RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 TSNARE1Q96NA8 513 aa17.11■□□□□ 0.33
UBE3B-202ENST00000342494 PLVAPQ9BX97 442 aa17.11■□□□□ 0.33
UBE3B-202ENST00000342494 GPATCH8Q9UKJ3 1502 aaKnown RBP17.11■□□□□ 0.33
UBE3B-202ENST00000342494 KRT79Q5XKE5 535 aa17.1■□□□□ 0.33
UBE3B-202ENST00000342494 SHTN1A0MZ66 631 aa17.1■□□□□ 0.33
UBE3B-202ENST00000342494 GRIPAP1Q4V328 841 aa17.1■□□□□ 0.33
UBE3B-202ENST00000342494 MRPL50Q8N5N7 158 aaKnown RBP17.1■□□□□ 0.33
UBE3B-202ENST00000342494 SH2D4AQ9H788 454 aa17.1■□□□□ 0.33
UBE3B-202ENST00000342494 IL27Q8NEV9 243 aa17.1■□□□□ 0.33
UBE3B-202ENST00000342494 INCENPQ9NQS7 918 aa17.1■□□□□ 0.33
UBE3B-202ENST00000342494 NMIQ13287 307 aaPredicted RBP17.09■□□□□ 0.33
UBE3B-202ENST00000342494 HDAC1Q13547 482 aaPredicted RBP17.09■□□□□ 0.33
UBE3B-202ENST00000342494 MRVI1Q9Y6F6 885 aa17.09■□□□□ 0.33
UBE3B-202ENST00000342494 FAM212AQ96EL1 285 aa17.09■□□□□ 0.33
UBE3B-202ENST00000342494 JADE2Q9NQC1 790 aa17.09■□□□□ 0.33
UBE3B-202ENST00000342494 PSMA7O14818 248 aa17.09■□□□□ 0.33
UBE3B-202ENST00000342494 TMX3Q96JJ7 454 aa17.09■□□□□ 0.33
UBE3B-202ENST00000342494 EYA1Q99502 592 aa17.09■□□□□ 0.33
UBE3B-202ENST00000342494 TRIM75PA6NK02 468 aa17.09■□□□□ 0.33
UBE3B-202ENST00000342494 BACH1O14867 736 aa17.09■□□□□ 0.33
UBE3B-202ENST00000342494 RNMTO43148 476 aaKnown RBP17.08■□□□□ 0.33
UBE3B-202ENST00000342494 UFL1O94874 794 aa17.08■□□□□ 0.33
UBE3B-202ENST00000342494 FAM13AO94988 1023 aa17.08■□□□□ 0.33
UBE3B-202ENST00000342494 CAVIN2O95810 425 aa17.08■□□□□ 0.33
UBE3B-202ENST00000342494 PLCD3Q8N3E9 789 aa17.08■□□□□ 0.33
UBE3B-202ENST00000342494 ESYT1Q9BSJ8 1104 aa17.08■□□□□ 0.33
UBE3B-202ENST00000342494 DUOX2Q9NRD8 1548 aa17.08■□□□□ 0.33
UBE3B-202ENST00000342494 ZSCAN22P10073 491 aaPredicted RBP17.08■□□□□ 0.33
UBE3B-202ENST00000342494 PDCL2Q8N4E4 241 aa17.08■□□□□ 0.33
UBE3B-202ENST00000342494 MAP3K1Q13233 1512 aa17.08■□□□□ 0.32
UBE3B-202ENST00000342494 GOLGA6L9A6NEM1 432 aa17.08■□□□□ 0.32
UBE3B-202ENST00000342494 IGHDP01880 384 aa17.08■□□□□ 0.32
UBE3B-202ENST00000342494 SP4Q02446 784 aa17.08■□□□□ 0.32
UBE3B-202ENST00000342494 TFCP2Q12800 502 aa17.08■□□□□ 0.32
UBE3B-202ENST00000342494 ZBTB21Q9ULJ3 1066 aa17.08■□□□□ 0.32
UBE3B-202ENST00000342494 IKBKGQ9Y6K9 419 aa17.08■□□□□ 0.32
UBE3B-202ENST00000342494 KIAA0753Q2KHM9 967 aa17.08■□□□□ 0.32
UBE3B-202ENST00000342494 IP6K1Q92551 441 aa17.08■□□□□ 0.32
UBE3B-202ENST00000342494 NPATQ14207 1427 aa17.08■□□□□ 0.32
UBE3B-202ENST00000342494 GNA11P29992 359 aa17.08■□□□□ 0.32
UBE3B-202ENST00000342494 DENND2AQ9ULE3 1009 aa17.08■□□□□ 0.32
UBE3B-202ENST00000342494 HOXC9P31274 260 aa17.07■□□□□ 0.32
UBE3B-202ENST00000342494 RGS22Q8NE09 1264 aa17.07■□□□□ 0.32
UBE3B-202ENST00000342494 ZNF408Q9H9D4 720 aa17.07■□□□□ 0.32
UBE3B-202ENST00000342494 TAF12Q16514 161 aa17.07■□□□□ 0.32
UBE3B-202ENST00000342494 SPAG1Q07617 926 aa17.07■□□□□ 0.32
UBE3B-202ENST00000342494 LRSAM1Q6UWE0 723 aa17.07■□□□□ 0.32
UBE3B-202ENST00000342494 DPH6Q7L8W6 267 aa17.07■□□□□ 0.32
UBE3B-202ENST00000342494 EHBP1Q8NDI1 1231 aa17.07■□□□□ 0.32
UBE3B-202ENST00000342494 CTAGE1Q96RT6 745 aa17.07■□□□□ 0.32
UBE3B-202ENST00000342494 PICK1Q9NRD5 415 aa17.07■□□□□ 0.32
UBE3B-202ENST00000342494 MARCKSP29966 332 aaPredicted RBP17.07■□□□□ 0.32
UBE3B-202ENST00000342494 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.07■□□□□ 0.32
UBE3B-202ENST00000342494 THOC2Q8NI27 1593 aaKnown RBP17.07■□□□□ 0.32
UBE3B-202ENST00000342494 TTC41PQ6P2S7 1318 aa17.07■□□□□ 0.32
UBE3B-202ENST00000342494 PARP10Q53GL7 1025 aa17.06■□□□□ 0.32
UBE3B-202ENST00000342494 GIGYF2Q6Y7W6 1299 aaKnown RBP17.06■□□□□ 0.32
UBE3B-202ENST00000342494 TEX11Q8IYF3 940 aa17.06■□□□□ 0.32
UBE3B-202ENST00000342494 RAB3GAP1Q15042 981 aa17.06■□□□□ 0.32
UBE3B-202ENST00000342494 MRPS27Q92552 414 aaKnown RBP17.06■□□□□ 0.32
UBE3B-202ENST00000342494 TRPM2O94759 1503 aa17.06■□□□□ 0.32
UBE3B-202ENST00000342494 HS2ST1Q7LGA3 356 aa17.06■□□□□ 0.32
UBE3B-202ENST00000342494 KIF4AO95239 1232 aa17.05■□□□□ 0.32
UBE3B-202ENST00000342494 C16orf45Q96MC5 204 aaPredicted RBP17.05■□□□□ 0.32
UBE3B-202ENST00000342494 KRT2P35908 639 aa17.05■□□□□ 0.32
UBE3B-202ENST00000342494 ASXL1Q8IXJ9 1541 aa17.05■□□□□ 0.32
UBE3B-202ENST00000342494 DHX58Q96C10 678 aa17.05■□□□□ 0.32
UBE3B-202ENST00000342494 TMOD4Q9NZQ9 345 aa17.05■□□□□ 0.32
UBE3B-202ENST00000342494 UBASH3AP57075 661 aa17.05■□□□□ 0.32
UBE3B-202ENST00000342494 FERP16591 822 aa17.04■□□□□ 0.32
UBE3B-202ENST00000342494 CYLC1P35663 651 aaPredicted RBP17.04■□□□□ 0.32
UBE3B-202ENST00000342494 MRPS9P82933 396 aaKnown RBP17.04■□□□□ 0.32
UBE3B-202ENST00000342494 ZMYM3Q14202 1370 aa17.04■□□□□ 0.32
UBE3B-202ENST00000342494 FAM89AQ96GI7 184 aa17.04■□□□□ 0.32
UBE3B-202ENST00000342494 ATP10BO94823 1461 aa17.04■□□□□ 0.32
UBE3B-202ENST00000342494 POTEB2H3BUK9 544 aa17.04■□□□□ 0.32
UBE3B-202ENST00000342494 ADCY5O95622 1261 aa17.04■□□□□ 0.32
UBE3B-202ENST00000342494 PARP1P09874 1014 aaKnown RBP17.04■□□□□ 0.32
UBE3B-202ENST00000342494 CHST3Q7LGC8 479 aa17.04■□□□□ 0.32
UBE3B-202ENST00000342494 TTC12Q9H892 705 aaPredicted RBP17.04■□□□□ 0.32
UBE3B-202ENST00000342494 TBX22Q9Y458 520 aa17.04■□□□□ 0.32
UBE3B-202ENST00000342494 SH3TC1Q8TE82 1336 aa17.04■□□□□ 0.32
UBE3B-202ENST00000342494 EIF6P56537 245 aaKnown RBP17.04■□□□□ 0.32
UBE3B-202ENST00000342494 SAP30BPQ9UHR5 308 aaKnown RBP17.04■□□□□ 0.32
UBE3B-202ENST00000342494 NOD1Q9Y239 953 aa17.04■□□□□ 0.32
UBE3B-202ENST00000342494 WDR70Q9NW82 654 aa17.03■□□□□ 0.32
UBE3B-202ENST00000342494 GGA1Q9UJY5 639 aa17.03■□□□□ 0.32
UBE3B-202ENST00000342494 HSP90AA4PQ58FG1 418 aa17.03■□□□□ 0.32
UBE3B-202ENST00000342494 PPP1R14CQ8TAE6 165 aa17.03■□□□□ 0.32
UBE3B-202ENST00000342494 HIBADHP31937 336 aaKnown RBP17.03■□□□□ 0.32
UBE3B-202ENST00000342494 MAATS1Q7Z4T9 603 aa17.03■□□□□ 0.32
UBE3B-202ENST00000342494 BICC1Q9H694 974 aaKnown RBP17.03■□□□□ 0.32
UBE3B-202ENST00000342494 DDX21Q9NR30 783 aaKnown RBP eCLIP17.03■□□□□ 0.32
UBE3B-202ENST00000342494 CCDC175P0C221 793 aa17.03■□□□□ 0.32
UBE3B-202ENST00000342494 SNW1Q13573 536 aaKnown RBP17.03■□□□□ 0.32
UBE3B-202ENST00000342494 DDX12PQ92771 950 aa17.03■□□□□ 0.32
UBE3B-202ENST00000342494 ABCC1P33527 1531 aa17.03■□□□□ 0.32
UBE3B-202ENST00000342494 H0YIN7 160 aa17.02■□□□□ 0.32
UBE3B-202ENST00000342494 MBD4O95243 580 aa17.02■□□□□ 0.32
UBE3B-202ENST00000342494 FAM98CQ17RN3 349 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms