RNA–Protein interactions for RNA: ENST00000309828.4

EIF3F-201, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3F, Length 1,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-201ENST00000309828 NMIQ13287 307 aaPredicted RBP17.04■□□□□ 0.32
EIF3F-201ENST00000309828 BECN1Q14457 450 aa17.04■□□□□ 0.32
EIF3F-201ENST00000309828 EDC3Q96F86 508 aaKnown RBP17.04■□□□□ 0.32
EIF3F-201ENST00000309828 ZFYP08048 801 aaPredicted RBP17.03■□□□□ 0.32
EIF3F-201ENST00000309828 MCAMP43121 646 aa17.03■□□□□ 0.32
EIF3F-201ENST00000309828 PHKA1P46020 1223 aa17.03■□□□□ 0.32
EIF3F-201ENST00000309828 ANAPC15P60006 121 aa17.03■□□□□ 0.32
EIF3F-201ENST00000309828 FKBP4Q02790 459 aaKnown RBP eCLIP17.03■□□□□ 0.32
EIF3F-201ENST00000309828 DEFB132Q7Z7B7 95 aa17.03■□□□□ 0.32
EIF3F-201ENST00000309828 IL17RAQ96F46 866 aa17.03■□□□□ 0.32
EIF3F-201ENST00000309828 LSG1Q9H089 658 aaKnown RBP17.03■□□□□ 0.32
EIF3F-201ENST00000309828 HELLSQ9NRZ9 838 aa17.03■□□□□ 0.32
EIF3F-201ENST00000309828 GNL3LQ9NVN8 582 aaKnown RBP17.03■□□□□ 0.32
EIF3F-201ENST00000309828 MED23Q9ULK4 1368 aa17.02■□□□□ 0.32
EIF3F-201ENST00000309828 ZNF804BA4D1E1 1349 aa17.02■□□□□ 0.32
EIF3F-201ENST00000309828 TAF1P21675 1872 aa17.02■□□□□ 0.32
EIF3F-201ENST00000309828 ZAP70P43403 619 aa17.02■□□□□ 0.32
EIF3F-201ENST00000309828 KCNJ4P48050 445 aa17.02■□□□□ 0.32
EIF3F-201ENST00000309828 SCARF1Q14162 830 aa17.02■□□□□ 0.32
EIF3F-201ENST00000309828 RABEP1Q15276 862 aa17.02■□□□□ 0.32
EIF3F-201ENST00000309828 CAVIN4Q5BKX8 364 aa17.02■□□□□ 0.32
EIF3F-201ENST00000309828 ZSCAN25Q6NSZ9 544 aa17.02■□□□□ 0.32
EIF3F-201ENST00000309828 SLC16A10Q8TF71 515 aa17.02■□□□□ 0.32
EIF3F-201ENST00000309828 KIF2CQ99661 725 aa17.02■□□□□ 0.32
EIF3F-201ENST00000309828 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.02■□□□□ 0.32
EIF3F-201ENST00000309828 DAXXQ9UER7 740 aaPredicted RBP17.02■□□□□ 0.32
EIF3F-201ENST00000309828 LEMD3Q9Y2U8 911 aa17.02■□□□□ 0.32
EIF3F-201ENST00000309828 ANKRD31Q8N7Z5 1873 aa17.01■□□□□ 0.31
EIF3F-201ENST00000309828 A0A0D9SFI3 127 aa17.01■□□□□ 0.31
EIF3F-201ENST00000309828 RNF113AO15541 343 aaKnown RBP17.01■□□□□ 0.31
EIF3F-201ENST00000309828 NPR1P16066 1061 aa17.01■□□□□ 0.31
EIF3F-201ENST00000309828 FAM227BQ96M60 508 aa17.01■□□□□ 0.31
EIF3F-201ENST00000309828 IL25Q9H293 177 aa17.01■□□□□ 0.31
EIF3F-201ENST00000309828 NDUFB9Q9Y6M9 179 aa17.01■□□□□ 0.31
EIF3F-201ENST00000309828 AKAP11Q9UKA4 1901 aa17■□□□□ 0.31
EIF3F-201ENST00000309828 SEMA3EO15041 775 aa17■□□□□ 0.31
EIF3F-201ENST00000309828 HSPA4P34932 840 aa17■□□□□ 0.31
EIF3F-201ENST00000309828 MCMDC2Q4G0Z9 681 aa17■□□□□ 0.31
EIF3F-201ENST00000309828 ZMYM1Q5SVZ6 1142 aa17■□□□□ 0.31
EIF3F-201ENST00000309828 SPATA5Q8NB90 893 aa17■□□□□ 0.31
EIF3F-201ENST00000309828 SNX21Q969T3 373 aa17■□□□□ 0.31
EIF3F-201ENST00000309828 HMG20BQ9P0W2 317 aa17■□□□□ 0.31
EIF3F-201ENST00000309828 XDHP47989 1333 aa16.99■□□□□ 0.31
EIF3F-201ENST00000309828 PDS5AQ29RF7 1337 aaKnown RBP16.99■□□□□ 0.31
EIF3F-201ENST00000309828 CCDC171Q6TFL3 1326 aa16.99■□□□□ 0.31
EIF3F-201ENST00000309828 SNAP23O00161 211 aa16.99■□□□□ 0.31
EIF3F-201ENST00000309828 ALDH1B1P30837 517 aa16.99■□□□□ 0.31
EIF3F-201ENST00000309828 MSL1Q68DK7 614 aa16.99■□□□□ 0.31
EIF3F-201ENST00000309828 C15orf52Q6ZUT6 534 aaKnown RBP16.99■□□□□ 0.31
EIF3F-201ENST00000309828 FBXO33Q7Z6M2 555 aa16.99■□□□□ 0.31
EIF3F-201ENST00000309828 ANTXR1Q9H6X2 564 aa16.99■□□□□ 0.31
EIF3F-201ENST00000309828 LRRC37AA6NMS7 1700 aa16.99■□□□□ 0.31
EIF3F-201ENST00000309828 CYP2E1P05181 493 aaPredicted RBP16.98■□□□□ 0.31
EIF3F-201ENST00000309828 SRGNP10124 158 aa16.98■□□□□ 0.31
EIF3F-201ENST00000309828 BCAMP50895 628 aa16.98■□□□□ 0.31
EIF3F-201ENST00000309828 RASGRF1Q13972 1273 aa16.98■□□□□ 0.31
EIF3F-201ENST00000309828 MASTLQ96GX5 879 aa16.98■□□□□ 0.31
EIF3F-201ENST00000309828 IGSF3O75054 1194 aa16.97■□□□□ 0.31
EIF3F-201ENST00000309828 ATP2B4P23634 1241 aa16.97■□□□□ 0.31
EIF3F-201ENST00000309828 VPS37DQ86XT2 251 aa16.97■□□□□ 0.31
EIF3F-201ENST00000309828 SP8Q8IXZ3 490 aa16.97■□□□□ 0.31
EIF3F-201ENST00000309828 MAP4K1Q92918 833 aa16.97■□□□□ 0.31
EIF3F-201ENST00000309828 FAM84BQ96KN1 310 aaPredicted RBP16.97■□□□□ 0.31
EIF3F-201ENST00000309828 PODXL2Q9NZ53 605 aa16.97■□□□□ 0.31
EIF3F-201ENST00000309828 ANKIB1Q9P2G1 1089 aa16.97■□□□□ 0.31
EIF3F-201ENST00000309828 DENND2AQ9ULE3 1009 aa16.97■□□□□ 0.31
EIF3F-201ENST00000309828 PPEF1O14829 653 aaPredicted RBP16.96■□□□□ 0.31
EIF3F-201ENST00000309828 HIBADHP31937 336 aaKnown RBP16.96■□□□□ 0.31
EIF3F-201ENST00000309828 GYG1P46976 350 aa16.96■□□□□ 0.31
EIF3F-201ENST00000309828 UBE3CQ15386 1083 aa16.96■□□□□ 0.31
EIF3F-201ENST00000309828 STYK1Q6J9G0 422 aa16.96■□□□□ 0.31
EIF3F-201ENST00000309828 PI16Q6UXB8 463 aa16.96■□□□□ 0.31
EIF3F-201ENST00000309828 HSCBQ8IWL3 235 aa16.96■□□□□ 0.31
EIF3F-201ENST00000309828 APPBP2Q92624 585 aa16.96■□□□□ 0.31
EIF3F-201ENST00000309828 KCNB2Q92953 911 aa16.96■□□□□ 0.31
EIF3F-201ENST00000309828 SRCAPQ6ZRS2 3230 aa16.96■□□□□ 0.31
EIF3F-201ENST00000309828 IRS2Q9Y4H2 1338 aa16.96■□□□□ 0.3
EIF3F-201ENST00000309828 PTH1RQ03431 593 aa16.95■□□□□ 0.3
EIF3F-201ENST00000309828 MAP3K12Q12852 859 aa16.95■□□□□ 0.3
EIF3F-201ENST00000309828 TBC1D2Q9BYX2 928 aa16.95■□□□□ 0.3
EIF3F-201ENST00000309828 PIH1D3Q9NQM4 214 aaKnown RBP16.95■□□□□ 0.3
EIF3F-201ENST00000309828 ATP6V0A2Q9Y487 856 aa16.95■□□□□ 0.3
EIF3F-201ENST00000309828 DOCK2Q92608 1830 aa16.95■□□□□ 0.3
EIF3F-201ENST00000309828 MYH7P12883 1935 aa16.94■□□□□ 0.3
EIF3F-201ENST00000309828 H0YIN7 160 aa16.94■□□□□ 0.3
EIF3F-201ENST00000309828 ADD2P35612 726 aa16.94■□□□□ 0.3
EIF3F-201ENST00000309828 GPSM2P81274 684 aa16.94■□□□□ 0.3
EIF3F-201ENST00000309828 NECTIN1Q15223 517 aa16.94■□□□□ 0.3
EIF3F-201ENST00000309828 RNF20Q5VTR2 975 aa16.94■□□□□ 0.3
EIF3F-201ENST00000309828 TMED8Q6PL24 325 aaPredicted RBP16.94■□□□□ 0.3
EIF3F-201ENST00000309828 ZNF589Q86UQ0 364 aaPredicted RBP16.94■□□□□ 0.3
EIF3F-201ENST00000309828 DSCC1Q9BVC3 393 aa16.94■□□□□ 0.3
EIF3F-201ENST00000309828 GGA1Q9UJY5 639 aa16.94■□□□□ 0.3
EIF3F-201ENST00000309828 RBM8AQ9Y5S9 174 aaKnown RBP16.94■□□□□ 0.3
EIF3F-201ENST00000309828 U3KPZ7 1027 aaPredicted RBP16.94■□□□□ 0.3
EIF3F-201ENST00000309828 MAST3O60307 1309 aa16.94■□□□□ 0.3
EIF3F-201ENST00000309828 COL11A2P13942 1736 aaPredicted RBP16.93■□□□□ 0.3
EIF3F-201ENST00000309828 ST18O60284 1047 aa16.93■□□□□ 0.3
EIF3F-201ENST00000309828 WASHC4Q2M389 1173 aa16.93■□□□□ 0.3
EIF3F-201ENST00000309828 C2CD5Q86YS7 1000 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms