RNA–Protein interactions for RNA: ENST00000336803.1

CLDN2-201, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN2, Length 2,959 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-201ENST00000336803 CASZ1Q86V15 1759 aa10.97□□□□□ -0.65
CLDN2-201ENST00000336803 UBAP1LF5GYI3 381 aa10.96□□□□□ -0.65
CLDN2-201ENST00000336803 ZBTB22O15209 634 aa10.96□□□□□ -0.65
CLDN2-201ENST00000336803 KCNQ2O43526 872 aa10.96□□□□□ -0.65
CLDN2-201ENST00000336803 HMGB1P09429 215 aaKnown RBP10.96□□□□□ -0.65
CLDN2-201ENST00000336803 ARID4AP29374 1257 aaPredicted RBP10.96□□□□□ -0.65
CLDN2-201ENST00000336803 TMEM87AQ8NBN3 555 aa10.96□□□□□ -0.65
CLDN2-201ENST00000336803 GZF1Q9H116 711 aaPredicted RBP10.96□□□□□ -0.65
CLDN2-201ENST00000336803 RRAGDQ9NQL2 400 aaPredicted RBP10.96□□□□□ -0.65
CLDN2-201ENST00000336803 SMC3Q9UQE7 1217 aa10.96□□□□□ -0.65
CLDN2-201ENST00000336803 DDX49Q9Y6V7 483 aaKnown RBP10.96□□□□□ -0.65
CLDN2-201ENST00000336803 DOCK2Q92608 1830 aa10.96□□□□□ -0.65
CLDN2-201ENST00000336803 HSPD1P10809 573 aaKnown RBP10.96□□□□□ -0.66
CLDN2-201ENST00000336803 FAM98CQ17RN3 349 aaKnown RBP10.96□□□□□ -0.66
CLDN2-201ENST00000336803 RC3H1Q5TC82 1133 aaKnown RBP10.96□□□□□ -0.66
CLDN2-201ENST00000336803 CCDC85AQ96PX6 553 aaPredicted RBP10.96□□□□□ -0.66
CLDN2-201ENST00000336803 BTAF1O14981 1849 aa10.96□□□□□ -0.66
CLDN2-201ENST00000336803 A0A1B0GUL6 1792 aa10.96□□□□□ -0.66
CLDN2-201ENST00000336803 STX6O43752 255 aa10.95□□□□□ -0.66
CLDN2-201ENST00000336803 ZSCAN22P10073 491 aaPredicted RBP10.95□□□□□ -0.66
CLDN2-201ENST00000336803 SYT1P21579 422 aa10.95□□□□□ -0.66
CLDN2-201ENST00000336803 MRE11P49959 708 aa10.95□□□□□ -0.66
CLDN2-201ENST00000336803 COL9A3Q14050 684 aaPredicted RBP10.95□□□□□ -0.66
CLDN2-201ENST00000336803 GORABQ5T7V8 394 aa10.95□□□□□ -0.66
CLDN2-201ENST00000336803 FBXL16Q8N461 479 aa10.95□□□□□ -0.66
CLDN2-201ENST00000336803 BBXQ8WY36 941 aaPredicted RBP10.95□□□□□ -0.66
CLDN2-201ENST00000336803 AGXT2Q9BYV1 514 aa10.95□□□□□ -0.66
CLDN2-201ENST00000336803 CNNM1Q9NRU3 951 aa10.95□□□□□ -0.66
CLDN2-201ENST00000336803 LY75O60449 1722 aa10.95□□□□□ -0.66
CLDN2-201ENST00000336803 COL24A1Q17RW2 1714 aa10.95□□□□□ -0.66
CLDN2-201ENST00000336803 M0R2C6 588 aa10.95□□□□□ -0.66
CLDN2-201ENST00000336803 ZNF445P59923 1031 aa10.95□□□□□ -0.66
CLDN2-201ENST00000336803 SCARF1Q14162 830 aa10.95□□□□□ -0.66
CLDN2-201ENST00000336803 LPIN2Q92539 896 aa10.95□□□□□ -0.66
CLDN2-201ENST00000336803 NGLY1Q96IV0 654 aa10.95□□□□□ -0.66
CLDN2-201ENST00000336803 PRPF40AO75400 957 aaKnown RBP10.95□□□□□ -0.66
CLDN2-201ENST00000336803 GJB2P29033 226 aa10.95□□□□□ -0.66
CLDN2-201ENST00000336803 MCAMP43121 646 aa10.95□□□□□ -0.66
CLDN2-201ENST00000336803 ZAP70P43403 619 aa10.95□□□□□ -0.66
CLDN2-201ENST00000336803 TTF1Q15361 905 aaPredicted RBP10.95□□□□□ -0.66
CLDN2-201ENST00000336803 PUM3Q15397 648 aaKnown RBP10.95□□□□□ -0.66
CLDN2-201ENST00000336803 CCDC83Q8IWF9 413 aa10.95□□□□□ -0.66
CLDN2-201ENST00000336803 LINC00116Q8NCU8 138 aa10.95□□□□□ -0.66
CLDN2-201ENST00000336803 GPT2Q8TD30 523 aa10.95□□□□□ -0.66
CLDN2-201ENST00000336803 OSBP2Q969R2 916 aa10.95□□□□□ -0.66
CLDN2-201ENST00000336803 LARP6Q9BRS8 491 aaKnown RBP10.95□□□□□ -0.66
CLDN2-201ENST00000336803 ZNF652Q9Y2D9 606 aa10.95□□□□□ -0.66
CLDN2-201ENST00000336803 UQCRFS1P1P0C7P4 283 aa10.94□□□□□ -0.66
CLDN2-201ENST00000336803 XRCC6P12956 609 aaKnown RBP eCLIP10.94□□□□□ -0.66
CLDN2-201ENST00000336803 NCLP19338 710 aaKnown RBP10.94□□□□□ -0.66
CLDN2-201ENST00000336803 EXOSC10Q01780 885 aaKnown RBP10.94□□□□□ -0.66
CLDN2-201ENST00000336803 APPBP2Q92624 585 aa10.94□□□□□ -0.66
CLDN2-201ENST00000336803 C8orf37Q96NL8 207 aa10.94□□□□□ -0.66
CLDN2-201ENST00000336803 MBD3O95983 291 aa10.94□□□□□ -0.66
CLDN2-201ENST00000336803 FKBP4Q02790 459 aaKnown RBP eCLIP10.94□□□□□ -0.66
CLDN2-201ENST00000336803 CCDC152Q4G0S7 254 aa10.94□□□□□ -0.66
CLDN2-201ENST00000336803 STOX1Q6ZVD7 989 aa10.94□□□□□ -0.66
CLDN2-201ENST00000336803 FOXP2O15409 715 aa10.93□□□□□ -0.66
CLDN2-201ENST00000336803 F13A1P00488 732 aa10.93□□□□□ -0.66
CLDN2-201ENST00000336803 SLFNL1Q499Z3 407 aa10.93□□□□□ -0.66
CLDN2-201ENST00000336803 ZSCAN25Q6NSZ9 544 aa10.93□□□□□ -0.66
CLDN2-201ENST00000336803 IPO4Q8TEX9 1081 aaKnown RBP10.93□□□□□ -0.66
CLDN2-201ENST00000336803 SBF2Q86WG5 1849 aa10.93□□□□□ -0.66
CLDN2-201ENST00000336803 TAF1LQ8IZX4 1826 aa10.93□□□□□ -0.66
CLDN2-201ENST00000336803 CLCN1P35523 988 aa10.93□□□□□ -0.66
CLDN2-201ENST00000336803 DHX32Q7L7V1 743 aaKnown RBP10.93□□□□□ -0.66
CLDN2-201ENST00000336803 CTNNA3Q9UI47 895 aa10.93□□□□□ -0.66
CLDN2-201ENST00000336803 MTMR6Q9Y217 621 aa10.93□□□□□ -0.66
CLDN2-201ENST00000336803 NIP7Q9Y221 180 aaKnown RBP eCLIP10.93□□□□□ -0.66
CLDN2-201ENST00000336803 ATP6V1DQ9Y5K8 247 aa10.93□□□□□ -0.66
CLDN2-201ENST00000336803 HCLS1P14317 486 aaPredicted RBP10.92□□□□□ -0.66
CLDN2-201ENST00000336803 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.92□□□□□ -0.66
CLDN2-201ENST00000336803 GRPEL1Q9HAV7 217 aa10.92□□□□□ -0.66
CLDN2-201ENST00000336803 ADD2P35612 726 aa10.92□□□□□ -0.66
CLDN2-201ENST00000336803 UBE3CQ15386 1083 aa10.92□□□□□ -0.66
CLDN2-201ENST00000336803 SLC10A5Q5PT55 438 aa10.92□□□□□ -0.66
CLDN2-201ENST00000336803 CCDC102BQ68D86 513 aa10.92□□□□□ -0.66
CLDN2-201ENST00000336803 GAS2L3Q86XJ1 694 aa10.92□□□□□ -0.66
CLDN2-201ENST00000336803 MYO5AQ9Y4I1 1855 aaKnown RBP10.92□□□□□ -0.66
CLDN2-201ENST00000336803 E7EWF7 191 aa10.92□□□□□ -0.66
CLDN2-201ENST00000336803 SLC5A1P13866 664 aa10.92□□□□□ -0.66
CLDN2-201ENST00000336803 SF3B3Q15393 1217 aaKnown RBP10.92□□□□□ -0.66
CLDN2-201ENST00000336803 Q6ZUG5 572 aa10.92□□□□□ -0.66
CLDN2-201ENST00000336803 NECAB1Q8N987 351 aa10.92□□□□□ -0.66
CLDN2-201ENST00000336803 GTF3C6Q969F1 213 aa10.92□□□□□ -0.66
CLDN2-201ENST00000336803 ONECUT3O60422 494 aaPredicted RBP10.91□□□□□ -0.66
CLDN2-201ENST00000336803 PDCP20941 246 aa10.91□□□□□ -0.66
CLDN2-201ENST00000336803 EVCP57679 992 aa10.91□□□□□ -0.66
CLDN2-201ENST00000336803 ZSCAN23Q3MJ62 389 aa10.91□□□□□ -0.66
CLDN2-201ENST00000336803 USP21Q9UK80 565 aa10.91□□□□□ -0.66
CLDN2-201ENST00000336803 PFKFB2O60825 505 aa10.91□□□□□ -0.66
CLDN2-201ENST00000336803 PHKA1P46020 1223 aa10.91□□□□□ -0.66
CLDN2-201ENST00000336803 FOXD4L5Q5VV16 416 aaPredicted RBP10.91□□□□□ -0.66
CLDN2-201ENST00000336803 FOXD4L4Q8WXT5 416 aaPredicted RBP10.91□□□□□ -0.66
CLDN2-201ENST00000336803 CHAMP1Q96JM3 812 aa10.91□□□□□ -0.66
CLDN2-201ENST00000336803 LLPHQ9BRT6 129 aaKnown RBP10.91□□□□□ -0.66
CLDN2-201ENST00000336803 PUS7LQ9H0K6 701 aaKnown RBP10.91□□□□□ -0.66
CLDN2-201ENST00000336803 WDR19Q8NEZ3 1342 aa10.9□□□□□ -0.66
CLDN2-201ENST00000336803 TCRBV5S4A2TA0A5A2 114 aa10.9□□□□□ -0.66
CLDN2-201ENST00000336803 RPS6KA4O75676 772 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms