114 RNF186Q9NXI6 227 aa16.78■□□□□ 0.28
HERPUD1-202ENST00000344114 CHPF2Q9P2E5 772 aa16.78■□□□□ 0.28
HERPUD1-202ENST00000344114 NSFL1CQ9UNZ2 370 aaKnown RBP16.78■□□□□ 0.28
HERPUD1-202ENST00000344114 ZNF157P51786 506 aaPredicted RBP16.77■□□□□ 0.28
HERPUD1-202ENST00000344114 GPSM2P81274 684 aa16.77■□□□□ 0.28
HERPUD1-202ENST00000344114 ISCA1Q9BUE6 129 aa16.77■□□□□ 0.28
HERPUD1-202ENST00000344114 KCNQ5Q9NR82 932 aa16.77■□□□□ 0.28
HERPUD1-202ENST00000344114 PDE4DIPQ5VU43 2346 aa16.77■□□□□ 0.28
HERPUD1-202ENST00000344114 ZNF609O15014 1411 aa16.77■□□□□ 0.27
HERPUD1-202ENST00000344114 RIMBP2O15034 1052 aa16.77■□□□□ 0.27
HERPUD1-202ENST00000344114 KIF4BQ2VIQ3 1234 aa16.77■□□□□ 0.27
HERPUD1-202ENST00000344114 SLC4A10Q6U841 1118 aa16.77■□□□□ 0.27
HERPUD1-202ENST00000344114 PLBD2Q8NHP8 589 aa16.77■□□□□ 0.27
HERPUD1-202ENST00000344114 EYA3Q99504 573 aa16.77■□□□□ 0.27
HERPUD1-202ENST00000344114 F6X3S4 739 aa16.76■□□□□ 0.27
HERPUD1-202ENST00000344114 C6orf229H3BNL8 230 aa16.76■□□□□ 0.27
HERPUD1-202ENST00000344114 TRPA1O75762 1119 aa16.76■□□□□ 0.27
HERPUD1-202ENST00000344114 VIL1P09327 827 aaKnown RBP16.76■□□□□ 0.27
HERPUD1-202ENST00000344114 RGS3P49796 1198 aa16.76■□□□□ 0.27
HERPUD1-202ENST00000344114 GCC1Q96CN9 775 aa16.76■□□□□ 0.27
HERPUD1-202ENST00000344114 FAM89AQ96GI7 184 aa16.76■□□□□ 0.27
HERPUD1-202ENST00000344114 HYPKQ9NX55 129 aa16.76■□□□□ 0.27
HERPUD1-202ENST00000344114 PAPPA2Q9BXP8 1791 aa16.75■□□□□ 0.27
HERPUD1-202ENST00000344114 AK9Q5TCS8 1911 aa16.75■□□□□ 0.27
HERPUD1-202ENST00000344114 DOK7Q18PE1 504 aa16.75■□□□□ 0.27
HERPUD1-202ENST00000344114 RBM26Q5T8P6 1007 aaKnown RBP16.75■□□□□ 0.27
HERPUD1-202ENST00000344114 SKAP1Q86WV1 359 aa16.75■□□□□ 0.27
HERPUD1-202ENST00000344114 TBC1D16Q8TBP0 767 aa16.75■□□□□ 0.27
HERPUD1-202ENST00000344114 CSRNP1Q96S65 589 aa16.75■□□□□ 0.27
HERPUD1-202ENST00000344114 C1orf115Q9H7X2 142 aa16.75■□□□□ 0.27
HERPUD1-202ENST00000344114 PHAXQ9H814 394 aaKnown RBP16.75■□□□□ 0.27
HERPUD1-202ENST00000344114 GGA3Q9NZ52 723 aa16.75■□□□□ 0.27
HERPUD1-202ENST00000344114 GNAI3P08754 354 aa16.74■□□□□ 0.27
HERPUD1-202ENST00000344114 SOX10P56693 466 aa16.74■□□□□ 0.27
HERPUD1-202ENST00000344114 ANKRD13DQ6ZTN6 518 aa16.74■□□□□ 0.27
HERPUD1-202ENST00000344114 SULF1Q8IWU6 871 aa16.74■□□□□ 0.27
HERPUD1-202ENST00000344114 RPAP2Q8IXW5 612 aaPredicted RBP16.74■□□□□ 0.27
HERPUD1-202ENST00000344114 ANKRD44Q8N8A2 993 aa16.74■□□□□ 0.27
HERPUD1-202ENST00000344114 PODXL2Q9NZ53 605 aa16.74■□□□□ 0.27
HERPUD1-202ENST00000344114 CTU1Q7Z7A3 348 aaKnown RBP16.73■□□□□ 0.27
HERPUD1-202ENST00000344114 RASAL3Q86YV0 1011 aa16.73■□□□□ 0.27
HERPUD1-202ENST00000344114 REM2Q8IYK8 340 aaPredicted RBP16.73■□□□□ 0.27
HERPUD1-202ENST00000344114 CDCA5Q96FF9 252 aa16.73■□□□□ 0.27
HERPUD1-202ENST00000344114 MEIS3Q99687 375 aa16.73■□□□□ 0.27
HERPUD1-202ENST00000344114 ASTN2O75129 1339 aaPredicted RBP16.72■□□□□ 0.27
HERPUD1-202ENST00000344114 ATP5J2-PTCD1G3V325 749 aa16.72■□□□□ 0.27
HERPUD1-202ENST00000344114 PDE4AP27815 886 aa16.72■□□□□ 0.27
HERPUD1-202ENST00000344114 ZNF280AP59817 542 aaPredicted RBP16.72■□□□□ 0.27
HERPUD1-202ENST00000344114 RPS8P62241 208 aaKnown RBP16.72■□□□□ 0.27
HERPUD1-202ENST00000344114 TRIM28Q13263 835 aaKnown RBP16.72■□□□□ 0.27
HERPUD1-202ENST00000344114 DNAAF4Q8WXU2 420 aa16.72■□□□□ 0.27
HERPUD1-202ENST00000344114 BACH2Q9BYV9 841 aa16.72■□□□□ 0.27
HERPUD1-202ENST00000344114 ZNF646O15015 1829 aaPredicted RBP16.71■□□□□ 0.27
HERPUD1-202ENST00000344114 IRS4O14654 1257 aaPredicted RBP16.71■□□□□ 0.27
HERPUD1-202ENST00000344114 DDX58O95786 925 aaKnown RBP16.71■□□□□ 0.27
HERPUD1-202ENST00000344114 CEP85Q6P2H3 762 aa16.71■□□□□ 0.27
HERPUD1-202ENST00000344114 ZC3H12CQ9C0D7 883 aaKnown RBP16.71■□□□□ 0.27
HERPUD1-202ENST00000344114 HMMRO75330 724 aa16.7■□□□□ 0.26
HERPUD1-202ENST00000344114 GNAI2P04899 355 aa16.7■□□□□ 0.26
HERPUD1-202ENST00000344114 FKBP1BP68106 108 aa16.7■□□□□ 0.26
HERPUD1-202ENST00000344114 NUCB1Q02818 461 aa16.7■□□□□ 0.26
HERPUD1-202ENST00000344114 SIRT2Q8IXJ6 389 aa16.7■□□□□ 0.26
HERPUD1-202ENST00000344114 AGBL3Q8NEM8 1001 aa16.7■□□□□ 0.26
HERPUD1-202ENST00000344114 SRCIN1Q9C0H9 1055 aa16.7■□□□□ 0.26
HERPUD1-202ENST00000344114 PITPNM2Q9BZ72 1349 aa16.69■□□□□ 0.26
HERPUD1-202ENST00000344114 PI4KAP2A4QPH2 592 aa16.69■□□□□ 0.26
HERPUD1-202ENST00000344114 SCARF1Q14162 830 aa16.69■□□□□ 0.26
HERPUD1-202ENST00000344114 RTL5Q5HYW3 569 aaPredicted RBP16.69■□□□□ 0.26
HERPUD1-202ENST00000344114 ANGEL2Q5VTE6 544 aaKnown RBP16.69■□□□□ 0.26
HERPUD1-202ENST00000344114 RSBN1LQ6PCB5 846 aaPredicted RBP16.69■□□□□ 0.26
HERPUD1-202ENST00000344114 PI4KAP1Q8N8J0 262 aa16.69■□□□□ 0.26
HERPUD1-202ENST00000344114 UFL1O94874 794 aa16.68■□□□□ 0.26
HERPUD1-202ENST00000344114 PRPF38BQ5VTL8 546 aaKnown RBP16.68■□□□□ 0.26
HERPUD1-202ENST00000344114 KSR2Q6VAB6 950 aa16.68■□□□□ 0.26
HERPUD1-202ENST00000344114 GMLQ99445 158 aa16.68■□□□□ 0.26
HERPUD1-202ENST00000344114 SEC31BQ9NQW1 1179 aa16.68■□□□□ 0.26
HERPUD1-202ENST00000344114 MYH3P11055 1940 aa16.68■□□□□ 0.26
HERPUD1-202ENST00000344114 ALDH1L1O75891 902 aa16.67■□□□□ 0.26
HERPUD1-202ENST00000344114 BEND3Q5T5X7 828 aa16.67■□□□□ 0.26
HERPUD1-202ENST00000344114 ZBTB38Q8NAP3 1195 aaPredicted RBP16.67■□□□□ 0.26
HERPUD1-202ENST00000344114 GGA1Q9UJY5 639 aa16.67■□□□□ 0.26
HERPUD1-202ENST00000344114 HPS5Q9UPZ3 1129 aa16.67■□□□□ 0.26
HERPUD1-202ENST00000344114 UBTFL1P0CB47 393 aaPredicted RBP16.66■□□□□ 0.26
HERPUD1-202ENST00000344114 PKN2Q16513 984 aaKnown RBP16.66■□□□□ 0.26
HERPUD1-202ENST00000344114 CHD1LQ86WJ1 897 aa16.66■□□□□ 0.26
HERPUD1-202ENST00000344114 DCTPP1Q9H773 170 aa16.66■□□□□ 0.26
HERPUD1-202ENST00000344114 MYOZ2Q9NPC6 264 aa16.66■□□□□ 0.26
HERPUD1-202ENST00000344114 ANKIB1Q9P2G1 1089 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms