RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 AKAP11Q9UKA4 1901 aa12.49□□□□□ -0.41
VIPAS39-201ENST00000327028 IRS2Q9Y4H2 1338 aa12.48□□□□□ -0.41
VIPAS39-201ENST00000327028 ATP2B4P23634 1241 aa12.48□□□□□ -0.41
VIPAS39-201ENST00000327028 ARID4AP29374 1257 aaPredicted RBP12.48□□□□□ -0.41
VIPAS39-201ENST00000327028 CCDC102BQ68D86 513 aa12.48□□□□□ -0.41
VIPAS39-201ENST00000327028 HAUS7Q99871 368 aa12.48□□□□□ -0.41
VIPAS39-201ENST00000327028 CDC45O75419 566 aa12.48□□□□□ -0.41
VIPAS39-201ENST00000327028 UQCRFS1P1P0C7P4 283 aa12.48□□□□□ -0.41
VIPAS39-201ENST00000327028 KCNA3P22001 575 aa12.48□□□□□ -0.41
VIPAS39-201ENST00000327028 PHKA1P46020 1223 aa12.48□□□□□ -0.41
VIPAS39-201ENST00000327028 C15orf52Q6ZUT6 534 aaKnown RBP12.48□□□□□ -0.41
VIPAS39-201ENST00000327028 CNTROBQ8N137 903 aa12.48□□□□□ -0.41
VIPAS39-201ENST00000327028 TMX4Q9H1E5 349 aaPredicted RBP12.48□□□□□ -0.41
VIPAS39-201ENST00000327028 GGA1Q9UJY5 639 aa12.48□□□□□ -0.41
VIPAS39-201ENST00000327028 TRIM6-TRIM34B2RNG4 842 aa12.47□□□□□ -0.41
VIPAS39-201ENST00000327028 NSFL1CQ9UNZ2 370 aaKnown RBP12.47□□□□□ -0.41
VIPAS39-201ENST00000327028 A0A0G2JLW4 131 aa12.47□□□□□ -0.41
VIPAS39-201ENST00000327028 WTIPA6NIX2 430 aaPredicted RBP12.47□□□□□ -0.41
VIPAS39-201ENST00000327028 UFL1O94874 794 aa12.47□□□□□ -0.41
VIPAS39-201ENST00000327028 MAP4K4O95819 1239 aaPredicted RBP12.47□□□□□ -0.41
VIPAS39-201ENST00000327028 TTLL6Q8N841 843 aa12.47□□□□□ -0.41
VIPAS39-201ENST00000327028 C7orf43Q8WVR3 580 aa12.47□□□□□ -0.41
VIPAS39-201ENST00000327028 EVI5LQ96CN4 794 aa12.47□□□□□ -0.41
VIPAS39-201ENST00000327028 MYH13Q9UKX3 1938 aa12.47□□□□□ -0.41
VIPAS39-201ENST00000327028 SNED1Q8TER0 1413 aa12.46□□□□□ -0.41
VIPAS39-201ENST00000327028 KLRK1P26718 216 aa12.46□□□□□ -0.41
VIPAS39-201ENST00000327028 CAVIN4Q5BKX8 364 aa12.46□□□□□ -0.41
VIPAS39-201ENST00000327028 CC2D2BQ6DHV5 1058 aa12.46□□□□□ -0.41
VIPAS39-201ENST00000327028 RILPL2Q969X0 211 aa12.46□□□□□ -0.41
VIPAS39-201ENST00000327028 BACH2Q9BYV9 841 aa12.46□□□□□ -0.41
VIPAS39-201ENST00000327028 MED23Q9ULK4 1368 aa12.46□□□□□ -0.41
VIPAS39-201ENST00000327028 BCAMP50895 628 aa12.46□□□□□ -0.42
VIPAS39-201ENST00000327028 MPNDQ8N594 471 aa12.46□□□□□ -0.42
VIPAS39-201ENST00000327028 TBC1D16Q8TBP0 767 aa12.46□□□□□ -0.42
VIPAS39-201ENST00000327028 DNAJC2Q99543 621 aaKnown RBP12.46□□□□□ -0.42
VIPAS39-201ENST00000327028 RFX7Q2KHR2 1363 aa12.46□□□□□ -0.42
VIPAS39-201ENST00000327028 ZBTB22O15209 634 aa12.45□□□□□ -0.42
VIPAS39-201ENST00000327028 MCAMP43121 646 aa12.45□□□□□ -0.42
VIPAS39-201ENST00000327028 GYG1P46976 350 aa12.45□□□□□ -0.42
VIPAS39-201ENST00000327028 SCARF1Q14162 830 aa12.45□□□□□ -0.42
VIPAS39-201ENST00000327028 OLFM4Q6UX06 510 aa12.45□□□□□ -0.42
VIPAS39-201ENST00000327028 FBXO33Q7Z6M2 555 aa12.45□□□□□ -0.42
VIPAS39-201ENST00000327028 FAM84BQ96KN1 310 aaPredicted RBP12.45□□□□□ -0.42
VIPAS39-201ENST00000327028 GNL3LQ9NVN8 582 aaKnown RBP12.45□□□□□ -0.42
VIPAS39-201ENST00000327028 DPP8Q6V1X1 898 aaPredicted RBP12.45□□□□□ -0.42
VIPAS39-201ENST00000327028 TBC1D9Q6ZT07 1266 aa12.45□□□□□ -0.42
VIPAS39-201ENST00000327028 PAG1Q9NWQ8 432 aa12.45□□□□□ -0.42
VIPAS39-201ENST00000327028 POLLQ9UGP5 575 aa12.45□□□□□ -0.42
VIPAS39-201ENST00000327028 RASGRF1Q13972 1273 aa12.44□□□□□ -0.42
VIPAS39-201ENST00000327028 PIM2Q9P1W9 311 aa12.44□□□□□ -0.42
VIPAS39-201ENST00000327028 PPP1R1BQ9UD71 204 aaPredicted RBP12.44□□□□□ -0.42
VIPAS39-201ENST00000327028 DOCK2Q92608 1830 aa12.44□□□□□ -0.42
VIPAS39-201ENST00000327028 SEMA3EO15041 775 aa12.44□□□□□ -0.42
VIPAS39-201ENST00000327028 HIBADHP31937 336 aaKnown RBP12.44□□□□□ -0.42
VIPAS39-201ENST00000327028 GRIPAP1Q4V328 841 aa12.44□□□□□ -0.42
VIPAS39-201ENST00000327028 CASC1Q6TDU7 716 aa12.44□□□□□ -0.42
VIPAS39-201ENST00000327028 VPS37DQ86XT2 251 aa12.44□□□□□ -0.42
VIPAS39-201ENST00000327028 KLHL34Q8N239 644 aa12.44□□□□□ -0.42
VIPAS39-201ENST00000327028 EDC3Q96F86 508 aaKnown RBP12.44□□□□□ -0.42
VIPAS39-201ENST00000327028 NDUFB9Q9Y6M9 179 aa12.44□□□□□ -0.42
VIPAS39-201ENST00000327028 COL1A1P02452 1464 aaPredicted RBP12.44□□□□□ -0.42
VIPAS39-201ENST00000327028 C6orf229H3BNL8 230 aa12.43□□□□□ -0.42
VIPAS39-201ENST00000327028 GOLIM4O00461 696 aa12.43□□□□□ -0.42
VIPAS39-201ENST00000327028 ZAP70P43403 619 aa12.43□□□□□ -0.42
VIPAS39-201ENST00000327028 ZNF804AQ7Z570 1209 aa12.43□□□□□ -0.42
VIPAS39-201ENST00000327028 TXNRD3Q86VQ6 643 aa12.43□□□□□ -0.42
VIPAS39-201ENST00000327028 TICAM2Q86XR7 235 aa12.43□□□□□ -0.42
VIPAS39-201ENST00000327028 SPATA5Q8NB90 893 aa12.43□□□□□ -0.42
VIPAS39-201ENST00000327028 GPR101Q96P66 508 aaPredicted RBP12.43□□□□□ -0.42
VIPAS39-201ENST00000327028 SNRKQ9NRH2 765 aa12.43□□□□□ -0.42
VIPAS39-201ENST00000327028 HMG20BQ9P0W2 317 aa12.43□□□□□ -0.42
VIPAS39-201ENST00000327028 MYH7P12883 1935 aa12.43□□□□□ -0.42
VIPAS39-201ENST00000327028 PDS5AQ29RF7 1337 aaKnown RBP12.43□□□□□ -0.42
VIPAS39-201ENST00000327028 FKBP4Q02790 459 aaKnown RBP eCLIP12.43□□□□□ -0.42
VIPAS39-201ENST00000327028 CCDC93Q567U6 631 aa12.43□□□□□ -0.42
VIPAS39-201ENST00000327028 PI16Q6UXB8 463 aa12.43□□□□□ -0.42
VIPAS39-201ENST00000327028 KBTBD3Q8NAB2 608 aa12.43□□□□□ -0.42
VIPAS39-201ENST00000327028 FSD1Q9BTV5 496 aa12.43□□□□□ -0.42
VIPAS39-201ENST00000327028 RTFDC1Q9BY42 306 aaPredicted RBP12.43□□□□□ -0.42
VIPAS39-201ENST00000327028 CHMLP26374 656 aa12.42□□□□□ -0.42
VIPAS39-201ENST00000327028 DALRD3Q5D0E6 543 aaKnown RBP12.42□□□□□ -0.42
VIPAS39-201ENST00000327028 SOGA3Q5TF21 947 aa12.42□□□□□ -0.42
VIPAS39-201ENST00000327028 ZNF219Q9P2Y4 722 aaPredicted RBP12.42□□□□□ -0.42
VIPAS39-201ENST00000327028 ARFGEF1Q9Y6D6 1849 aa12.42□□□□□ -0.42
VIPAS39-201ENST00000327028 HIP1O00291 1037 aa12.42□□□□□ -0.42
VIPAS39-201ENST00000327028 C21orf2O43822 256 aa12.42□□□□□ -0.42
VIPAS39-201ENST00000327028 TTF1Q15361 905 aaPredicted RBP12.42□□□□□ -0.42
VIPAS39-201ENST00000327028 EYA3Q99504 573 aa12.42□□□□□ -0.42
VIPAS39-201ENST00000327028 DENND2AQ9ULE3 1009 aa12.42□□□□□ -0.42
VIPAS39-201ENST00000327028 ANTXR1Q9H6X2 564 aa12.41□□□□□ -0.42
VIPAS39-201ENST00000327028 SOCS7O14512 581 aa12.41□□□□□ -0.42
VIPAS39-201ENST00000327028 CYP2E1P05181 493 aaPredicted RBP12.41□□□□□ -0.42
VIPAS39-201ENST00000327028 RTKN2Q8IZC4 609 aa12.41□□□□□ -0.42
VIPAS39-201ENST00000327028 SUPT20HQ8NEM7 779 aa12.41□□□□□ -0.42
VIPAS39-201ENST00000327028 DIAPH3Q9NSV4 1193 aa12.41□□□□□ -0.42
VIPAS39-201ENST00000327028 MYO5AQ9Y4I1 1855 aaKnown RBP12.41□□□□□ -0.42
VIPAS39-201ENST00000327028 EIF5BO60841 1220 aaKnown RBP12.41□□□□□ -0.42
VIPAS39-201ENST00000327028 NLGN2Q8NFZ4 835 aa12.41□□□□□ -0.42
VIPAS39-201ENST00000327028 TDRD7Q8NHU6 1098 aaKnown RBP12.41□□□□□ -0.42
VIPAS39-201ENST00000327028 IQSEC3Q9UPP2 1182 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms