RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 ZNF274Q96GC6 653 aaPredicted RBP22.35■■□□□ 1.17
RTN4-201ENST00000317610 TMEM94Q12767 1356 aa22.35■■□□□ 1.17
RTN4-201ENST00000317610 SNRPA1P09661 255 aaKnown RBP22.35■■□□□ 1.17
RTN4-201ENST00000317610 SKILP12757 684 aa22.35■■□□□ 1.17
RTN4-201ENST00000317610 PHKG2P15735 406 aa22.35■■□□□ 1.17
RTN4-201ENST00000317610 ZMYM1Q5SVZ6 1142 aa22.35■■□□□ 1.17
RTN4-201ENST00000317610 MST1RQ04912 1400 aa22.34■■□□□ 1.17
RTN4-201ENST00000317610 CCDC69A6NI79 296 aa22.34■■□□□ 1.17
RTN4-201ENST00000317610 USP27XA6NNY8 438 aa22.34■■□□□ 1.17
RTN4-201ENST00000317610 KIF20AO95235 890 aa22.34■■□□□ 1.17
RTN4-201ENST00000317610 CEP57L1Q8IYX8 460 aa22.34■■□□□ 1.17
RTN4-201ENST00000317610 FBXL16Q8N461 479 aa22.34■■□□□ 1.17
RTN4-201ENST00000317610 FSIP1Q8NA03 581 aa22.34■■□□□ 1.17
RTN4-201ENST00000317610 NFATC2IPQ8NCF5 419 aa22.34■■□□□ 1.17
RTN4-201ENST00000317610 GPR108Q9NPR9 543 aa22.34■■□□□ 1.17
RTN4-201ENST00000317610 ZHX1Q9UKY1 873 aaPredicted RBP22.34■■□□□ 1.17
RTN4-201ENST00000317610 SPEF2Q9C093 1822 aa22.34■■□□□ 1.17
RTN4-201ENST00000317610 KIF1AQ12756 1690 aa22.34■■□□□ 1.17
RTN4-201ENST00000317610 FMR1NBQ8N0W7 255 aaPredicted RBP22.34■■□□□ 1.17
RTN4-201ENST00000317610 ORAI2Q96SN7 254 aa22.34■■□□□ 1.17
RTN4-201ENST00000317610 USP16Q9Y5T5 823 aa22.34■■□□□ 1.17
RTN4-201ENST00000317610 PDIA3P30101 505 aaKnown RBP22.33■■□□□ 1.17
RTN4-201ENST00000317610 PTPN14Q15678 1187 aa22.33■■□□□ 1.17
RTN4-201ENST00000317610 PAG1Q9NWQ8 432 aa22.33■■□□□ 1.17
RTN4-201ENST00000317610 A0A087WZG4 1122 aa22.32■■□□□ 1.16
RTN4-201ENST00000317610 E7EWF7 191 aa22.32■■□□□ 1.16
RTN4-201ENST00000317610 ANKLE2Q86XL3 938 aa22.32■■□□□ 1.16
RTN4-201ENST00000317610 RTEL1Q9NZ71 1219 aa22.32■■□□□ 1.16
RTN4-201ENST00000317610 DDX41Q9UJV9 622 aaKnown RBP22.32■■□□□ 1.16
RTN4-201ENST00000317610 CARMIL3Q8ND23 1372 aa22.32■■□□□ 1.16
RTN4-201ENST00000317610 LAMB4A4D0S4 1761 aa22.32■■□□□ 1.16
RTN4-201ENST00000317610 A0A1W2PQ27 194 aa22.32■■□□□ 1.16
RTN4-201ENST00000317610 A0A1W2PQ64 194 aa22.32■■□□□ 1.16
RTN4-201ENST00000317610 A0A1W2PQD8 194 aa22.32■■□□□ 1.16
RTN4-201ENST00000317610 EVCP57679 992 aa22.32■■□□□ 1.16
RTN4-201ENST00000317610 CCT2P78371 535 aaKnown RBP22.32■■□□□ 1.16
RTN4-201ENST00000317610 NAA30Q147X3 362 aaPredicted RBP22.32■■□□□ 1.16
RTN4-201ENST00000317610 RAPGEF4Q8WZA2 1011 aa22.32■■□□□ 1.16
RTN4-201ENST00000317610 NAT10Q9H0A0 1025 aaKnown RBP22.32■■□□□ 1.16
RTN4-201ENST00000317610 OSBPL5Q9H0X9 879 aaPredicted RBP22.32■■□□□ 1.16
RTN4-201ENST00000317610 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.32■■□□□ 1.16
RTN4-201ENST00000317610 GLI3P10071 1580 aa22.32■■□□□ 1.16
RTN4-201ENST00000317610 HSPD1P10809 573 aaKnown RBP22.31■■□□□ 1.16
RTN4-201ENST00000317610 FOSBP53539 338 aa22.31■■□□□ 1.16
RTN4-201ENST00000317610 GSDMDP57764 484 aa22.31■■□□□ 1.16
RTN4-201ENST00000317610 CCAR2Q8N163 923 aaKnown RBP22.31■■□□□ 1.16
RTN4-201ENST00000317610 MRPS27Q92552 414 aaKnown RBP22.31■■□□□ 1.16
RTN4-201ENST00000317610 GOLIM4O00461 696 aa22.31■■□□□ 1.16
RTN4-201ENST00000317610 ME1P48163 572 aa22.31■■□□□ 1.16
RTN4-201ENST00000317610 FOXO4P98177 505 aa22.31■■□□□ 1.16
RTN4-201ENST00000317610 ADALQ6DHV7 355 aa22.31■■□□□ 1.16
RTN4-201ENST00000317610 ATG9AQ7Z3C6 839 aa22.31■■□□□ 1.16
RTN4-201ENST00000317610 NCOA5Q9HCD5 579 aaKnown RBP22.31■■□□□ 1.16
RTN4-201ENST00000317610 PCDHA7Q9UN72 937 aa22.31■■□□□ 1.16
RTN4-201ENST00000317610 PLEKHG2Q9H7P9 1386 aa22.3■■□□□ 1.16
RTN4-201ENST00000317610 LMBR1LQ6UX01 489 aa22.3■■□□□ 1.16
RTN4-201ENST00000317610 AOPEPQ8N6M6 819 aa22.3■■□□□ 1.16
RTN4-201ENST00000317610 PLBD2Q8NHP8 589 aa22.3■■□□□ 1.16
RTN4-201ENST00000317610 BPIFA3Q9BQP9 254 aa22.3■■□□□ 1.16
RTN4-201ENST00000317610 IMPACTQ9P2X3 320 aa22.3■■□□□ 1.16
RTN4-201ENST00000317610 FDPSP14324 419 aaKnown RBP22.3■■□□□ 1.16
RTN4-201ENST00000317610 MORC2Q9Y6X9 1032 aaPredicted RBP22.3■■□□□ 1.16
RTN4-201ENST00000317610 FILIP1Q7Z7B0 1213 aa22.29■■□□□ 1.16
RTN4-201ENST00000317610 NBPF11Q86T75 865 aa22.29■■□□□ 1.16
RTN4-201ENST00000317610 ZNF592Q92610 1267 aa22.29■■□□□ 1.16
RTN4-201ENST00000317610 MEGF6O75095 1541 aa22.29■■□□□ 1.16
RTN4-201ENST00000317610 ZNF142P52746 1687 aaPredicted RBP22.29■■□□□ 1.16
RTN4-201ENST00000317610 MAST3O60307 1309 aa22.29■■□□□ 1.16
RTN4-201ENST00000317610 A0A087WWV3 80 aa22.29■■□□□ 1.16
RTN4-201ENST00000317610 ATP5J2-PTCD1G3V325 749 aa22.29■■□□□ 1.16
RTN4-201ENST00000317610 H7C1W4 665 aa22.29■■□□□ 1.16
RTN4-201ENST00000317610 KIF2AO00139 706 aaPredicted RBP22.29■■□□□ 1.16
RTN4-201ENST00000317610 PTCD1O75127 700 aaKnown RBP22.29■■□□□ 1.16
RTN4-201ENST00000317610 SLFNL1Q499Z3 407 aa22.29■■□□□ 1.16
RTN4-201ENST00000317610 A0A0G2JLW4 131 aa22.28■■□□□ 1.16
RTN4-201ENST00000317610 TATP17735 454 aaPredicted RBP22.28■■□□□ 1.16
RTN4-201ENST00000317610 IFNL2Q8IZJ0 200 aa22.28■■□□□ 1.16
RTN4-201ENST00000317610 FMNL2Q96PY5 1086 aa22.28■■□□□ 1.16
RTN4-201ENST00000317610 PIP4K2AP48426 406 aaPredicted RBP22.28■■□□□ 1.16
RTN4-201ENST00000317610 TTC5Q8N0Z6 440 aa22.28■■□□□ 1.16
RTN4-201ENST00000317610 LINC00301Q8NCQ3 95 aa22.28■■□□□ 1.16
RTN4-201ENST00000317610 KIF18AQ8NI77 898 aa22.28■■□□□ 1.16
RTN4-201ENST00000317610 ALS2Q96Q42 1657 aa22.27■■□□□ 1.16
RTN4-201ENST00000317610 NEDD4P46934 1319 aa22.27■■□□□ 1.16
RTN4-201ENST00000317610 TJP1Q07157 1748 aa22.27■■□□□ 1.16
RTN4-201ENST00000317610 RNF113AO15541 343 aaKnown RBP22.27■■□□□ 1.16
RTN4-201ENST00000317610 GUCY1B3Q02153 619 aa22.27■■□□□ 1.16
RTN4-201ENST00000317610 LMOD2Q6P5Q4 547 aa22.27■■□□□ 1.16
RTN4-201ENST00000317610 ZNF397Q8NF99 534 aaPredicted RBP22.27■■□□□ 1.16
RTN4-201ENST00000317610 ERO1AQ96HE7 468 aa22.27■■□□□ 1.16
RTN4-201ENST00000317610 ZNF215Q9UL58 517 aaPredicted RBP22.27■■□□□ 1.16
RTN4-201ENST00000317610 DDX60Q8IY21 1712 aaKnown RBP22.27■■□□□ 1.16
RTN4-201ENST00000317610 IL15P40933 162 aaPredicted RBP22.26■■□□□ 1.15
RTN4-201ENST00000317610 GABPB1Q06547 395 aaPredicted RBP22.26■■□□□ 1.15
RTN4-201ENST00000317610 KIAA1468Q9P260 1216 aa22.26■■□□□ 1.15
RTN4-201ENST00000317610 YEATS4O95619 227 aa22.26■■□□□ 1.15
RTN4-201ENST00000317610 NEUROD6Q96NK8 337 aa22.26■■□□□ 1.15
RTN4-201ENST00000317610 NUP188Q5SRE5 1749 aa22.26■■□□□ 1.15
RTN4-201ENST00000317610 PKD1L3Q7Z443 1732 aa22.26■■□□□ 1.15
RTN4-201ENST00000317610 NWD2Q9ULI1 1742 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms