RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 GLYCTKQ8IVS8 523 aa6.87□□□□□ -1.31
SKP1-201ENST00000328392 GJD3Q8N144 294 aa6.87□□□□□ -1.31
SKP1-201ENST00000328392 LENG1Q96BZ8 264 aaPredicted RBP6.87□□□□□ -1.31
SKP1-201ENST00000328392 HHIPQ96QV1 700 aa6.87□□□□□ -1.31
SKP1-201ENST00000328392 NACC1Q96RE7 527 aa6.87□□□□□ -1.31
SKP1-201ENST00000328392 POP1Q99575 1024 aaKnown RBP6.87□□□□□ -1.31
SKP1-201ENST00000328392 SH2B1Q9NRF2 756 aaPredicted RBP6.87□□□□□ -1.31
SKP1-201ENST00000328392 C9orf172C9J069 976 aa6.86□□□□□ -1.31
SKP1-201ENST00000328392 NFKBIEO00221 500 aa6.86□□□□□ -1.31
SKP1-201ENST00000328392 ADAM23O75077 832 aa6.86□□□□□ -1.31
SKP1-201ENST00000328392 ADGRE1Q14246 886 aa6.86□□□□□ -1.31
SKP1-201ENST00000328392 SETDB1Q15047 1291 aa6.86□□□□□ -1.31
SKP1-201ENST00000328392 CCDC27Q2M243 656 aa6.86□□□□□ -1.31
SKP1-201ENST00000328392 TPSG1Q9NRR2 321 aa6.86□□□□□ -1.31
SKP1-201ENST00000328392 USP21Q9UK80 565 aa6.86□□□□□ -1.31
SKP1-201ENST00000328392 LINC01387J3KSC0 135 aa6.85□□□□□ -1.31
SKP1-201ENST00000328392 DLL1O00548 723 aa6.85□□□□□ -1.31
SKP1-201ENST00000328392 SMNDC1O75940 238 aaKnown RBP eCLIP6.85□□□□□ -1.31
SKP1-201ENST00000328392 USP5P45974 858 aa6.85□□□□□ -1.31
SKP1-201ENST00000328392 DZANK1Q9NVP4 752 aa6.85□□□□□ -1.31
SKP1-201ENST00000328392 PPME1Q9Y570 386 aa6.85□□□□□ -1.31
SKP1-201ENST00000328392 PHACTR2O75167 634 aa6.84□□□□□ -1.31
SKP1-201ENST00000328392 POLR3DP05423 398 aaPredicted RBP6.84□□□□□ -1.31
SKP1-201ENST00000328392 EPHA1P21709 976 aa6.84□□□□□ -1.31
SKP1-201ENST00000328392 CDC27P30260 824 aa6.84□□□□□ -1.31
SKP1-201ENST00000328392 GALNT11Q8NCW6 608 aa6.84□□□□□ -1.31
SKP1-201ENST00000328392 FOXD4L4Q8WXT5 416 aaPredicted RBP6.84□□□□□ -1.31
SKP1-201ENST00000328392 LATS2Q9NRM7 1088 aa6.84□□□□□ -1.31
SKP1-201ENST00000328392 K7ELQ4 463 aaPredicted RBP6.83□□□□□ -1.32
SKP1-201ENST00000328392 EHHADHQ08426 723 aa6.83□□□□□ -1.32
SKP1-201ENST00000328392 IGF2-ASQ6U949 168 aa6.83□□□□□ -1.32
SKP1-201ENST00000328392 SNX29Q8TEQ0 813 aa6.83□□□□□ -1.32
SKP1-201ENST00000328392 CARD10Q9BWT7 1032 aa6.83□□□□□ -1.32
SKP1-201ENST00000328392 BRPF3Q9ULD4 1205 aa6.83□□□□□ -1.32
SKP1-201ENST00000328392 PDE2AO00408 941 aaPredicted RBP6.82□□□□□ -1.32
SKP1-201ENST00000328392 TM4SF5O14894 197 aa6.82□□□□□ -1.32
SKP1-201ENST00000328392 ALX3O95076 343 aa6.82□□□□□ -1.32
SKP1-201ENST00000328392 ITGB7P26010 798 aa6.82□□□□□ -1.32
SKP1-201ENST00000328392 NOS3P29474 1203 aa6.82□□□□□ -1.32
SKP1-201ENST00000328392 IREB2P48200 963 aaKnown RBP6.82□□□□□ -1.32
SKP1-201ENST00000328392 NRG1Q02297 640 aaPredicted RBP6.82□□□□□ -1.32
SKP1-201ENST00000328392 RSPO4Q2I0M5 234 aaPredicted RBP6.82□□□□□ -1.32
SKP1-201ENST00000328392 TXNRD3Q86VQ6 643 aa6.82□□□□□ -1.32
SKP1-201ENST00000328392 WFDC12Q8WWY7 111 aa6.82□□□□□ -1.32
SKP1-201ENST00000328392 PMEPA1Q969W9 287 aa6.82□□□□□ -1.32
SKP1-201ENST00000328392 OSMRQ99650 979 aa6.82□□□□□ -1.32
SKP1-201ENST00000328392 ZKSCAN3Q9BRR0 538 aa6.82□□□□□ -1.32
SKP1-201ENST00000328392 ADAM19Q9H013 955 aa6.82□□□□□ -1.32
SKP1-201ENST00000328392 ZFYVE28Q9HCC9 887 aa6.82□□□□□ -1.32
SKP1-201ENST00000328392 KCNK4Q9NYG8 393 aa6.82□□□□□ -1.32
SKP1-201ENST00000328392 PTPRAP18433 802 aa6.81□□□□□ -1.32
SKP1-201ENST00000328392 NKAPLQ5M9Q1 402 aa6.81□□□□□ -1.32
SKP1-201ENST00000328392 PEAR1Q5VY43 1037 aaPredicted RBP6.81□□□□□ -1.32
SKP1-201ENST00000328392 USPL1Q5W0Q7 1092 aa6.81□□□□□ -1.32
SKP1-201ENST00000328392 CACTIN-AS1Q8N1I8 211 aa6.81□□□□□ -1.32
SKP1-201ENST00000328392 SEMA6BQ9H3T3 888 aa6.81□□□□□ -1.32
SKP1-201ENST00000328392 MAPK1P28482 360 aa6.8□□□□□ -1.32
SKP1-201ENST00000328392 FOXD4L6Q3SYB3 417 aaPredicted RBP6.8□□□□□ -1.32
SKP1-201ENST00000328392 HGSNATQ68CP4 663 aa6.8□□□□□ -1.32
SKP1-201ENST00000328392 FOXD4L3Q6VB84 417 aaPredicted RBP6.8□□□□□ -1.32
SKP1-201ENST00000328392 NXPE3Q969Y0 559 aa6.8□□□□□ -1.32
SKP1-201ENST00000328392 SSBP4Q9BWG4 385 aaPredicted RBP6.8□□□□□ -1.32
SKP1-201ENST00000328392 MUC3BQ9H195 1237 aa6.8□□□□□ -1.32
SKP1-201ENST00000328392 AMOTL2Q9Y2J4 779 aa6.8□□□□□ -1.32
SKP1-201ENST00000328392 FSCN2O14926 492 aa6.79□□□□□ -1.32
SKP1-201ENST00000328392 DDX3YO15523 660 aaKnown RBP6.79□□□□□ -1.32
SKP1-201ENST00000328392 NDUFB5O43674 189 aa6.79□□□□□ -1.32
SKP1-201ENST00000328392 WISP1O95388 367 aa6.79□□□□□ -1.32
SKP1-201ENST00000328392 ORC1Q13415 861 aa6.79□□□□□ -1.32
SKP1-201ENST00000328392 AGGF1Q8N302 714 aaeCLIP6.79□□□□□ -1.32
SKP1-201ENST00000328392 TMEM102Q8N9M5 508 aaPredicted RBP6.79□□□□□ -1.32
SKP1-201ENST00000328392 MEGF10Q96KG7 1140 aa6.79□□□□□ -1.32
SKP1-201ENST00000328392 FAM129BQ96TA1 746 aa6.79□□□□□ -1.32
SKP1-201ENST00000328392 METTL12A8MUP2 240 aa6.78□□□□□ -1.32
SKP1-201ENST00000328392 F8W735 103 aaPredicted RBP6.78□□□□□ -1.32
SKP1-201ENST00000328392 IGHA2P01877 340 aa6.78□□□□□ -1.32
SKP1-201ENST00000328392 EDN3P14138 238 aa6.78□□□□□ -1.32
SKP1-201ENST00000328392 CD68P34810 354 aaPredicted RBP6.78□□□□□ -1.32
SKP1-201ENST00000328392 MAP4K3Q8IVH8 894 aa6.78□□□□□ -1.32
SKP1-201ENST00000328392 TMC1Q8TDI8 760 aa6.78□□□□□ -1.32
SKP1-201ENST00000328392 TP53INP1Q96A56 240 aa6.78□□□□□ -1.32
SKP1-201ENST00000328392 KLHDC7BQ96G42 594 aa6.78□□□□□ -1.32
SKP1-201ENST00000328392 AKTIPQ9H8T0 292 aa6.78□□□□□ -1.32
SKP1-201ENST00000328392 SRA1Q9HD15 236 aaKnown RBP6.78□□□□□ -1.32
SKP1-201ENST00000328392 SOX13Q9UN79 622 aa6.78□□□□□ -1.32
SKP1-201ENST00000328392 H3BRJ5 948 aa6.77□□□□□ -1.33
SKP1-201ENST00000328392 GPR182O15218 404 aa6.77□□□□□ -1.33
SKP1-201ENST00000328392 DYRK3O43781 588 aa6.77□□□□□ -1.33
SKP1-201ENST00000328392 ADAM11O75078 769 aa6.77□□□□□ -1.33
SKP1-201ENST00000328392 RGS22Q8NE09 1264 aa6.77□□□□□ -1.33
SKP1-201ENST00000328392 ASAP3Q8TDY4 903 aa6.77□□□□□ -1.33
SKP1-201ENST00000328392 ZNF428Q96B54 188 aa6.77□□□□□ -1.33
SKP1-201ENST00000328392 NIF3L1Q9GZT8 377 aa6.77□□□□□ -1.33
SKP1-201ENST00000328392 MRPL18Q9H0U6 180 aaKnown RBP6.77□□□□□ -1.33
SKP1-201ENST00000328392 A0A1W2PP55 124 aa6.76□□□□□ -1.33
SKP1-201ENST00000328392 FAM117BQ6P1L5 589 aa6.76□□□□□ -1.33
SKP1-201ENST00000328392 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.76□□□□□ -1.33
SKP1-201ENST00000328392 VN1R5Q7Z5H4 357 aa6.76□□□□□ -1.33
SKP1-201ENST00000328392 GALNT12Q8IXK2 581 aa6.76□□□□□ -1.33
SKP1-201ENST00000328392 TMEM130Q8N3G9 435 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms