RNA–Protein interactions for RNA: ENST00000332797.10

CCDC28A-201, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-201ENST00000332797 WDR90Q96KV7 1748 aa19.72■□□□□ 0.75
CCDC28A-201ENST00000332797 IRS2Q9Y4H2 1338 aa19.72■□□□□ 0.75
CCDC28A-201ENST00000332797 PUM3Q15397 648 aaKnown RBP19.72■□□□□ 0.75
CCDC28A-201ENST00000332797 C15orf52Q6ZUT6 534 aaKnown RBP19.72■□□□□ 0.75
CCDC28A-201ENST00000332797 CRBNQ96SW2 442 aa19.72■□□□□ 0.75
CCDC28A-201ENST00000332797 RRAGCQ9HB90 399 aa19.72■□□□□ 0.75
CCDC28A-201ENST00000332797 KCNQ5Q9NR82 932 aa19.72■□□□□ 0.75
CCDC28A-201ENST00000332797 CEP126Q9P2H0 1117 aa19.72■□□□□ 0.75
CCDC28A-201ENST00000332797 G3BP1Q13283 466 aaKnown RBP eCLIP19.71■□□□□ 0.75
CCDC28A-201ENST00000332797 TNIP1Q15025 636 aa19.71■□□□□ 0.75
CCDC28A-201ENST00000332797 ZNF804AQ7Z570 1209 aa19.71■□□□□ 0.75
CCDC28A-201ENST00000332797 COA1Q9GZY4 146 aa19.71■□□□□ 0.75
CCDC28A-201ENST00000332797 PODNQ7Z5L7 613 aa19.7■□□□□ 0.74
CCDC28A-201ENST00000332797 RPAP2Q8IXW5 612 aaPredicted RBP19.7■□□□□ 0.74
CCDC28A-201ENST00000332797 SCN9AQ15858 1988 aa19.7■□□□□ 0.74
CCDC28A-201ENST00000332797 PSMD14O00487 310 aa19.69■□□□□ 0.74
CCDC28A-201ENST00000332797 SURF6O75683 361 aaKnown RBP19.69■□□□□ 0.74
CCDC28A-201ENST00000332797 TFCP2Q12800 502 aa19.69■□□□□ 0.74
CCDC28A-201ENST00000332797 OS9Q13438 667 aaPredicted RBP19.69■□□□□ 0.74
CCDC28A-201ENST00000332797 L3MBTL3Q96JM7 780 aaPredicted RBP19.69■□□□□ 0.74
CCDC28A-201ENST00000332797 IFIT1P09914 478 aaKnown RBP19.68■□□□□ 0.74
CCDC28A-201ENST00000332797 SLC5A1P13866 664 aa19.68■□□□□ 0.74
CCDC28A-201ENST00000332797 FGFR2P21802 821 aa19.68■□□□□ 0.74
CCDC28A-201ENST00000332797 GYG1P46976 350 aa19.68■□□□□ 0.74
CCDC28A-201ENST00000332797 ATP2B3Q16720 1220 aa19.68■□□□□ 0.74
CCDC28A-201ENST00000332797 FBXW7Q969H0 707 aa19.68■□□□□ 0.74
CCDC28A-201ENST00000332797 POTECB2RU33 542 aa19.67■□□□□ 0.74
CCDC28A-201ENST00000332797 HMMRO75330 724 aa19.67■□□□□ 0.74
CCDC28A-201ENST00000332797 VEGFAP15692 232 aaPredicted RBP19.67■□□□□ 0.74
CCDC28A-201ENST00000332797 SIRT2Q8IXJ6 389 aa19.67■□□□□ 0.74
CCDC28A-201ENST00000332797 LPIN2Q92539 896 aa19.67■□□□□ 0.74
CCDC28A-201ENST00000332797 CD209Q9NNX6 404 aa19.67■□□□□ 0.74
CCDC28A-201ENST00000332797 KIF3CO14782 793 aa19.67■□□□□ 0.74
CCDC28A-201ENST00000332797 HIBADHP31937 336 aaKnown RBP19.67■□□□□ 0.74
CCDC28A-201ENST00000332797 GMPSP49915 693 aaPredicted RBP19.67■□□□□ 0.74
CCDC28A-201ENST00000332797 VPS37DQ86XT2 251 aa19.67■□□□□ 0.74
CCDC28A-201ENST00000332797 FAM84BQ96KN1 310 aaPredicted RBP19.67■□□□□ 0.74
CCDC28A-201ENST00000332797 NOP58Q9Y2X3 529 aaKnown RBP19.67■□□□□ 0.74
CCDC28A-201ENST00000332797 ZBTB12Q9Y330 459 aaPredicted RBP19.67■□□□□ 0.74
CCDC28A-201ENST00000332797 PSME4Q14997 1843 aa19.66■□□□□ 0.74
CCDC28A-201ENST00000332797 SCN4AP35499 1836 aa19.66■□□□□ 0.74
CCDC28A-201ENST00000332797 IQCA1LA6NCM1 817 aa19.66■□□□□ 0.74
CCDC28A-201ENST00000332797 USP17L3A6NCW0 530 aa19.66■□□□□ 0.74
CCDC28A-201ENST00000332797 USP17L4A6NCW7 530 aa19.66■□□□□ 0.74
CCDC28A-201ENST00000332797 LMOD1P29536 600 aaPredicted RBP19.66■□□□□ 0.74
CCDC28A-201ENST00000332797 SCNN1DP51172 638 aa19.66■□□□□ 0.74
CCDC28A-201ENST00000332797 CAVIN4Q5BKX8 364 aa19.66■□□□□ 0.74
CCDC28A-201ENST00000332797 USP17L1Q7RTZ2 530 aa19.66■□□□□ 0.74
CCDC28A-201ENST00000332797 HACL1Q9UJ83 578 aa19.66■□□□□ 0.74
CCDC28A-201ENST00000332797 EXOC6BQ9Y2D4 811 aa19.66■□□□□ 0.74
CCDC28A-201ENST00000332797 SASH1O94885 1247 aa19.65■□□□□ 0.74
CCDC28A-201ENST00000332797 VIL1P09327 827 aaKnown RBP19.65■□□□□ 0.74
CCDC28A-201ENST00000332797 IL1R1P14778 569 aa19.65■□□□□ 0.74
CCDC28A-201ENST00000332797 C16orf71Q8IYS4 520 aaPredicted RBP19.65■□□□□ 0.74
CCDC28A-201ENST00000332797 AKAP2Q9Y2D5 859 aa19.65■□□□□ 0.74
CCDC28A-201ENST00000332797 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.65■□□□□ 0.74
CCDC28A-201ENST00000332797 ARAP2Q8WZ64 1704 aa19.65■□□□□ 0.74
CCDC28A-201ENST00000332797 FBXO33Q7Z6M2 555 aa19.64■□□□□ 0.73
CCDC28A-201ENST00000332797 ZNF609O15014 1411 aa19.64■□□□□ 0.73
CCDC28A-201ENST00000332797 ZNF646O15015 1829 aaPredicted RBP19.63■□□□□ 0.73
CCDC28A-201ENST00000332797 A0A1B0GUL7 405 aa19.63■□□□□ 0.73
CCDC28A-201ENST00000332797 BCAMP50895 628 aa19.63■□□□□ 0.73
CCDC28A-201ENST00000332797 GTF2IP78347 998 aa19.63■□□□□ 0.73
CCDC28A-201ENST00000332797 TTLL5Q6EMB2 1281 aa19.63■□□□□ 0.73
CCDC28A-201ENST00000332797 RSBN1LQ6PCB5 846 aaPredicted RBP19.63■□□□□ 0.73
CCDC28A-201ENST00000332797 GPRC5DQ9NZD1 345 aa19.63■□□□□ 0.73
CCDC28A-201ENST00000332797 IQSEC3Q9UPP2 1182 aaPredicted RBP19.63■□□□□ 0.73
CCDC28A-201ENST00000332797 RPS12P25398 132 aaKnown RBP19.62■□□□□ 0.73
CCDC28A-201ENST00000332797 ADORA1P30542 326 aa19.62■□□□□ 0.73
CCDC28A-201ENST00000332797 EPHX2P34913 555 aa19.62■□□□□ 0.73
CCDC28A-201ENST00000332797 EPS15P42566 896 aa19.62■□□□□ 0.73
CCDC28A-201ENST00000332797 TIMM10P62072 90 aa19.62■□□□□ 0.73
CCDC28A-201ENST00000332797 DACT2Q5SW24 774 aa19.62■□□□□ 0.73
CCDC28A-201ENST00000332797 STRIP1Q5VSL9 837 aa19.62■□□□□ 0.73
CCDC28A-201ENST00000332797 MXD3Q9BW11 206 aa19.62■□□□□ 0.73
CCDC28A-201ENST00000332797 TAF1DQ9H5J8 278 aaPredicted RBP19.62■□□□□ 0.73
CCDC28A-201ENST00000332797 JAG2Q9Y219 1238 aa19.62■□□□□ 0.73
CCDC28A-201ENST00000332797 FRAT2O75474 233 aaPredicted RBP19.61■□□□□ 0.73
CCDC28A-201ENST00000332797 HSP90AB4PQ58FF6 505 aa19.61■□□□□ 0.73
CCDC28A-201ENST00000332797 ERC1Q8IUD2 1116 aa19.61■□□□□ 0.73
CCDC28A-201ENST00000332797 TDRD7Q8NHU6 1098 aaKnown RBP19.61■□□□□ 0.73
CCDC28A-201ENST00000332797 NEUROD6Q96NK8 337 aa19.61■□□□□ 0.73
CCDC28A-201ENST00000332797 PCDHB15Q9Y5E8 787 aa19.61■□□□□ 0.73
CCDC28A-201ENST00000332797 SHTN1A0MZ66 631 aa19.6■□□□□ 0.73
CCDC28A-201ENST00000332797 APBB1O00213 710 aa19.6■□□□□ 0.73
CCDC28A-201ENST00000332797 IRX6P78412 446 aaPredicted RBP19.6■□□□□ 0.73
CCDC28A-201ENST00000332797 MICALL2Q8IY33 904 aa19.6■□□□□ 0.73
CCDC28A-201ENST00000332797 AGBL3Q8NEM8 1001 aa19.6■□□□□ 0.73
CCDC28A-201ENST00000332797 EXOC6Q8TAG9 804 aa19.6■□□□□ 0.73
CCDC28A-201ENST00000332797 DPF2Q92785 391 aa19.6■□□□□ 0.73
CCDC28A-201ENST00000332797 CNOT7Q9UIV1 285 aaKnown RBP19.6■□□□□ 0.73
CCDC28A-201ENST00000332797 EAPPQ56P03 285 aaPredicted RBP19.6■□□□□ 0.73
CCDC28A-201ENST00000332797 XAGE2Q96GT9 111 aa19.6■□□□□ 0.73
CCDC28A-201ENST00000332797 GPR108Q9NPR9 543 aa19.6■□□□□ 0.73
CCDC28A-201ENST00000332797 MYO3BQ8WXR4 1341 aa19.59■□□□□ 0.73
CCDC28A-201ENST00000332797 CHAF1AQ13111 956 aaPredicted RBP19.59■□□□□ 0.73
CCDC28A-201ENST00000332797 TNNI3KQ59H18 835 aa19.59■□□□□ 0.73
CCDC28A-201ENST00000332797 ADARB2Q9NS39 739 aaKnown RBP19.59■□□□□ 0.73
CCDC28A-201ENST00000332797 FPGT-TNNI3KV9GXZ4 949 aa19.59■□□□□ 0.73
CCDC28A-201ENST00000332797 H7C1D1 291 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms