RNA–Protein interactions for RNA: ENST00000325674.11

CAST-202, Transcript of calpastatin, humanhuman

TSL 5 BASIC

Gene CAST, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-202ENST00000325674 BICC1Q9H694 974 aaKnown RBP8.13□□□□□ -1.11
CAST-202ENST00000325674 DDX20Q9UHI6 824 aaKnown RBP8.13□□□□□ -1.11
CAST-202ENST00000325674 KIAA0232Q92628 1395 aa8.13□□□□□ -1.11
CAST-202ENST00000325674 SDSP20132 328 aa8.13□□□□□ -1.11
CAST-202ENST00000325674 RASA3Q14644 834 aa8.13□□□□□ -1.11
CAST-202ENST00000325674 TPRNQ4KMQ1 711 aa8.13□□□□□ -1.11
CAST-202ENST00000325674 ARMCX5Q6P1M9 558 aa8.13□□□□□ -1.11
CAST-202ENST00000325674 TMTC2Q8N394 836 aa8.13□□□□□ -1.11
CAST-202ENST00000325674 BCL2L13Q9BXK5 485 aa8.13□□□□□ -1.11
CAST-202ENST00000325674 NUP62CLQ9H1M0 184 aa8.13□□□□□ -1.11
CAST-202ENST00000325674 CPSF1Q10570 1443 aaKnown RBP8.12□□□□□ -1.11
CAST-202ENST00000325674 N4BP1O75113 896 aaKnown RBP8.12□□□□□ -1.11
CAST-202ENST00000325674 CDKL5O76039 1030 aa8.12□□□□□ -1.11
CAST-202ENST00000325674 LIG3P49916 1009 aa8.12□□□□□ -1.11
CAST-202ENST00000325674 MFN1Q8IWA4 741 aa8.12□□□□□ -1.11
CAST-202ENST00000325674 DHX40Q8IX18 779 aaKnown RBP8.12□□□□□ -1.11
CAST-202ENST00000325674 CEP112Q8N8E3 955 aa8.12□□□□□ -1.11
CAST-202ENST00000325674 C3orf20Q8ND61 904 aa8.12□□□□□ -1.11
CAST-202ENST00000325674 MAF1Q9H063 256 aa8.12□□□□□ -1.11
CAST-202ENST00000325674 SUN2Q9UH99 717 aa8.12□□□□□ -1.11
CAST-202ENST00000325674 NOB1Q9ULX3 412 aaKnown RBP8.12□□□□□ -1.11
CAST-202ENST00000325674 GIGYF1O75420 1035 aaPredicted RBP8.12□□□□□ -1.11
CAST-202ENST00000325674 G3BP1Q13283 466 aaKnown RBP eCLIP8.12□□□□□ -1.11
CAST-202ENST00000325674 DRP2Q13474 957 aa8.12□□□□□ -1.11
CAST-202ENST00000325674 CARD6Q9BX69 1037 aa8.12□□□□□ -1.11
CAST-202ENST00000325674 CD248Q9HCU0 757 aa8.12□□□□□ -1.11
CAST-202ENST00000325674 RPGRIP1LQ68CZ1 1315 aa8.12□□□□□ -1.11
CAST-202ENST00000325674 NUP153P49790 1475 aaKnown RBP8.11□□□□□ -1.11
CAST-202ENST00000325674 STX6O43752 255 aa8.11□□□□□ -1.11
CAST-202ENST00000325674 TUBBP07437 444 aa8.11□□□□□ -1.11
CAST-202ENST00000325674 SETSIPP0DME0 302 aa8.11□□□□□ -1.11
CAST-202ENST00000325674 EMC10Q5UCC4 262 aa8.11□□□□□ -1.11
CAST-202ENST00000325674 DDX46Q7L014 1031 aaKnown RBP8.11□□□□□ -1.11
CAST-202ENST00000325674 SDR16C5Q8N3Y7 309 aa8.11□□□□□ -1.11
CAST-202ENST00000325674 BPIFA3Q9BQP9 254 aa8.11□□□□□ -1.11
CAST-202ENST00000325674 VCPKMTQ9H867 229 aa8.11□□□□□ -1.11
CAST-202ENST00000325674 CPSF2Q9P2I0 782 aaKnown RBP8.11□□□□□ -1.11
CAST-202ENST00000325674 MTMR6Q9Y217 621 aa8.11□□□□□ -1.11
CAST-202ENST00000325674 ITSN1Q15811 1721 aa8.11□□□□□ -1.11
CAST-202ENST00000325674 GORABQ5T7V8 394 aa8.11□□□□□ -1.11
CAST-202ENST00000325674 HOOK2Q96ED9 719 aa8.11□□□□□ -1.11
CAST-202ENST00000325674 SENP2Q9HC62 589 aa8.11□□□□□ -1.11
CAST-202ENST00000325674 NUB1Q9Y5A7 615 aa8.11□□□□□ -1.11
CAST-202ENST00000325674 CEMIPQ8WUJ3 1361 aa8.11□□□□□ -1.11
CAST-202ENST00000325674 PLCH2O75038 1416 aa8.11□□□□□ -1.11
CAST-202ENST00000325674 VWDEQ8N2E2 1590 aa8.11□□□□□ -1.11
CAST-202ENST00000325674 VWA3AA6NCI4 1184 aa8.11□□□□□ -1.11
CAST-202ENST00000325674 SRRM3A6NNA2 597 aaPredicted RBP8.11□□□□□ -1.11
CAST-202ENST00000325674 ANKRD65E5RJM6 399 aa8.11□□□□□ -1.11
CAST-202ENST00000325674 SMNDC1O75940 238 aaKnown RBP eCLIP8.11□□□□□ -1.11
CAST-202ENST00000325674 WDR93Q6P2C0 686 aa8.11□□□□□ -1.11
CAST-202ENST00000325674 SPATA21Q7Z572 469 aa8.11□□□□□ -1.11
CAST-202ENST00000325674 PABPN1Q86U42 306 aaKnown RBP eCLIP8.11□□□□□ -1.11
CAST-202ENST00000325674 DZIP3Q86Y13 1208 aaKnown RBP8.11□□□□□ -1.11
CAST-202ENST00000325674 GOLGA1Q92805 767 aa8.11□□□□□ -1.11
CAST-202ENST00000325674 SH3GL2Q99962 352 aa8.11□□□□□ -1.11
CAST-202ENST00000325674 LZTS2Q9BRK4 669 aa8.11□□□□□ -1.11
CAST-202ENST00000325674 CRACR2AQ9BSW2 395 aa8.11□□□□□ -1.11
CAST-202ENST00000325674 EBF2Q9HAK2 575 aa8.11□□□□□ -1.11
CAST-202ENST00000325674 KIF9Q9HAQ2 790 aa8.11□□□□□ -1.11
CAST-202ENST00000325674 KDM6AO15550 1401 aaPredicted RBP8.11□□□□□ -1.11
CAST-202ENST00000325674 DEPDC5O75140 1603 aa8.1□□□□□ -1.11
CAST-202ENST00000325674 INPP5BP32019 993 aa8.1□□□□□ -1.11
CAST-202ENST00000325674 GCLCP48506 637 aaPredicted RBP8.1□□□□□ -1.11
CAST-202ENST00000325674 ZNF165P49910 485 aa8.1□□□□□ -1.11
CAST-202ENST00000325674 NEK4P51957 841 aa8.1□□□□□ -1.11
CAST-202ENST00000325674 CWF19L1Q69YN2 538 aaKnown RBP8.1□□□□□ -1.11
CAST-202ENST00000325674 TMEM139Q8IV31 216 aa8.1□□□□□ -1.11
CAST-202ENST00000325674 CCDC50Q8IVM0 306 aa8.1□□□□□ -1.11
CAST-202ENST00000325674 FAM204AQ9H8W3 233 aa8.1□□□□□ -1.11
CAST-202ENST00000325674 BIN1O00499 593 aa8.1□□□□□ -1.11
CAST-202ENST00000325674 MIS18BP1Q6P0N0 1132 aa8.1□□□□□ -1.11
CAST-202ENST00000325674 MTHFD1LQ6UB35 978 aa8.1□□□□□ -1.11
CAST-202ENST00000325674 RPUSD2Q8IZ73 545 aaKnown RBP8.1□□□□□ -1.11
CAST-202ENST00000325674 KLC4Q9NSK0 619 aa8.1□□□□□ -1.11
CAST-202ENST00000325674 TRMT1Q9NXH9 659 aaKnown RBP8.1□□□□□ -1.11
CAST-202ENST00000325674 CORO1CQ9ULV4 474 aaPredicted RBP8.1□□□□□ -1.11
CAST-202ENST00000325674 PCDHGC5Q9Y5F6 944 aa8.1□□□□□ -1.11
CAST-202ENST00000325674 MRC2Q9UBG0 1479 aa8.1□□□□□ -1.11
CAST-202ENST00000325674 ERICH2A1L162 156 aa8.1□□□□□ -1.11
CAST-202ENST00000325674 MGRN1O60291 552 aa8.1□□□□□ -1.11
CAST-202ENST00000325674 AMPHP49418 695 aa8.1□□□□□ -1.11
CAST-202ENST00000325674 PPP2R3AQ06190 1150 aa8.1□□□□□ -1.11
CAST-202ENST00000325674 ACTN3Q08043 901 aaPredicted RBP8.1□□□□□ -1.11
CAST-202ENST00000325674 TAX1BP1Q86VP1 789 aa8.1□□□□□ -1.11
CAST-202ENST00000325674 RTEL1Q9NZ71 1219 aa8.1□□□□□ -1.11
CAST-202ENST00000325674 SH3TC1Q8TE82 1336 aa8.1□□□□□ -1.11
CAST-202ENST00000325674 NUP155O75694 1391 aa8.1□□□□□ -1.11
CAST-202ENST00000325674 MAGI1Q96QZ7 1491 aaPredicted RBP8.1□□□□□ -1.11
CAST-202ENST00000325674 SPDYE3A6NKU9 549 aa8.09□□□□□ -1.11
CAST-202ENST00000325674 NBPF7P0C2Y1 421 aaPredicted RBP8.09□□□□□ -1.11
CAST-202ENST00000325674 PYGBP11216 843 aa8.09□□□□□ -1.11
CAST-202ENST00000325674 PSMD2Q13200 908 aa8.09□□□□□ -1.11
CAST-202ENST00000325674 TTC6Q86TZ1 520 aa8.09□□□□□ -1.11
CAST-202ENST00000325674 AFAP1L1Q8TED9 768 aa8.09□□□□□ -1.11
CAST-202ENST00000325674 LMBR1Q8WVP7 490 aa8.09□□□□□ -1.11
CAST-202ENST00000325674 EZH1Q92800 747 aaPredicted RBP8.09□□□□□ -1.11
CAST-202ENST00000325674 PLEKHF1Q96S99 279 aa8.09□□□□□ -1.11
CAST-202ENST00000325674 A6NHS1 94 aa8.09□□□□□ -1.11
CAST-202ENST00000325674 NPHP1O15259 732 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms