RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 TMED8Q6PL24 325 aaPredicted RBP8.84□□□□□ -0.99
HIPK1-201ENST00000340480 TRIM5Q9C035 493 aa8.84□□□□□ -0.99
HIPK1-201ENST00000340480 ANO10Q9NW15 660 aa8.84□□□□□ -0.99
HIPK1-201ENST00000340480 MST1RQ04912 1400 aa8.84□□□□□ -0.99
HIPK1-201ENST00000340480 SMTNL1A8MU46 457 aa8.84□□□□□ -0.99
HIPK1-201ENST00000340480 KIF5BP33176 963 aa8.84□□□□□ -0.99
HIPK1-201ENST00000340480 PPP2R5BQ15173 497 aa8.84□□□□□ -0.99
HIPK1-201ENST00000340480 LRSAM1Q6UWE0 723 aa8.84□□□□□ -0.99
HIPK1-201ENST00000340480 DDX11Q96FC9 970 aa8.84□□□□□ -0.99
HIPK1-201ENST00000340480 FAM89AQ96GI7 184 aa8.84□□□□□ -0.99
HIPK1-201ENST00000340480 ORC3Q9UBD5 711 aaPredicted RBP8.84□□□□□ -0.99
HIPK1-201ENST00000340480 DENND2AQ9ULE3 1009 aa8.84□□□□□ -0.99
HIPK1-201ENST00000340480 SYCE3A1L190 88 aa8.84□□□□□ -0.99
HIPK1-201ENST00000340480 H7C1W4 665 aa8.84□□□□□ -0.99
HIPK1-201ENST00000340480 CALM1P0DP23 149 aa8.84□□□□□ -0.99
HIPK1-201ENST00000340480 CALM2P0DP24 149 aa8.84□□□□□ -0.99
HIPK1-201ENST00000340480 CALM3P0DP25 149 aa8.84□□□□□ -0.99
HIPK1-201ENST00000340480 CATIPQ7Z7H3 387 aa8.84□□□□□ -0.99
HIPK1-201ENST00000340480 FERMT3Q86UX7 667 aa8.84□□□□□ -0.99
HIPK1-201ENST00000340480 ZSCAN30Q86W11 494 aa8.84□□□□□ -0.99
HIPK1-201ENST00000340480 TMEM87BQ96K49 555 aa8.84□□□□□ -0.99
HIPK1-201ENST00000340480 MON2Q7Z3U7 1717 aa8.83□□□□□ -1
HIPK1-201ENST00000340480 CBFA2T2O43439 604 aa8.83□□□□□ -1
HIPK1-201ENST00000340480 PRIM1P49642 420 aaKnown RBP8.83□□□□□ -1
HIPK1-201ENST00000340480 METAP2P50579 478 aaKnown RBP eCLIP8.83□□□□□ -12e-7■■■□□ 17.1
HIPK1-201ENST00000340480 XAGE2Q96GT9 111 aa8.83□□□□□ -1
HIPK1-201ENST00000340480 C3P01024 1663 aa8.83□□□□□ -1
HIPK1-201ENST00000340480 SOS2Q07890 1332 aaPredicted RBP8.83□□□□□ -1
HIPK1-201ENST00000340480 USP42Q9H9J4 1324 aaKnown RBP8.83□□□□□ -1
HIPK1-201ENST00000340480 MAP2P11137 1827 aaKnown RBP8.83□□□□□ -1
HIPK1-201ENST00000340480 ABCC12Q96J65 1359 aa8.83□□□□□ -1
HIPK1-201ENST00000340480 NT5C2P49902 561 aa8.83□□□□□ -1
HIPK1-201ENST00000340480 TMEM67Q5HYA8 995 aa8.83□□□□□ -1
HIPK1-201ENST00000340480 KCNG4Q8TDN1 519 aa8.83□□□□□ -1
HIPK1-201ENST00000340480 RTL9Q8NET4 1388 aa8.83□□□□□ -1
HIPK1-201ENST00000340480 ESPNB1AK53 854 aa8.83□□□□□ -1
HIPK1-201ENST00000340480 MPHOSPH10O00566 681 aaKnown RBP8.83□□□□□ -1
HIPK1-201ENST00000340480 FOSBP53539 338 aa8.83□□□□□ -1
HIPK1-201ENST00000340480 SSRP1Q08945 709 aaKnown RBP8.83□□□□□ -1
HIPK1-201ENST00000340480 ZFYVE27Q5T4F4 411 aa8.83□□□□□ -1
HIPK1-201ENST00000340480 SOGA3Q5TF21 947 aa8.83□□□□□ -1
HIPK1-201ENST00000340480 Q6ZUG5 572 aa8.83□□□□□ -1
HIPK1-201ENST00000340480 BRAPQ7Z569 592 aa8.83□□□□□ -1
HIPK1-201ENST00000340480 NUP133Q8WUM0 1156 aa8.83□□□□□ -1
HIPK1-201ENST00000340480 TMOD2Q9NZR1 351 aa8.83□□□□□ -1
HIPK1-201ENST00000340480 ANKIB1Q9P2G1 1089 aa8.83□□□□□ -1
HIPK1-201ENST00000340480 PLCG2P16885 1265 aa8.83□□□□□ -1
HIPK1-201ENST00000340480 CTSWP56202 376 aa8.83□□□□□ -1
HIPK1-201ENST00000340480 ADCY9O60503 1353 aa8.83□□□□□ -1
HIPK1-201ENST00000340480 KLF18A0A0U1RQI7 1052 aa8.83□□□□□ -1
HIPK1-201ENST00000340480 ZBTB43O43298 467 aa8.83□□□□□ -1
HIPK1-201ENST00000340480 BRD1O95696 1058 aa8.83□□□□□ -1
HIPK1-201ENST00000340480 TNNT3P45378 269 aaPredicted RBP8.83□□□□□ -1
HIPK1-201ENST00000340480 GNAQP50148 359 aa8.83□□□□□ -1
HIPK1-201ENST00000340480 C8orf37Q96NL8 207 aa8.83□□□□□ -1
HIPK1-201ENST00000340480 HS1BP3Q53T59 392 aa8.82□□□□□ -1
HIPK1-201ENST00000340480 MAP4K1Q92918 833 aa8.82□□□□□ -1
HIPK1-201ENST00000340480 CDHR2Q9BYE9 1310 aa8.82□□□□□ -1
HIPK1-201ENST00000340480 PRC1O43663 620 aa8.82□□□□□ -1
HIPK1-201ENST00000340480 OFD1O75665 1012 aa8.82□□□□□ -1
HIPK1-201ENST00000340480 DESP17661 470 aa8.82□□□□□ -1
HIPK1-201ENST00000340480 USP5P45974 858 aa8.82□□□□□ -1
HIPK1-201ENST00000340480 SYT1P21579 422 aa8.82□□□□□ -1
HIPK1-201ENST00000340480 CUL4AQ13619 759 aa8.82□□□□□ -1
HIPK1-201ENST00000340480 CCDC12Q8WUD4 166 aaPredicted RBP8.82□□□□□ -1
HIPK1-201ENST00000340480 ZSWIM6Q9HCJ5 1215 aa8.82□□□□□ -1
HIPK1-201ENST00000340480 TTLL7Q6ZT98 887 aa8.82□□□□□ -1
HIPK1-201ENST00000340480 ACSBG1Q96GR2 724 aa8.82□□□□□ -1
HIPK1-201ENST00000340480 LSG1Q9H089 658 aaKnown RBP8.82□□□□□ -1
HIPK1-201ENST00000340480 MYO6Q9UM54 1294 aa8.82□□□□□ -1
HIPK1-201ENST00000340480 SMC2O95347 1197 aa8.81□□□□□ -1
HIPK1-201ENST00000340480 WTAPQ15007 396 aa8.81□□□□□ -1
HIPK1-201ENST00000340480 NKX1-1Q15270 411 aaPredicted RBP8.81□□□□□ -1
HIPK1-201ENST00000340480 NAA16Q6N069 864 aaPredicted RBP8.81□□□□□ -1
HIPK1-201ENST00000340480 ZNF804AQ7Z570 1209 aa8.81□□□□□ -1
HIPK1-201ENST00000340480 IGSF3O75054 1194 aa8.81□□□□□ -1
HIPK1-201ENST00000340480 CYP7A1P22680 504 aa8.81□□□□□ -1
HIPK1-201ENST00000340480 ZSCAN23Q3MJ62 389 aa8.81□□□□□ -1
HIPK1-201ENST00000340480 BRPF3Q9ULD4 1205 aa8.81□□□□□ -1
HIPK1-201ENST00000340480 TIMM10P62072 90 aa8.81□□□□□ -1
HIPK1-201ENST00000340480 TMEM87AQ8NBN3 555 aa8.81□□□□□ -1
HIPK1-201ENST00000340480 PI4K2BQ8TCG2 481 aa8.81□□□□□ -1
HIPK1-201ENST00000340480 KIF13AQ9H1H9 1805 aa8.81□□□□□ -1
HIPK1-201ENST00000340480 MINDY4BA8MYZ0 360 aa8.81□□□□□ -1
HIPK1-201ENST00000340480 FILIP1LQ4L180 1135 aa8.81□□□□□ -1
HIPK1-201ENST00000340480 PAXIP1Q6ZW49 1069 aaPredicted RBP8.81□□□□□ -1
HIPK1-201ENST00000340480 MTERF4Q7Z6M4 381 aaKnown RBP8.81□□□□□ -1
HIPK1-201ENST00000340480 ANTXR1Q9H6X2 564 aa8.81□□□□□ -1
HIPK1-201ENST00000340480 UTYO14607 1347 aa8.81□□□□□ -1
HIPK1-201ENST00000340480 NEMFO60524 1076 aa8.81□□□□□ -1
HIPK1-201ENST00000340480 IGKV5-2P06315 115 aa8.81□□□□□ -1
HIPK1-201ENST00000340480 KANK3Q6NY19 840 aa8.81□□□□□ -1
HIPK1-201ENST00000340480 PTPN12Q05209 780 aaKnown RBP8.81□□□□□ -1
HIPK1-201ENST00000340480 UBE3CQ15386 1083 aa8.81□□□□□ -1
HIPK1-201ENST00000340480 RABL6Q3YEC7 729 aaPredicted RBP8.81□□□□□ -1
HIPK1-201ENST00000340480 KLHDC4Q8TBB5 520 aa8.81□□□□□ -1
HIPK1-201ENST00000340480 CDK5RAP3Q96JB5 506 aa8.81□□□□□ -1
HIPK1-201ENST00000340480 MKNK2Q9HBH9 465 aa8.81□□□□□ -1
HIPK1-201ENST00000340480 SYCP1Q15431 976 aa8.8□□□□□ -1
HIPK1-201ENST00000340480 FAM227BQ96M60 508 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms