RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 PLAURQ03405 335 aa6.13□□□□□ -1.43
SMCO3-201ENST00000316048 GIMAP6Q6P9H5 292 aa6.13□□□□□ -1.43
SMCO3-201ENST00000316048 PMFBP1Q8TBY8 1022 aa6.13□□□□□ -1.43
SMCO3-201ENST00000316048 GPRASP2Q96D09 838 aa6.13□□□□□ -1.43
SMCO3-201ENST00000316048 NOC4LQ9BVI4 516 aaKnown RBP6.13□□□□□ -1.43
SMCO3-201ENST00000316048 ATF4P18848 351 aaPredicted RBP6.13□□□□□ -1.43
SMCO3-201ENST00000316048 ITGA6P23229 1130 aa6.13□□□□□ -1.43
SMCO3-201ENST00000316048 GBP2P32456 591 aaPredicted RBP6.13□□□□□ -1.43
SMCO3-201ENST00000316048 FAM160A1Q05DH4 1040 aa6.13□□□□□ -1.43
SMCO3-201ENST00000316048 SPON2Q9BUD6 331 aa6.13□□□□□ -1.43
SMCO3-201ENST00000316048 RASSF4Q9H2L5 321 aa6.13□□□□□ -1.43
SMCO3-201ENST00000316048 PAGE1O75459 146 aa6.12□□□□□ -1.43
SMCO3-201ENST00000316048 TBC1D8BQ0IIM8 1120 aa6.12□□□□□ -1.43
SMCO3-201ENST00000316048 FAAP100Q0VG06 881 aa6.12□□□□□ -1.43
SMCO3-201ENST00000316048 HYAL2Q12891 473 aa6.12□□□□□ -1.43
SMCO3-201ENST00000316048 LAMC2Q13753 1193 aa6.12□□□□□ -1.43
SMCO3-201ENST00000316048 ASAP3Q8TDY4 903 aa6.12□□□□□ -1.43
SMCO3-201ENST00000316048 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.12□□□□□ -1.43
SMCO3-201ENST00000316048 DCAF1Q9Y4B6 1507 aa6.11□□□□□ -1.43
SMCO3-201ENST00000316048 H7C1W4 665 aa6.11□□□□□ -1.43
SMCO3-201ENST00000316048 ENC1O14682 589 aa6.11□□□□□ -1.43
SMCO3-201ENST00000316048 RGS20O76081 388 aa6.11□□□□□ -1.43
SMCO3-201ENST00000316048 MAP3K6O95382 1288 aa6.11□□□□□ -1.43
SMCO3-201ENST00000316048 FGFR3P22607 806 aa6.11□□□□□ -1.43
SMCO3-201ENST00000316048 KIAA0825Q8IV33 1275 aa6.11□□□□□ -1.43
SMCO3-201ENST00000316048 TMEM74Q96NL1 305 aa6.11□□□□□ -1.43
SMCO3-201ENST00000316048 RSRP1Q9BUV0 290 aa6.11□□□□□ -1.43
SMCO3-201ENST00000316048 GMPR2Q9P2T1 348 aaKnown RBP6.11□□□□□ -1.43
SMCO3-201ENST00000316048 ATXN7L1Q9ULK2 861 aaPredicted RBP6.11□□□□□ -1.43
SMCO3-201ENST00000316048 SNRPBP14678 240 aaKnown RBP6.11□□□□□ -1.43
SMCO3-201ENST00000316048 ZNF157P51786 506 aaPredicted RBP6.11□□□□□ -1.43
SMCO3-201ENST00000316048 FBXL19Q6PCT2 694 aa6.11□□□□□ -1.43
SMCO3-201ENST00000316048 EAF1Q96JC9 268 aaPredicted RBP6.11□□□□□ -1.43
SMCO3-201ENST00000316048 RHOVQ96L33 236 aa6.11□□□□□ -1.43
SMCO3-201ENST00000316048 PPP4R2Q9NY27 417 aa6.11□□□□□ -1.43
SMCO3-201ENST00000316048 C2CD2LO14523 706 aa6.1□□□□□ -1.43
SMCO3-201ENST00000316048 HOXD8P13378 290 aaPredicted RBP6.1□□□□□ -1.43
SMCO3-201ENST00000316048 EIF4A3P38919 411 aaKnown RBP6.1□□□□□ -1.43
SMCO3-201ENST00000316048 PHC3Q8NDX5 983 aa6.1□□□□□ -1.43
SMCO3-201ENST00000316048 NXPE3Q969Y0 559 aa6.1□□□□□ -1.43
SMCO3-201ENST00000316048 MUC3BQ9H195 1237 aa6.1□□□□□ -1.43
SMCO3-201ENST00000316048 PPM1HQ9ULR3 514 aa6.1□□□□□ -1.43
SMCO3-201ENST00000316048 A0A096LPE4 126 aa6.1□□□□□ -1.43
SMCO3-201ENST00000316048 A0A1W2PPZ6 126 aa6.1□□□□□ -1.43
SMCO3-201ENST00000316048 CDC14CA4D256 554 aa6.1□□□□□ -1.43
SMCO3-201ENST00000316048 ITPKAP23677 461 aa6.1□□□□□ -1.43
SMCO3-201ENST00000316048 LIG3P49916 1009 aa6.1□□□□□ -1.43
SMCO3-201ENST00000316048 NRLP54845 237 aa6.1□□□□□ -1.43
SMCO3-201ENST00000316048 CCDC144BQ3MJ40 725 aa6.1□□□□□ -1.43
SMCO3-201ENST00000316048 RASIP1Q5U651 963 aa6.1□□□□□ -1.43
SMCO3-201ENST00000316048 BHLHE41Q9C0J9 482 aaPredicted RBP6.1□□□□□ -1.43
SMCO3-201ENST00000316048 ZNF576Q9H609 170 aa6.1□□□□□ -1.43
SMCO3-201ENST00000316048 PIF1Q9H611 641 aa6.1□□□□□ -1.43
SMCO3-201ENST00000316048 SEC31BQ9NQW1 1179 aa6.1□□□□□ -1.43
SMCO3-201ENST00000316048 UBP1Q9NZI7 540 aa6.1□□□□□ -1.43
SMCO3-201ENST00000316048 LOC102724428A0A0B4J2F2 783 aa6.09□□□□□ -1.43
SMCO3-201ENST00000316048 GARTP22102 1010 aa6.09□□□□□ -1.43
SMCO3-201ENST00000316048 CRKP46108 304 aa6.09□□□□□ -1.43
SMCO3-201ENST00000316048 SIK1P57059 783 aa6.09□□□□□ -1.43
SMCO3-201ENST00000316048 GPLD1P80108 840 aa6.09□□□□□ -1.43
SMCO3-201ENST00000316048 SYT9Q86SS6 491 aa6.09□□□□□ -1.43
SMCO3-201ENST00000316048 RELL1Q8IUW5 271 aa6.09□□□□□ -1.43
SMCO3-201ENST00000316048 ZNF296Q8WUU4 475 aaPredicted RBP6.09□□□□□ -1.43
SMCO3-201ENST00000316048 TRIM47Q96LD4 638 aa6.09□□□□□ -1.43
SMCO3-201ENST00000316048 DNAJB12Q9NXW2 375 aaKnown RBP6.09□□□□□ -1.43
SMCO3-201ENST00000316048 NAGPAQ9UK23 515 aa6.09□□□□□ -1.43
SMCO3-201ENST00000316048 PDE2AO00408 941 aaPredicted RBP6.08□□□□□ -1.44
SMCO3-201ENST00000316048 PF4P02776 101 aa6.08□□□□□ -1.44
SMCO3-201ENST00000316048 TFE3P19532 575 aaPredicted RBP6.08□□□□□ -1.44
SMCO3-201ENST00000316048 NASPP49321 788 aaPredicted RBP6.08□□□□□ -1.44
SMCO3-201ENST00000316048 PCBP4P57723 403 aaKnown RBP6.08□□□□□ -1.44
SMCO3-201ENST00000316048 TMEM102Q8N9M5 508 aaPredicted RBP6.08□□□□□ -1.44
SMCO3-201ENST00000316048 TRPM4Q8TD43 1214 aa6.08□□□□□ -1.44
SMCO3-201ENST00000316048 RASGRP4Q8TDF6 673 aa6.08□□□□□ -1.44
SMCO3-201ENST00000316048 NECAB3Q96P71 396 aaPredicted RBP6.08□□□□□ -1.44
SMCO3-201ENST00000316048 POP1Q99575 1024 aaKnown RBP6.08□□□□□ -1.44
SMCO3-201ENST00000316048 GINM1Q9NU53 330 aa6.08□□□□□ -1.44
SMCO3-201ENST00000316048 EFR3BQ9Y2G0 817 aa6.08□□□□□ -1.44
SMCO3-201ENST00000316048 XRCC5P13010 732 aaKnown RBP6.08□□□□□ -1.44
SMCO3-201ENST00000316048 EIF2AK2P19525 551 aaKnown RBP6.08□□□□□ -1.44
SMCO3-201ENST00000316048 SV2BQ7L1I2 683 aa6.08□□□□□ -1.44
SMCO3-201ENST00000316048 SPACA7Q96KW9 195 aa6.08□□□□□ -1.44
SMCO3-201ENST00000316048 SPATA32Q96LK8 384 aa6.08□□□□□ -1.44
SMCO3-201ENST00000316048 PBX4Q9BYU1 374 aa6.08□□□□□ -1.44
SMCO3-201ENST00000316048 UBE2OQ9C0C9 1292 aaKnown RBP6.08□□□□□ -1.44
SMCO3-201ENST00000316048 GPN3Q9UHW5 284 aaPredicted RBP6.08□□□□□ -1.44
SMCO3-201ENST00000316048 MRVI1Q9Y6F6 885 aa6.08□□□□□ -1.44
SMCO3-201ENST00000316048 CPB1P15086 417 aa6.07□□□□□ -1.44
SMCO3-201ENST00000316048 TTBK2Q6IQ55 1244 aa6.07□□□□□ -1.44
SMCO3-201ENST00000316048 VPS37DQ86XT2 251 aa6.07□□□□□ -1.44
SMCO3-201ENST00000316048 VWA5B2Q8N398 1253 aa6.07□□□□□ -1.44
SMCO3-201ENST00000316048 ANKRD24Q8TF21 1146 aa6.07□□□□□ -1.44
SMCO3-201ENST00000316048 ZNF408Q9H9D4 720 aa6.07□□□□□ -1.44
SMCO3-201ENST00000316048 PRR12Q9ULL5 1215 aa6.07□□□□□ -1.44
SMCO3-201ENST00000316048 STK10O94804 968 aaKnown RBP6.07□□□□□ -1.44
SMCO3-201ENST00000316048 RBL2Q08999 1139 aa6.07□□□□□ -1.44
SMCO3-201ENST00000316048 CAMK2GQ13555 558 aaPredicted RBP6.07□□□□□ -1.44
SMCO3-201ENST00000316048 FAM182BQ5T319 152 aa6.07□□□□□ -1.44
SMCO3-201ENST00000316048 PCNX4Q63HM2 1172 aa6.07□□□□□ -1.44
SMCO3-201ENST00000316048 CEP135Q66GS9 1140 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms