RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 BEGAINQ9BUH8 593 aa23.3■■□□□ 1.32
CDHR4-201ENST00000343366 ADARB2Q9NS39 739 aaKnown RBP23.3■■□□□ 1.32
CDHR4-201ENST00000343366 PPEF1O14829 653 aaPredicted RBP23.29■■□□□ 1.32
CDHR4-201ENST00000343366 TAF7LQ5H9L4 462 aa23.29■■□□□ 1.32
CDHR4-201ENST00000343366 MPHOSPH8Q99549 860 aa23.29■■□□□ 1.32
CDHR4-201ENST00000343366 VPS33BQ9H267 617 aa23.29■■□□□ 1.32
CDHR4-201ENST00000343366 FBXO3Q9UK99 471 aa23.29■■□□□ 1.32
CDHR4-201ENST00000343366 CA12O43570 354 aa23.28■■□□□ 1.32
CDHR4-201ENST00000343366 RTFDC1Q9BY42 306 aaPredicted RBP23.28■■□□□ 1.32
CDHR4-201ENST00000343366 MCOLN1Q9GZU1 580 aa23.28■■□□□ 1.32
CDHR4-201ENST00000343366 BSDC1Q9NW68 430 aaPredicted RBP23.28■■□□□ 1.32
CDHR4-201ENST00000343366 PCDH10Q9P2E7 1040 aa23.28■■□□□ 1.32
CDHR4-201ENST00000343366 ATP8B2P98198 1209 aa23.27■■□□□ 1.32
CDHR4-201ENST00000343366 CXCL9Q07325 125 aa23.27■■□□□ 1.32
CDHR4-201ENST00000343366 PAXIP1Q6ZW49 1069 aaPredicted RBP23.27■■□□□ 1.32
CDHR4-201ENST00000343366 SP8Q8IXZ3 490 aa23.27■■□□□ 1.32
CDHR4-201ENST00000343366 NIM1KQ8IY84 436 aa23.27■■□□□ 1.32
CDHR4-201ENST00000343366 CCDC85AQ96PX6 553 aaPredicted RBP23.27■■□□□ 1.32
CDHR4-201ENST00000343366 SEC31BQ9NQW1 1179 aa23.27■■□□□ 1.32
CDHR4-201ENST00000343366 ATP6V0A2Q9Y487 856 aa23.27■■□□□ 1.32
CDHR4-201ENST00000343366 SRGAP3O43295 1099 aa23.26■■□□□ 1.31
CDHR4-201ENST00000343366 HMMRO75330 724 aa23.26■■□□□ 1.31
CDHR4-201ENST00000343366 CRBNQ96SW2 442 aa23.26■■□□□ 1.31
CDHR4-201ENST00000343366 DUOX1Q9NRD9 1551 aa23.26■■□□□ 1.31
CDHR4-201ENST00000343366 LRRC37AA6NMS7 1700 aa23.25■■□□□ 1.31
CDHR4-201ENST00000343366 PPIP5K2O43314 1243 aa23.25■■□□□ 1.31
CDHR4-201ENST00000343366 HIRAP54198 1017 aaPredicted RBP23.25■■□□□ 1.31
CDHR4-201ENST00000343366 GRM1Q13255 1194 aa23.25■■□□□ 1.31
CDHR4-201ENST00000343366 AOC3Q16853 763 aa23.25■■□□□ 1.31
CDHR4-201ENST00000343366 CELF1Q92879 486 aaKnown RBP23.25■■□□□ 1.31
CDHR4-201ENST00000343366 CELF2O95319 508 aaKnown RBP23.24■■□□□ 1.31
CDHR4-201ENST00000343366 GLIS2Q9BZE0 524 aaPredicted RBP23.24■■□□□ 1.31
CDHR4-201ENST00000343366 ZNRF3Q9ULT6 936 aa23.24■■□□□ 1.31
CDHR4-201ENST00000343366 TAF1P21675 1872 aa23.24■■□□□ 1.31
CDHR4-201ENST00000343366 CEP85Q6P2H3 762 aa23.23■■□□□ 1.31
CDHR4-201ENST00000343366 LDHAL6AQ6ZMR3 332 aa23.23■■□□□ 1.31
CDHR4-201ENST00000343366 SSH3Q8TE77 659 aa23.23■■□□□ 1.31
CDHR4-201ENST00000343366 ZC3H15Q8WU90 426 aaKnown RBP23.23■■□□□ 1.31
CDHR4-201ENST00000343366 NEFLP07196 543 aa23.22■■□□□ 1.31
CDHR4-201ENST00000343366 GMPSP49915 693 aaPredicted RBP23.22■■□□□ 1.31
CDHR4-201ENST00000343366 ANKRD2Q9GZV1 360 aa23.22■■□□□ 1.31
CDHR4-201ENST00000343366 COPRSQ9NQ92 184 aa23.22■■□□□ 1.31
CDHR4-201ENST00000343366 CIAO1O76071 339 aa23.21■■□□□ 1.31
CDHR4-201ENST00000343366 POLA2Q14181 598 aa23.21■■□□□ 1.31
CDHR4-201ENST00000343366 ZIC5Q96T25 663 aa23.21■■□□□ 1.31
CDHR4-201ENST00000343366 C1orf115Q9H7X2 142 aa23.21■■□□□ 1.31
CDHR4-201ENST00000343366 CNNM1Q9NRU3 951 aa23.21■■□□□ 1.31
CDHR4-201ENST00000343366 SPEF2Q9C093 1822 aa23.21■■□□□ 1.31
CDHR4-201ENST00000343366 POLR2AP24928 1970 aaKnown RBP23.21■■□□□ 1.31
CDHR4-201ENST00000343366 MROH5Q6ZUA9 1318 aa23.2■■□□□ 1.3
CDHR4-201ENST00000343366 RFX5P48382 616 aaPredicted RBP23.2■■□□□ 1.3
CDHR4-201ENST00000343366 PTPN12Q05209 780 aaKnown RBP23.2■■□□□ 1.3
CDHR4-201ENST00000343366 SUPT20HQ8NEM7 779 aa23.2■■□□□ 1.3
CDHR4-201ENST00000343366 KIAA2012Q0VF49 1180 aa23.19■■□□□ 1.3
CDHR4-201ENST00000343366 HSP90AB4PQ58FF6 505 aa23.19■■□□□ 1.3
CDHR4-201ENST00000343366 CIAPIN1Q6FI81 312 aa23.19■■□□□ 1.3
CDHR4-201ENST00000343366 TRPM4Q8TD43 1214 aa23.19■■□□□ 1.3
CDHR4-201ENST00000343366 PODXL2Q9NZ53 605 aa23.19■■□□□ 1.3
CDHR4-201ENST00000343366 PNMA6EA0A0J9YXQ4 647 aa23.18■■□□□ 1.3
CDHR4-201ENST00000343366 MPNDQ8N594 471 aa23.18■■□□□ 1.3
CDHR4-201ENST00000343366 MINPP1Q9UNW1 487 aa23.18■■□□□ 1.3
CDHR4-201ENST00000343366 XDHP47989 1333 aa23.17■■□□□ 1.3
CDHR4-201ENST00000343366 EYA2O00167 538 aa23.17■■□□□ 1.3
CDHR4-201ENST00000343366 IL15P40933 162 aaPredicted RBP23.17■■□□□ 1.3
CDHR4-201ENST00000343366 ANKIB1Q9P2G1 1089 aa23.17■■□□□ 1.3
CDHR4-201ENST00000343366 SHTN1A0MZ66 631 aa23.16■■□□□ 1.3
CDHR4-201ENST00000343366 YDJCA8MPS7 323 aa23.16■■□□□ 1.3
CDHR4-201ENST00000343366 G3BP1Q13283 466 aaKnown RBP eCLIP23.16■■□□□ 1.3
CDHR4-201ENST00000343366 DGKZQ13574 1117 aa23.16■■□□□ 1.3
CDHR4-201ENST00000343366 DPP8Q6V1X1 898 aaPredicted RBP23.16■■□□□ 1.3
CDHR4-201ENST00000343366 CDC37L1Q7L3B6 337 aa23.16■■□□□ 1.3
CDHR4-201ENST00000343366 EXOC6Q8TAG9 804 aa23.16■■□□□ 1.3
CDHR4-201ENST00000343366 ZNF594Q96JF6 807 aaPredicted RBP23.16■■□□□ 1.3
CDHR4-201ENST00000343366 LEMD3Q9Y2U8 911 aa23.16■■□□□ 1.3
CDHR4-201ENST00000343366 RIPOR2Q9Y4F9 1068 aa23.16■■□□□ 1.3
CDHR4-201ENST00000343366 FAM155AB1AL88 458 aaPredicted RBP23.15■■□□□ 1.3
CDHR4-201ENST00000343366 NOGQ13253 232 aa23.15■■□□□ 1.3
CDHR4-201ENST00000343366 NSFL1CQ9UNZ2 370 aaKnown RBP23.15■■□□□ 1.3
CDHR4-201ENST00000343366 NOP58Q9Y2X3 529 aaKnown RBP23.15■■□□□ 1.3
CDHR4-201ENST00000343366 ATP2B4P23634 1241 aa23.14■■□□□ 1.29
CDHR4-201ENST00000343366 CHRNDQ07001 517 aa23.14■■□□□ 1.29
CDHR4-201ENST00000343366 ERC1Q8IUD2 1116 aa23.14■■□□□ 1.29
CDHR4-201ENST00000343366 EYA3Q99504 573 aa23.14■■□□□ 1.29
CDHR4-201ENST00000343366 RAD17O75943 681 aa23.13■■□□□ 1.29
CDHR4-201ENST00000343366 ERICH6BQ5W0A0 696 aa23.13■■□□□ 1.29
CDHR4-201ENST00000343366 GGA1Q9UJY5 639 aa23.13■■□□□ 1.29
CDHR4-201ENST00000343366 AKAP11Q9UKA4 1901 aa23.13■■□□□ 1.29
CDHR4-201ENST00000343366 COL4A1P02462 1669 aa23.13■■□□□ 1.29
CDHR4-201ENST00000343366 SURF6O75683 361 aaKnown RBP23.12■■□□□ 1.29
CDHR4-201ENST00000343366 METTL24Q5JXM2 366 aa23.12■■□□□ 1.29
CDHR4-201ENST00000343366 DLK2Q6UY11 383 aa23.12■■□□□ 1.29
CDHR4-201ENST00000343366 CEP126Q9P2H0 1117 aa23.12■■□□□ 1.29
CDHR4-201ENST00000343366 CNOT7Q9UIV1 285 aaKnown RBP23.12■■□□□ 1.29
CDHR4-201ENST00000343366 RAB11FIP3O75154 756 aa23.11■■□□□ 1.29
CDHR4-201ENST00000343366 UBE4AQ14139 1066 aa23.11■■□□□ 1.29
CDHR4-201ENST00000343366 TNIP1Q15025 636 aa23.11■■□□□ 1.29
CDHR4-201ENST00000343366 KLHDC4Q8TBB5 520 aa23.11■■□□□ 1.29
CDHR4-201ENST00000343366 SIL1Q9H173 461 aa23.11■■□□□ 1.29
CDHR4-201ENST00000343366 RWDD1Q9H446 243 aaPredicted RBP23.11■■□□□ 1.29
CDHR4-201ENST00000343366 A0A1B0GUL6 1792 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms