RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 SOGA3Q5TF21 947 aa18.06■□□□□ 0.48
CSRP1-201ENST00000340006 PLEKHM2Q8IWE5 1019 aa18.06■□□□□ 0.48
CSRP1-201ENST00000340006 RTKN2Q8IZC4 609 aa18.06■□□□□ 0.48
CSRP1-201ENST00000340006 TBC1D16Q8TBP0 767 aa18.06■□□□□ 0.48
CSRP1-201ENST00000340006 POLLQ9UGP5 575 aa18.06■□□□□ 0.48
CSRP1-201ENST00000340006 KIAA1551Q9HCM1 1747 aa18.06■□□□□ 0.48
CSRP1-201ENST00000340006 GRIPAP1Q4V328 841 aa18.06■□□□□ 0.48
CSRP1-201ENST00000340006 CCDC93Q567U6 631 aa18.06■□□□□ 0.48
CSRP1-201ENST00000340006 DBNLQ9UJU6 430 aaKnown RBP18.06■□□□□ 0.48
CSRP1-201ENST00000340006 ZC3H12CQ9C0D7 883 aaKnown RBP18.05■□□□□ 0.48
CSRP1-201ENST00000340006 G3V3G9 751 aa18.04■□□□□ 0.48
CSRP1-201ENST00000340006 RIMBP2O15034 1052 aa18.04■□□□□ 0.48
CSRP1-201ENST00000340006 PDE1AP54750 535 aa18.04■□□□□ 0.48
CSRP1-201ENST00000340006 TTC39AQ5SRH9 613 aa18.04■□□□□ 0.48
CSRP1-201ENST00000340006 DCAF8Q5TAQ9 597 aa18.04■□□□□ 0.48
CSRP1-201ENST00000340006 TSHZ3Q63HK5 1081 aa18.04■□□□□ 0.48
CSRP1-201ENST00000340006 GPR101Q96P66 508 aaPredicted RBP18.04■□□□□ 0.48
CSRP1-201ENST00000340006 ECHDC1Q9NTX5 307 aa18.04■□□□□ 0.48
CSRP1-201ENST00000340006 ZNF609O15014 1411 aa18.04■□□□□ 0.48
CSRP1-201ENST00000340006 BRCA1P38398 1863 aaKnown RBP18.04■□□□□ 0.48
CSRP1-201ENST00000340006 GYG1P46976 350 aa18.04■□□□□ 0.48
CSRP1-201ENST00000340006 BCAMP50895 628 aa18.04■□□□□ 0.48
CSRP1-201ENST00000340006 WASHC4Q2M389 1173 aa18.04■□□□□ 0.48
CSRP1-201ENST00000340006 EYA3Q99504 573 aa18.04■□□□□ 0.48
CSRP1-201ENST00000340006 A0A1B0GUL6 1792 aa18.03■□□□□ 0.48
CSRP1-201ENST00000340006 ERC2O15083 957 aa18.03■□□□□ 0.48
CSRP1-201ENST00000340006 FRAT2O75474 233 aaPredicted RBP18.03■□□□□ 0.48
CSRP1-201ENST00000340006 HIBADHP31937 336 aaKnown RBP18.02■□□□□ 0.48
CSRP1-201ENST00000340006 CCDC102BQ68D86 513 aa18.02■□□□□ 0.48
CSRP1-201ENST00000340006 SUPT20HQ8NEM7 779 aa18.02■□□□□ 0.48
CSRP1-201ENST00000340006 GNL3LQ9NVN8 582 aaKnown RBP18.02■□□□□ 0.48
CSRP1-201ENST00000340006 TTC41PQ6P2S7 1318 aa18.02■□□□□ 0.48
CSRP1-201ENST00000340006 KLRK1P26718 216 aa18.02■□□□□ 0.47
CSRP1-201ENST00000340006 TXNRD3Q86VQ6 643 aa18.02■□□□□ 0.47
CSRP1-201ENST00000340006 FAM84BQ96KN1 310 aaPredicted RBP18.02■□□□□ 0.47
CSRP1-201ENST00000340006 STAP2Q9UGK3 403 aa18.02■□□□□ 0.47
CSRP1-201ENST00000340006 LRRC37AA6NMS7 1700 aa18.02■□□□□ 0.47
CSRP1-201ENST00000340006 BOLA2Q9H3K6 86 aa18.01■□□□□ 0.47
CSRP1-201ENST00000340006 PHKA1P46020 1223 aa18■□□□□ 0.47
CSRP1-201ENST00000340006 ZNF804AQ7Z570 1209 aa18■□□□□ 0.47
CSRP1-201ENST00000340006 IQSEC3Q9UPP2 1182 aaPredicted RBP18■□□□□ 0.47
CSRP1-201ENST00000340006 GLRX3O76003 335 aaKnown RBP18■□□□□ 0.47
CSRP1-201ENST00000340006 ARHGAP27Q6ZUM4 889 aa18■□□□□ 0.47
CSRP1-201ENST00000340006 OSBPL3Q9H4L5 887 aa18■□□□□ 0.47
CSRP1-201ENST00000340006 RTN4Q9NQC3 1192 aaKnown RBP18■□□□□ 0.47
CSRP1-201ENST00000340006 SALL3Q9BXA9 1300 aa18■□□□□ 0.47
CSRP1-201ENST00000340006 UQCRFS1P1P0C7P4 283 aa17.99■□□□□ 0.47
CSRP1-201ENST00000340006 ATP5JP18859 108 aa17.99■□□□□ 0.47
CSRP1-201ENST00000340006 FKBP4Q02790 459 aaKnown RBP eCLIP17.99■□□□□ 0.47
CSRP1-201ENST00000340006 FBXO33Q7Z6M2 555 aa17.99■□□□□ 0.47
CSRP1-201ENST00000340006 PSMD1Q99460 953 aa17.99■□□□□ 0.47
CSRP1-201ENST00000340006 RTFDC1Q9BY42 306 aaPredicted RBP17.99■□□□□ 0.47
CSRP1-201ENST00000340006 TRIM6-TRIM34B2RNG4 842 aa17.99■□□□□ 0.47
CSRP1-201ENST00000340006 MAP4K4O95819 1239 aaPredicted RBP17.99■□□□□ 0.47
CSRP1-201ENST00000340006 GPR162Q16538 588 aa17.99■□□□□ 0.47
CSRP1-201ENST00000340006 UTRNP46939 3433 aa17.98■□□□□ 0.47
CSRP1-201ENST00000340006 DOK7Q18PE1 504 aa17.98■□□□□ 0.47
CSRP1-201ENST00000340006 C15orf52Q6ZUT6 534 aaKnown RBP17.98■□□□□ 0.47
CSRP1-201ENST00000340006 DNAJC2Q99543 621 aaKnown RBP17.98■□□□□ 0.47
CSRP1-201ENST00000340006 TAOK3Q9H2K8 898 aa17.98■□□□□ 0.47
CSRP1-201ENST00000340006 SNRKQ9NRH2 765 aa17.98■□□□□ 0.47
CSRP1-201ENST00000340006 ZNF277Q9NRM2 450 aaPredicted RBP17.98■□□□□ 0.47
CSRP1-201ENST00000340006 PPIP5K2O43314 1243 aa17.97■□□□□ 0.47
CSRP1-201ENST00000340006 AOC3Q16853 763 aa17.97■□□□□ 0.47
CSRP1-201ENST00000340006 PI4K2BQ8TCG2 481 aa17.97■□□□□ 0.47
CSRP1-201ENST00000340006 RILPL2Q969X0 211 aa17.97■□□□□ 0.47
CSRP1-201ENST00000340006 MED23Q9ULK4 1368 aa17.97■□□□□ 0.47
CSRP1-201ENST00000340006 TTC22Q5TAA0 569 aa17.97■□□□□ 0.47
CSRP1-201ENST00000340006 CD209Q9NNX6 404 aa17.97■□□□□ 0.47
CSRP1-201ENST00000340006 AOX1Q06278 1338 aa17.97■□□□□ 0.47
CSRP1-201ENST00000340006 ARFGEF1Q9Y6D6 1849 aa17.96■□□□□ 0.47
CSRP1-201ENST00000340006 LARGE2Q8N3Y3 721 aa17.96■□□□□ 0.47
CSRP1-201ENST00000340006 COA1Q9GZY4 146 aa17.96■□□□□ 0.47
CSRP1-201ENST00000340006 NDUFB9Q9Y6M9 179 aa17.96■□□□□ 0.47
CSRP1-201ENST00000340006 LTBP1Q14766 1721 aa17.96■□□□□ 0.46
CSRP1-201ENST00000340006 ARAP2Q8WZ64 1704 aa17.96■□□□□ 0.46
CSRP1-201ENST00000340006 ARID4AP29374 1257 aaPredicted RBP17.95■□□□□ 0.46
CSRP1-201ENST00000340006 SPATA5Q8NB90 893 aa17.95■□□□□ 0.46
CSRP1-201ENST00000340006 ZNF512BQ96KM6 892 aaPredicted RBP17.95■□□□□ 0.46
CSRP1-201ENST00000340006 DBNDD1Q9H9R9 158 aa17.95■□□□□ 0.46
CSRP1-201ENST00000340006 IRS2Q9Y4H2 1338 aa17.95■□□□□ 0.46
CSRP1-201ENST00000340006 MCAMP43121 646 aa17.95■□□□□ 0.46
CSRP1-201ENST00000340006 KIAA2012Q0VF49 1180 aa17.95■□□□□ 0.46
CSRP1-201ENST00000340006 SCARF1Q14162 830 aa17.95■□□□□ 0.46
CSRP1-201ENST00000340006 HAUS7Q99871 368 aa17.95■□□□□ 0.46
CSRP1-201ENST00000340006 DENND2AQ9ULE3 1009 aa17.95■□□□□ 0.46
CSRP1-201ENST00000340006 CHD4Q14839 1912 aa17.94■□□□□ 0.46
CSRP1-201ENST00000340006 FER1L6Q2WGJ9 1857 aa17.94■□□□□ 0.46
CSRP1-201ENST00000340006 YBX3P16989 372 aaKnown RBP eCLIP17.94■□□□□ 0.46
CSRP1-201ENST00000340006 ZAP70P43403 619 aa17.94■□□□□ 0.46
CSRP1-201ENST00000340006 CHAF1AQ13111 956 aaPredicted RBP17.94■□□□□ 0.46
CSRP1-201ENST00000340006 RASGRF1Q13972 1273 aa17.94■□□□□ 0.46
CSRP1-201ENST00000340006 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.94■□□□□ 0.46
CSRP1-201ENST00000340006 FBXW7Q969H0 707 aa17.94■□□□□ 0.46
CSRP1-201ENST00000340006 VPS33BQ9H267 617 aa17.94■□□□□ 0.46
CSRP1-201ENST00000340006 HMG20BQ9P0W2 317 aa17.94■□□□□ 0.46
CSRP1-201ENST00000340006 DUOX1Q9NRD9 1551 aa17.94■□□□□ 0.46
CSRP1-201ENST00000340006 GOLIM4O00461 696 aa17.93■□□□□ 0.46
CSRP1-201ENST00000340006 IARSP41252 1262 aaKnown RBP17.93■□□□□ 0.46
CSRP1-201ENST00000340006 PI16Q6UXB8 463 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms