RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 ACEP12821 1306 aa5.46□□□□□ -1.54
CSMD3-203ENST00000343508 AKR1B15C9JRZ8 316 aaPredicted RBP5.46□□□□□ -1.54
CSMD3-203ENST00000343508 PPP1R12BO60237 982 aaPredicted RBP5.46□□□□□ -1.54
CSMD3-203ENST00000343508 KRT18P05783 430 aaKnown RBP5.46□□□□□ -1.54
CSMD3-203ENST00000343508 IFFO1Q0D2I5 559 aa5.46□□□□□ -1.54
CSMD3-203ENST00000343508 RNF187Q5TA31 235 aaPredicted RBP5.46□□□□□ -1.54
CSMD3-203ENST00000343508 HELLSQ9NRZ9 838 aa5.46□□□□□ -1.54
CSMD3-203ENST00000343508 SLC27A2O14975 620 aa5.46□□□□□ -1.54
CSMD3-203ENST00000343508 EIF4A2Q14240 407 aaKnown RBP5.46□□□□□ -1.54
CSMD3-203ENST00000343508 NAA16Q6N069 864 aaPredicted RBP5.46□□□□□ -1.54
CSMD3-203ENST00000343508 TAX1BP1Q86VP1 789 aa5.46□□□□□ -1.54
CSMD3-203ENST00000343508 AFAP1L1Q8TED9 768 aa5.46□□□□□ -1.54
CSMD3-203ENST00000343508 MAP3K12Q12852 859 aa5.46□□□□□ -1.54
CSMD3-203ENST00000343508 BRD3Q15059 726 aa5.46□□□□□ -1.54
CSMD3-203ENST00000343508 CCDC96Q2M329 555 aa5.46□□□□□ -1.54
CSMD3-203ENST00000343508 KIAA1524Q8TCG1 905 aa5.46□□□□□ -1.54
CSMD3-203ENST00000343508 A0A1B0GVL5 298 aa5.46□□□□□ -1.54
CSMD3-203ENST00000343508 GOLGA8AA7E2F4 631 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 SPECC1Q5M775 1068 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 SPATS2Q86XZ4 545 aaKnown RBP5.45□□□□□ -1.54
CSMD3-203ENST00000343508 GOLGA5Q8TBA6 731 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 CLTCL1P53675 1640 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 MAP3K5Q99683 1374 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 IFIT3O14879 490 aaKnown RBP5.45□□□□□ -1.54
CSMD3-203ENST00000343508 N4BP3O15049 544 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 CD2BP2O95400 341 aaKnown RBP5.45□□□□□ -1.54
CSMD3-203ENST00000343508 TDRD12Q587J7 1177 aaKnown RBP5.45□□□□□ -1.54
CSMD3-203ENST00000343508 CCDC178Q5BJE1 867 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 DNAJC21Q5F1R6 531 aaKnown RBP5.45□□□□□ -1.54
CSMD3-203ENST00000343508 MYD88Q99836 296 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 SWAP70Q9UH65 585 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 A0A087WZG4 1122 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 ALDH1L1O75891 902 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 RBM6P78332 1123 aaKnown RBP5.45□□□□□ -1.54
CSMD3-203ENST00000343508 CDC37L1Q7L3B6 337 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 CCDC43Q96MW1 224 aaKnown RBP5.45□□□□□ -1.54
CSMD3-203ENST00000343508 SPTLC3Q9NUV7 552 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 GLI2P10070 1586 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 TMEM67Q5HYA8 995 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 SOGA3Q5TF21 947 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 TMEM87AQ8NBN3 555 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 RPGRIP1Q96KN7 1286 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 ATP7BP35670 1465 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 HLTFQ14527 1009 aaKnown RBP eCLIP5.45□□□□□ -1.54
CSMD3-203ENST00000343508 ADALQ6DHV7 355 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 CCDC50Q8IVM0 306 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 LZTFL1Q9NQ48 299 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 PHLPP2Q6ZVD8 1323 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 ARHGAP31Q2M1Z3 1444 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 OAS2P29728 719 aaKnown RBP5.45□□□□□ -1.54
CSMD3-203ENST00000343508 LRP2BPQ9P2M1 347 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 CYP26C1Q6V0L0 522 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 GBP6Q6ZN66 633 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 FCHSD1Q86WN1 690 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 PAG1Q9NWQ8 432 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 BCCIPQ9P287 314 aaKnown RBP eCLIP5.45□□□□□ -1.54
CSMD3-203ENST00000343508 ARHGAP25P42331 645 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 ME3Q16798 604 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 TCP11L1Q9NUJ3 509 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 MAP2P11137 1827 aaKnown RBP5.45□□□□□ -1.54
CSMD3-203ENST00000343508 ZNF202O95125 648 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 NLRP12P59046 1061 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 ZNF569Q5MCW4 686 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 CATIPQ7Z7H3 387 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 KIAA1468Q9P260 1216 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 ASXL2Q76L83 1435 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 KIF20BQ96Q89 1820 aa5.45□□□□□ -1.54
CSMD3-203ENST00000343508 IFIT5Q13325 482 aaKnown RBP5.44□□□□□ -1.54
CSMD3-203ENST00000343508 KSR2Q6VAB6 950 aa5.44□□□□□ -1.54
CSMD3-203ENST00000343508 DDX46Q7L014 1031 aaKnown RBP5.44□□□□□ -1.54
CSMD3-203ENST00000343508 KRT23Q9C075 422 aa5.44□□□□□ -1.54
CSMD3-203ENST00000343508 ZSWIM6Q9HCJ5 1215 aa5.44□□□□□ -1.54
CSMD3-203ENST00000343508 ZCCHC11Q5TAX3 1644 aaKnown RBP5.44□□□□□ -1.54
CSMD3-203ENST00000343508 KLF18A0A0U1RQI7 1052 aa5.44□□□□□ -1.54
CSMD3-203ENST00000343508 VAV2P52735 878 aa5.44□□□□□ -1.54
CSMD3-203ENST00000343508 STAP2Q9UGK3 403 aa5.44□□□□□ -1.54
CSMD3-203ENST00000343508 PUF60Q9UHX1 559 aaKnown RBP5.44□□□□□ -1.54
CSMD3-203ENST00000343508 IL13P35225 146 aa5.44□□□□□ -1.54
CSMD3-203ENST00000343508 MFSD6Q6ZSS7 791 aa5.44□□□□□ -1.54
CSMD3-203ENST00000343508 IPO4Q8TEX9 1081 aaKnown RBP5.44□□□□□ -1.54
CSMD3-203ENST00000343508 PLCD4Q9BRC7 762 aa5.44□□□□□ -1.54
CSMD3-203ENST00000343508 ABCA6Q8N139 1617 aa5.44□□□□□ -1.54
CSMD3-203ENST00000343508 WDHD1O75717 1129 aaPredicted RBP5.44□□□□□ -1.54
CSMD3-203ENST00000343508 METTL24Q5JXM2 366 aa5.44□□□□□ -1.54
CSMD3-203ENST00000343508 ZFYVE27Q5T4F4 411 aa5.44□□□□□ -1.54
CSMD3-203ENST00000343508 MLKLQ8NB16 471 aa5.44□□□□□ -1.54
CSMD3-203ENST00000343508 SELENOOQ9BVL4 669 aa5.44□□□□□ -1.54
CSMD3-203ENST00000343508 MRVI1Q9Y6F6 885 aa5.44□□□□□ -1.54
CSMD3-203ENST00000343508 PNMA6EA0A0J9YXQ4 647 aa5.44□□□□□ -1.54
CSMD3-203ENST00000343508 ZBTB43O43298 467 aa5.44□□□□□ -1.54
CSMD3-203ENST00000343508 NEFHP12036 1026 aa5.44□□□□□ -1.54
CSMD3-203ENST00000343508 MICU3Q86XE3 530 aa5.44□□□□□ -1.54
CSMD3-203ENST00000343508 FAM69CQ0P6D2 419 aa5.44□□□□□ -1.54
CSMD3-203ENST00000343508 OTUD7AQ8TE49 926 aaPredicted RBP5.44□□□□□ -1.54
CSMD3-203ENST00000343508 NAPGQ99747 312 aaPredicted RBP5.44□□□□□ -1.54
CSMD3-203ENST00000343508 STMN4Q9H169 189 aaPredicted RBP5.44□□□□□ -1.54
CSMD3-203ENST00000343508 ZNF215Q9UL58 517 aaPredicted RBP5.44□□□□□ -1.54
CSMD3-203ENST00000343508 CHL1O00533 1208 aa5.44□□□□□ -1.54
CSMD3-203ENST00000343508 PPP1R2P41236 205 aa5.44□□□□□ -1.54
CSMD3-203ENST00000343508 TERF2Q15554 542 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms