RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 PPP1R13BQ96KQ4 1090 aa16.5■□□□□ 0.23
PABPC1-201ENST00000318607 IRX2Q9BZI1 471 aaPredicted RBP16.5■□□□□ 0.23
PABPC1-201ENST00000318607 PCDHA7Q9UN72 937 aa16.5■□□□□ 0.23
PABPC1-201ENST00000318607 ADKP55263 362 aaKnown RBP16.5■□□□□ 0.23
PABPC1-201ENST00000318607 CCZ1BP86790 482 aa16.5■□□□□ 0.23
PABPC1-201ENST00000318607 CCZ1P86791 482 aaPredicted RBP16.5■□□□□ 0.23
PABPC1-201ENST00000318607 POLA2Q14181 598 aa16.5■□□□□ 0.23
PABPC1-201ENST00000318607 COPS6Q7L5N1 327 aa16.5■□□□□ 0.23
PABPC1-201ENST00000318607 GPIHBP1Q8IV16 184 aa16.5■□□□□ 0.23
PABPC1-201ENST00000318607 TRMT44Q8IYL2 757 aaKnown RBP16.5■□□□□ 0.23
PABPC1-201ENST00000318607 CHD2O14647 1828 aaKnown RBP16.5■□□□□ 0.23
PABPC1-201ENST00000318607 TAF5LO75529 589 aa16.5■□□□□ 0.23
PABPC1-201ENST00000318607 UBASH3AP57075 661 aa16.5■□□□□ 0.23
PABPC1-201ENST00000318607 ZC3H6P61129 1189 aaKnown RBP16.5■□□□□ 0.23
PABPC1-201ENST00000318607 TPM4P67936 248 aa16.5■□□□□ 0.23
PABPC1-201ENST00000318607 RESTQ13127 1097 aa16.5■□□□□ 0.23
PABPC1-201ENST00000318607 E4F1Q66K89 784 aaPredicted RBP16.5■□□□□ 0.23
PABPC1-201ENST00000318607 DBF4Q9UBU7 674 aaPredicted RBP16.5■□□□□ 0.23
PABPC1-201ENST00000318607 TFRCP02786 760 aaKnown RBP16.49■□□□□ 0.23
PABPC1-201ENST00000318607 EVCP57679 992 aa16.49■□□□□ 0.23
PABPC1-201ENST00000318607 ZNF594Q96JF6 807 aaPredicted RBP16.49■□□□□ 0.23
PABPC1-201ENST00000318607 EID1Q9Y6B2 187 aa16.49■□□□□ 0.23
PABPC1-201ENST00000318607 GABPB1Q06547 395 aaPredicted RBP16.49■□□□□ 0.23
PABPC1-201ENST00000318607 LONRF3Q496Y0 759 aa16.49■□□□□ 0.23
PABPC1-201ENST00000318607 FKBP15Q5T1M5 1219 aa16.49■□□□□ 0.23
PABPC1-201ENST00000318607 ARMCX5Q6P1M9 558 aa16.49■□□□□ 0.23
PABPC1-201ENST00000318607 DHX40Q8IX18 779 aaKnown RBP16.49■□□□□ 0.23
PABPC1-201ENST00000318607 XAGE3Q8WTP9 111 aa16.49■□□□□ 0.23
PABPC1-201ENST00000318607 C8orf76Q96K31 380 aa16.49■□□□□ 0.23
PABPC1-201ENST00000318607 ARGLU1Q9NWB6 273 aaPredicted RBP16.49■□□□□ 0.23
PABPC1-201ENST00000318607 SSH2Q76I76 1423 aa16.48■□□□□ 0.23
PABPC1-201ENST00000318607 SRCAPQ6ZRS2 3230 aa16.48■□□□□ 0.23
PABPC1-201ENST00000318607 TMEM232C9JQI7 657 aa16.48■□□□□ 0.23
PABPC1-201ENST00000318607 TRIM66O15016 1216 aa16.48■□□□□ 0.23
PABPC1-201ENST00000318607 DPF2Q92785 391 aa16.48■□□□□ 0.23
PABPC1-201ENST00000318607 ZNF396Q96N95 335 aaPredicted RBP16.48■□□□□ 0.23
PABPC1-201ENST00000318607 CLIC6Q96NY7 704 aa16.48■□□□□ 0.23
PABPC1-201ENST00000318607 PHRF1Q9P1Y6 1649 aaKnown RBP16.48■□□□□ 0.23
PABPC1-201ENST00000318607 TTC41PQ6P2S7 1318 aa16.48■□□□□ 0.23
PABPC1-201ENST00000318607 ERC1Q8IUD2 1116 aa16.48■□□□□ 0.23
PABPC1-201ENST00000318607 MRPS27Q92552 414 aaKnown RBP16.48■□□□□ 0.23
PABPC1-201ENST00000318607 MYL10Q9BUA6 226 aa16.48■□□□□ 0.23
PABPC1-201ENST00000318607 DBNLQ9UJU6 430 aaKnown RBP16.48■□□□□ 0.23
PABPC1-201ENST00000318607 MORC2Q9Y6X9 1032 aaPredicted RBP16.48■□□□□ 0.23
PABPC1-201ENST00000318607 IBSPP21815 317 aaPredicted RBP16.47■□□□□ 0.23
PABPC1-201ENST00000318607 PSME1Q06323 249 aa16.47■□□□□ 0.23
PABPC1-201ENST00000318607 STOX1Q6ZVD7 989 aa16.47■□□□□ 0.23
PABPC1-201ENST00000318607 ORC3Q9UBD5 711 aaPredicted RBP16.47■□□□□ 0.23
PABPC1-201ENST00000318607 ATP7BP35670 1465 aa16.47■□□□□ 0.23
PABPC1-201ENST00000318607 GOLGA8BA8MQT2 603 aa16.47■□□□□ 0.23
PABPC1-201ENST00000318607 PNMA6AP0CW24 399 aaPredicted RBP16.47■□□□□ 0.23
PABPC1-201ENST00000318607 FAM160A1Q05DH4 1040 aa16.47■□□□□ 0.23
PABPC1-201ENST00000318607 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.47■□□□□ 0.23
PABPC1-201ENST00000318607 CSB-PGBD3P0DP91 1061 aa16.47■□□□□ 0.23
PABPC1-201ENST00000318607 FAM193AP78312 1265 aa16.47■□□□□ 0.23
PABPC1-201ENST00000318607 PNOCQ13519 176 aa16.47■□□□□ 0.23
PABPC1-201ENST00000318607 TOP1P11387 765 aaKnown RBP16.46■□□□□ 0.23
PABPC1-201ENST00000318607 STX17P56962 302 aa16.46■□□□□ 0.23
PABPC1-201ENST00000318607 ESCO1Q5FWF5 840 aa16.46■□□□□ 0.23
PABPC1-201ENST00000318607 CCDC191Q8NCU4 936 aa16.46■□□□□ 0.23
PABPC1-201ENST00000318607 ROBO2Q9HCK4 1378 aa16.46■□□□□ 0.23
PABPC1-201ENST00000318607 A0A087WZG4 1122 aa16.46■□□□□ 0.23
PABPC1-201ENST00000318607 RHOXF2BP0C7M4 288 aa16.46■□□□□ 0.23
PABPC1-201ENST00000318607 OAS2P29728 719 aaKnown RBP16.46■□□□□ 0.23
PABPC1-201ENST00000318607 RHOXF2Q9BQY4 288 aa16.46■□□□□ 0.23
PABPC1-201ENST00000318607 SRRTQ9BXP5 876 aaKnown RBP16.46■□□□□ 0.23
PABPC1-201ENST00000318607 NRKQ7Z2Y5 1582 aa16.46■□□□□ 0.23
PABPC1-201ENST00000318607 FANCCQ00597 558 aa16.46■□□□□ 0.22
PABPC1-201ENST00000318607 RRP12Q5JTH9 1297 aaKnown RBP16.46■□□□□ 0.22
PABPC1-201ENST00000318607 PHKBQ93100 1093 aa16.46■□□□□ 0.22
PABPC1-201ENST00000318607 TM6SF1Q9BZW5 370 aa16.46■□□□□ 0.22
PABPC1-201ENST00000318607 NLRP2Q9NX02 1062 aa16.46■□□□□ 0.22
PABPC1-201ENST00000318607 CALCOCO1Q9P1Z2 691 aa16.46■□□□□ 0.22
PABPC1-201ENST00000318607 CPSF1Q10570 1443 aaKnown RBP16.45■□□□□ 0.22
PABPC1-201ENST00000318607 KLF18A0A0U1RQI7 1052 aa16.45■□□□□ 0.22
PABPC1-201ENST00000318607 MTX1Q13505 466 aa16.45■□□□□ 0.22
PABPC1-201ENST00000318607 KSR2Q6VAB6 950 aa16.45■□□□□ 0.22
PABPC1-201ENST00000318607 MICU3Q86XE3 530 aa16.45■□□□□ 0.22
PABPC1-201ENST00000318607 CDK12Q9NYV4 1490 aaPredicted RBP16.45■□□□□ 0.22
PABPC1-201ENST00000318607 TTC21AQ8NDW8 1320 aa16.45■□□□□ 0.22
PABPC1-201ENST00000318607 LTKP29376 864 aa16.45■□□□□ 0.22
PABPC1-201ENST00000318607 NSUN7Q8NE18 718 aaKnown RBP16.45■□□□□ 0.22
PABPC1-201ENST00000318607 MAP3K5Q99683 1374 aa16.45■□□□□ 0.22
PABPC1-201ENST00000318607 HIP1O00291 1037 aa16.44■□□□□ 0.22
PABPC1-201ENST00000318607 DDX58O95786 925 aaKnown RBP16.44■□□□□ 0.22
PABPC1-201ENST00000318607 LMBR1LQ6UX01 489 aa16.44■□□□□ 0.22
PABPC1-201ENST00000318607 CMTR1Q8N1G2 835 aaKnown RBP16.44■□□□□ 0.22
PABPC1-201ENST00000318607 CCDC12Q8WUD4 166 aaPredicted RBP16.44■□□□□ 0.22
PABPC1-201ENST00000318607 CCDC102AQ96A19 550 aa16.44■□□□□ 0.22
PABPC1-201ENST00000318607 CRYBG1Q9Y4K1 1723 aa16.44■□□□□ 0.22
PABPC1-201ENST00000318607 ZNF202O95125 648 aa16.44■□□□□ 0.22
PABPC1-201ENST00000318607 NFXL1Q6ZNB6 911 aa16.44■□□□□ 0.22
PABPC1-201ENST00000318607 SMARCE1Q969G3 411 aa16.44■□□□□ 0.22
PABPC1-201ENST00000318607 FLT4P35916 1363 aa16.44■□□□□ 0.22
PABPC1-201ENST00000318607 XIRP1Q702N8 1843 aaKnown RBP16.44■□□□□ 0.22
PABPC1-201ENST00000318607 AKAP12Q02952 1782 aa16.44■□□□□ 0.22
PABPC1-201ENST00000318607 UBE2Q2LH0YL09 131 aa16.44■□□□□ 0.22
PABPC1-201ENST00000318607 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.44■□□□□ 0.22
PABPC1-201ENST00000318607 SPTLC2O15270 562 aa16.43■□□□□ 0.22
PABPC1-201ENST00000318607 GRAMD1CQ8IYS0 662 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms