RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 ASIC1P78348 528 aa14.8□□□□□ -0.04
HLCS-201ENST00000336648 GIMAP6Q6P9H5 292 aa14.8□□□□□ -0.04
HLCS-201ENST00000336648 CCDC144CPQ8IYA2 1237 aa14.8□□□□□ -0.04
HLCS-201ENST00000336648 ANKRD44Q8N8A2 993 aa14.8□□□□□ -0.04
HLCS-201ENST00000336648 PPFIBP2Q8ND30 876 aa14.8□□□□□ -0.04
HLCS-201ENST00000336648 AMOTL2Q9Y2J4 779 aa14.8□□□□□ -0.04
HLCS-201ENST00000336648 CCDC14Q49A88 953 aa14.8□□□□□ -0.04
HLCS-201ENST00000336648 USHBP1Q8N6Y0 703 aa14.8□□□□□ -0.04
HLCS-201ENST00000336648 KRT79Q5XKE5 535 aa14.8□□□□□ -0.04
HLCS-201ENST00000336648 CCDC110Q8TBZ0 833 aa14.8□□□□□ -0.04
HLCS-201ENST00000336648 CCDC42Q96M95 316 aa14.8□□□□□ -0.04
HLCS-201ENST00000336648 EBAG9O00559 213 aa14.8□□□□□ -0.04
HLCS-201ENST00000336648 SYT1P21579 422 aa14.8□□□□□ -0.04
HLCS-201ENST00000336648 GPTP24298 496 aa14.8□□□□□ -0.04
HLCS-201ENST00000336648 ATP2B3Q16720 1220 aa14.8□□□□□ -0.04
HLCS-201ENST00000336648 RBM8AQ9Y5S9 174 aaKnown RBP14.8□□□□□ -0.04
HLCS-201ENST00000336648 PSMC4P43686 418 aa14.79□□□□□ -0.04
HLCS-201ENST00000336648 TNNC1P63316 161 aa14.79□□□□□ -0.04
HLCS-201ENST00000336648 STX8Q9UNK0 236 aa14.79□□□□□ -0.04
HLCS-201ENST00000336648 SOS1Q07889 1333 aaPredicted RBP14.79□□□□□ -0.04
HLCS-201ENST00000336648 RTL1A6NKG5 1358 aa14.79□□□□□ -0.04
HLCS-201ENST00000336648 PDE1AP54750 535 aa14.79□□□□□ -0.04
HLCS-201ENST00000336648 HS2ST1Q7LGA3 356 aa14.79□□□□□ -0.04
HLCS-201ENST00000336648 CCDC186Q7Z3E2 898 aa14.79□□□□□ -0.04
HLCS-201ENST00000336648 ZKSCAN5Q9Y2L8 839 aa14.79□□□□□ -0.04
HLCS-201ENST00000336648 KIF14Q15058 1648 aa14.79□□□□□ -0.04
HLCS-201ENST00000336648 SPTLC2O15270 562 aa14.79□□□□□ -0.04
HLCS-201ENST00000336648 SDSP20132 328 aa14.79□□□□□ -0.04
HLCS-201ENST00000336648 ATP8B2P98198 1209 aa14.79□□□□□ -0.04
HLCS-201ENST00000336648 NCBP1Q09161 790 aaKnown RBP14.79□□□□□ -0.04
HLCS-201ENST00000336648 CYP7A1P22680 504 aa14.79□□□□□ -0.04
HLCS-201ENST00000336648 SNRKQ9NRH2 765 aa14.79□□□□□ -0.04
HLCS-201ENST00000336648 SLC4A4Q9Y6R1 1079 aa14.79□□□□□ -0.04
HLCS-201ENST00000336648 VAV2P52735 878 aa14.79□□□□□ -0.04
HLCS-201ENST00000336648 MAP3K9P80192 1104 aa14.79□□□□□ -0.04
HLCS-201ENST00000336648 NEK11Q8NG66 645 aa14.79□□□□□ -0.04
HLCS-201ENST00000336648 SUDS3Q9H7L9 328 aaPredicted RBP14.78□□□□□ -0.04
HLCS-201ENST00000336648 LUC7L2Q9Y383 392 aaKnown RBP14.78□□□□□ -0.04
HLCS-201ENST00000336648 NPHP3Q7Z494 1330 aa14.78□□□□□ -0.04
HLCS-201ENST00000336648 A6NNZ2 444 aa14.78□□□□□ -0.04
HLCS-201ENST00000336648 AFMP43652 599 aa14.78□□□□□ -0.04
HLCS-201ENST00000336648 TUBB8Q3ZCM7 444 aa14.78□□□□□ -0.04
HLCS-201ENST00000336648 INTS4Q96HW7 963 aaKnown RBP14.78□□□□□ -0.04
HLCS-201ENST00000336648 C14orf93Q9H972 538 aaKnown RBP14.78□□□□□ -0.04
HLCS-201ENST00000336648 RBM28Q9NW13 759 aaKnown RBP14.78□□□□□ -0.04
HLCS-201ENST00000336648 CAPN2P17655 700 aa14.78□□□□□ -0.04
HLCS-201ENST00000336648 ZBTB16Q05516 673 aa14.78□□□□□ -0.04
HLCS-201ENST00000336648 NBPF11Q86T75 865 aa14.78□□□□□ -0.04
HLCS-201ENST00000336648 USP48Q86UV5 1035 aa14.78□□□□□ -0.04
HLCS-201ENST00000336648 RASSF4Q9H2L5 321 aa14.78□□□□□ -0.04
HLCS-201ENST00000336648 MTUS1Q9ULD2 1270 aa14.78□□□□□ -0.04
HLCS-201ENST00000336648 A0A1B0GUL7 405 aa14.78□□□□□ -0.04
HLCS-201ENST00000336648 NDC80O14777 642 aa14.78□□□□□ -0.04
HLCS-201ENST00000336648 NAPAP54920 295 aa14.78□□□□□ -0.04
HLCS-201ENST00000336648 LACTBP83111 547 aaPredicted RBP14.78□□□□□ -0.04
HLCS-201ENST00000336648 CFAP58Q5T655 872 aa14.78□□□□□ -0.04
HLCS-201ENST00000336648 CCDC114Q96M63 670 aa14.78□□□□□ -0.04
HLCS-201ENST00000336648 ZSWIM4Q9H7M6 989 aa14.78□□□□□ -0.04
HLCS-201ENST00000336648 GNA11P29992 359 aa14.78□□□□□ -0.04
HLCS-201ENST00000336648 SMARCC2Q8TAQ2 1214 aa14.78□□□□□ -0.04
HLCS-201ENST00000336648 PSMD1Q99460 953 aa14.78□□□□□ -0.04
HLCS-201ENST00000336648 ATP5DP30049 168 aa14.77□□□□□ -0.04
HLCS-201ENST00000336648 AOPEPQ8N6M6 819 aa14.77□□□□□ -0.04
HLCS-201ENST00000336648 CD109Q6YHK3 1445 aa14.77□□□□□ -0.04
HLCS-201ENST00000336648 CNGA4Q8IV77 575 aa14.77□□□□□ -0.04
HLCS-201ENST00000336648 KRT28Q7Z3Y7 464 aa14.77□□□□□ -0.05
HLCS-201ENST00000336648 DACT1Q9NYF0 836 aa14.77□□□□□ -0.05
HLCS-201ENST00000336648 MRVI1Q9Y6F6 885 aa14.77□□□□□ -0.05
HLCS-201ENST00000336648 RPL13P26373 211 aaKnown RBP14.77□□□□□ -0.05
HLCS-201ENST00000336648 RFC1P35251 1148 aaPredicted RBP14.77□□□□□ -0.05
HLCS-201ENST00000336648 NAA16Q6N069 864 aaPredicted RBP14.77□□□□□ -0.05
HLCS-201ENST00000336648 GSTA5Q7RTV2 222 aa14.77□□□□□ -0.05
HLCS-201ENST00000336648 LMNTD2Q8IXW0 634 aa14.77□□□□□ -0.05
HLCS-201ENST00000336648 RRP36Q96EU6 259 aaKnown RBP14.77□□□□□ -0.05
HLCS-201ENST00000336648 CASQ2O14958 399 aaPredicted RBP14.76□□□□□ -0.05
HLCS-201ENST00000336648 RFC4P35249 363 aa14.76□□□□□ -0.05
HLCS-201ENST00000336648 KRT2P35908 639 aa14.76□□□□□ -0.05
HLCS-201ENST00000336648 SETDB1Q15047 1291 aa14.76□□□□□ -0.05
HLCS-201ENST00000336648 HEATR3Q7Z4Q2 680 aa14.76□□□□□ -0.05
HLCS-201ENST00000336648 PTPN23Q9H3S7 1636 aa14.76□□□□□ -0.05
HLCS-201ENST00000336648 ZNF804AQ7Z570 1209 aa14.76□□□□□ -0.05
HLCS-201ENST00000336648 CSRNP2Q9H175 543 aa14.76□□□□□ -0.05
HLCS-201ENST00000336648 ADGRL1O94910 1474 aa14.76□□□□□ -0.05
HLCS-201ENST00000336648 TRIM14Q14142 442 aa14.76□□□□□ -0.05
HLCS-201ENST00000336648 NBPF6Q5VWK0 638 aa14.76□□□□□ -0.05
HLCS-201ENST00000336648 Q6ZUG5 572 aa14.76□□□□□ -0.05
HLCS-201ENST00000336648 NBPF5PQ86XG9 351 aaPredicted RBP14.76□□□□□ -0.05
HLCS-201ENST00000336648 NBPF4Q96M43 638 aa14.76□□□□□ -0.05
HLCS-201ENST00000336648 MMRN2Q9H8L6 949 aa14.76□□□□□ -0.05
HLCS-201ENST00000336648 CNPY2Q9Y2B0 182 aa14.76□□□□□ -0.05
HLCS-201ENST00000336648 ARID4AP29374 1257 aaPredicted RBP14.76□□□□□ -0.05
HLCS-201ENST00000336648 VWA3BQ502W6 1294 aa14.76□□□□□ -0.05
HLCS-201ENST00000336648 ISM2Q6H9L7 571 aa14.76□□□□□ -0.05
HLCS-201ENST00000336648 KSR2Q6VAB6 950 aa14.76□□□□□ -0.05
HLCS-201ENST00000336648 ABCC5O15440 1437 aa14.76□□□□□ -0.05
HLCS-201ENST00000336648 CROCCP2Q86T23 111 aa14.76□□□□□ -0.05
HLCS-201ENST00000336648 DNMBPQ6XZF7 1577 aa14.75□□□□□ -0.05
HLCS-201ENST00000336648 GRM8O00222 908 aa14.75□□□□□ -0.05
HLCS-201ENST00000336648 FAM13AO94988 1023 aa14.75□□□□□ -0.05
HLCS-201ENST00000336648 DMRT2Q9Y5R5 561 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms