RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 NDUFB9Q9Y6M9 179 aa18.9■□□□□ 0.62
USH1C-202ENST00000318024 ANKRD18BA2A2Z9 1011 aa18.9■□□□□ 0.62
USH1C-202ENST00000318024 TRAPPC3LQ5T215 181 aa18.9■□□□□ 0.62
USH1C-202ENST00000318024 LDHAL6AQ6ZMR3 332 aa18.9■□□□□ 0.62
USH1C-202ENST00000318024 ANKRD36CQ5JPF3 1778 aa18.89■□□□□ 0.62
USH1C-202ENST00000318024 LETM1O95202 739 aaPredicted RBP18.89■□□□□ 0.61
USH1C-202ENST00000318024 RFC4P35249 363 aa18.89■□□□□ 0.61
USH1C-202ENST00000318024 FOXD4L6Q3SYB3 417 aaPredicted RBP18.89■□□□□ 0.61
USH1C-202ENST00000318024 FOXD4L3Q6VB84 417 aaPredicted RBP18.89■□□□□ 0.61
USH1C-202ENST00000318024 CNTROBQ8N137 903 aa18.89■□□□□ 0.61
USH1C-202ENST00000318024 PROM2Q8N271 834 aa18.89■□□□□ 0.61
USH1C-202ENST00000318024 CCDC24Q8N4L8 307 aa18.89■□□□□ 0.61
USH1C-202ENST00000318024 TTC12Q9H892 705 aaPredicted RBP18.89■□□□□ 0.61
USH1C-202ENST00000318024 CNPY2Q9Y2B0 182 aa18.89■□□□□ 0.61
USH1C-202ENST00000318024 ZNF831Q5JPB2 1677 aa18.89■□□□□ 0.61
USH1C-202ENST00000318024 ZSCAN22P10073 491 aaPredicted RBP18.89■□□□□ 0.61
USH1C-202ENST00000318024 UBE2HP62256 183 aa18.89■□□□□ 0.61
USH1C-202ENST00000318024 ERFEQ4G0M1 354 aa18.89■□□□□ 0.61
USH1C-202ENST00000318024 POTEAQ6S8J7 498 aa18.89■□□□□ 0.61
USH1C-202ENST00000318024 SEC31BQ9NQW1 1179 aa18.89■□□□□ 0.61
USH1C-202ENST00000318024 CEP126Q9P2H0 1117 aa18.89■□□□□ 0.61
USH1C-202ENST00000318024 RAD50Q92878 1312 aa18.89■□□□□ 0.61
USH1C-202ENST00000318024 KDM4AO75164 1064 aa18.88■□□□□ 0.61
USH1C-202ENST00000318024 CIAO1O76071 339 aa18.88■□□□□ 0.61
USH1C-202ENST00000318024 GTF2E1P29083 439 aaPredicted RBP18.88■□□□□ 0.61
USH1C-202ENST00000318024 EDC3Q96F86 508 aaKnown RBP18.88■□□□□ 0.61
USH1C-202ENST00000318024 CNNM1Q9NRU3 951 aa18.88■□□□□ 0.61
USH1C-202ENST00000318024 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.87■□□□□ 0.61
USH1C-202ENST00000318024 MPNDQ8N594 471 aa18.87■□□□□ 0.61
USH1C-202ENST00000318024 SETDB2Q96T68 719 aa18.87■□□□□ 0.61
USH1C-202ENST00000318024 SNX14Q9Y5W7 946 aa18.87■□□□□ 0.61
USH1C-202ENST00000318024 A0A1B0GUL7 405 aa18.86■□□□□ 0.61
USH1C-202ENST00000318024 SGSM2O43147 1006 aa18.86■□□□□ 0.61
USH1C-202ENST00000318024 AP5Z1O43299 807 aa18.86■□□□□ 0.61
USH1C-202ENST00000318024 APBA3O96018 575 aa18.86■□□□□ 0.61
USH1C-202ENST00000318024 TXNRD1Q16881 649 aa18.86■□□□□ 0.61
USH1C-202ENST00000318024 C17orf53Q8N3J3 647 aaPredicted RBP18.86■□□□□ 0.61
USH1C-202ENST00000318024 TSC1Q92574 1164 aa18.86■□□□□ 0.61
USH1C-202ENST00000318024 LY75O60449 1722 aa18.86■□□□□ 0.61
USH1C-202ENST00000318024 SYT1P21579 422 aa18.86■□□□□ 0.61
USH1C-202ENST00000318024 C3orf67Q6ZVT6 689 aa18.86■□□□□ 0.61
USH1C-202ENST00000318024 LSG1Q9H089 658 aaKnown RBP18.86■□□□□ 0.61
USH1C-202ENST00000318024 RIPOR2Q9Y4F9 1068 aa18.86■□□□□ 0.61
USH1C-202ENST00000318024 METTL24Q5JXM2 366 aa18.85■□□□□ 0.61
USH1C-202ENST00000318024 CWC27Q6UX04 472 aaKnown RBP18.85■□□□□ 0.61
USH1C-202ENST00000318024 RUFY3Q7L099 469 aa18.85■□□□□ 0.61
USH1C-202ENST00000318024 STX6O43752 255 aa18.85■□□□□ 0.61
USH1C-202ENST00000318024 ZSCAN20P17040 1043 aaPredicted RBP18.85■□□□□ 0.61
USH1C-202ENST00000318024 SLC27A3Q5K4L6 730 aa18.85■□□□□ 0.61
USH1C-202ENST00000318024 UTP14CQ5TAP6 766 aaKnown RBP18.85■□□□□ 0.61
USH1C-202ENST00000318024 HELBQ8NG08 1087 aaPredicted RBP18.85■□□□□ 0.61
USH1C-202ENST00000318024 F13A1P00488 732 aa18.84■□□□□ 0.61
USH1C-202ENST00000318024 NBPF5PQ86XG9 351 aaPredicted RBP18.84■□□□□ 0.61
USH1C-202ENST00000318024 RASEFQ8IZ41 740 aa18.84■□□□□ 0.61
USH1C-202ENST00000318024 KIAA1524Q8TCG1 905 aa18.84■□□□□ 0.61
USH1C-202ENST00000318024 FBXO41Q8TF61 875 aa18.84■□□□□ 0.61
USH1C-202ENST00000318024 DNAJC2Q99543 621 aaKnown RBP18.84■□□□□ 0.61
USH1C-202ENST00000318024 C4BP0C0L5 1744 aa18.84■□□□□ 0.61
USH1C-202ENST00000318024 ADORA1P30542 326 aa18.84■□□□□ 0.61
USH1C-202ENST00000318024 AK2P54819 239 aa18.84■□□□□ 0.61
USH1C-202ENST00000318024 EVI5LQ96CN4 794 aa18.84■□□□□ 0.61
USH1C-202ENST00000318024 KCNF1Q9H3M0 494 aa18.84■□□□□ 0.61
USH1C-202ENST00000318024 ATP5JP18859 108 aa18.83■□□□□ 0.6
USH1C-202ENST00000318024 CCDC152Q4G0S7 254 aa18.83■□□□□ 0.6
USH1C-202ENST00000318024 DNTTIP2Q5QJE6 756 aaKnown RBP18.83■□□□□ 0.6
USH1C-202ENST00000318024 GPR108Q9NPR9 543 aa18.83■□□□□ 0.6
USH1C-202ENST00000318024 DMTNQ08495 405 aa18.82■□□□□ 0.6
USH1C-202ENST00000318024 FBXO3Q9UK99 471 aa18.82■□□□□ 0.6
USH1C-202ENST00000318024 LIMCH1Q9UPQ0 1083 aa18.82■□□□□ 0.6
USH1C-202ENST00000318024 TAF1LQ8IZX4 1826 aa18.82■□□□□ 0.6
USH1C-202ENST00000318024 SNAP23O00161 211 aa18.81■□□□□ 0.6
USH1C-202ENST00000318024 NPHP1O15259 732 aa18.81■□□□□ 0.6
USH1C-202ENST00000318024 XAGE2Q96GT9 111 aa18.81■□□□□ 0.6
USH1C-202ENST00000318024 MPHOSPH8Q99549 860 aa18.81■□□□□ 0.6
USH1C-202ENST00000318024 ARID3AQ99856 593 aa18.81■□□□□ 0.6
USH1C-202ENST00000318024 DIAPH3Q9NSV4 1193 aa18.81■□□□□ 0.6
USH1C-202ENST00000318024 GORABQ5T7V8 394 aa18.81■□□□□ 0.6
USH1C-202ENST00000318024 FSD1Q9BTV5 496 aa18.81■□□□□ 0.6
USH1C-202ENST00000318024 KIF3AQ9Y496 699 aa18.81■□□□□ 0.6
USH1C-202ENST00000318024 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.81■□□□□ 0.6
USH1C-202ENST00000318024 BCORQ6W2J9 1755 aa18.81■□□□□ 0.6
USH1C-202ENST00000318024 ABCC12Q96J65 1359 aa18.8■□□□□ 0.6
USH1C-202ENST00000318024 ZNF609O15014 1411 aa18.8■□□□□ 0.6
USH1C-202ENST00000318024 TAF5LO75529 589 aa18.8■□□□□ 0.6
USH1C-202ENST00000318024 LARGE1O95461 756 aa18.8■□□□□ 0.6
USH1C-202ENST00000318024 CHGBP05060 677 aa18.8■□□□□ 0.6
USH1C-202ENST00000318024 DDX46Q7L014 1031 aaKnown RBP18.8■□□□□ 0.6
USH1C-202ENST00000318024 MTMR6Q9Y217 621 aa18.8■□□□□ 0.6
USH1C-202ENST00000318024 AKAP2Q9Y2D5 859 aa18.8■□□□□ 0.6
USH1C-202ENST00000318024 HSP90B1P14625 803 aaKnown RBP18.8■□□□□ 0.6
USH1C-202ENST00000318024 NFIXQ14938 502 aa18.8■□□□□ 0.6
USH1C-202ENST00000318024 GIMAP6Q6P9H5 292 aa18.8■□□□□ 0.6
USH1C-202ENST00000318024 TPTE2Q6XPS3 522 aa18.8■□□□□ 0.6
USH1C-202ENST00000318024 PYCARDQ9ULZ3 195 aa18.8■□□□□ 0.6
USH1C-202ENST00000318024 RIC1Q4ADV7 1423 aa18.79■□□□□ 0.6
USH1C-202ENST00000318024 ATP2B3Q16720 1220 aa18.79■□□□□ 0.6
USH1C-202ENST00000318024 KCNB2Q92953 911 aa18.79■□□□□ 0.6
USH1C-202ENST00000318024 FAM227BQ96M60 508 aa18.79■□□□□ 0.6
USH1C-202ENST00000318024 PDE8BO95263 885 aa18.78■□□□□ 0.6
USH1C-202ENST00000318024 ST3GAL1Q11201 340 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms