RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 RAD50Q92878 1312 aa10.72□□□□□ -0.69
XCR1-201ENST00000309285 RNF187Q5TA31 235 aaPredicted RBP10.71□□□□□ -0.69
XCR1-201ENST00000309285 EDC3Q96F86 508 aaKnown RBP10.71□□□□□ -0.69
XCR1-201ENST00000309285 AKAP2Q9Y2D5 859 aa10.71□□□□□ -0.69
XCR1-201ENST00000309285 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.71□□□□□ -0.69
XCR1-201ENST00000309285 SFPQP23246 707 aaKnown RBP eCLIP10.71□□□□□ -0.69
XCR1-201ENST00000309285 DBNDD2Q9BQY9 259 aa10.71□□□□□ -0.69
XCR1-201ENST00000309285 CRACR2AQ9BSW2 395 aa10.71□□□□□ -0.69
XCR1-201ENST00000309285 SRRTQ9BXP5 876 aaKnown RBP10.71□□□□□ -0.69
XCR1-201ENST00000309285 SEPT11Q9NVA2 429 aaKnown RBP10.71□□□□□ -0.69
XCR1-201ENST00000309285 CYP27B1O15528 508 aa10.71□□□□□ -0.69
XCR1-201ENST00000309285 MICALL1Q8N3F8 863 aa10.71□□□□□ -0.69
XCR1-201ENST00000309285 SNX14Q9Y5W7 946 aa10.71□□□□□ -0.69
XCR1-201ENST00000309285 HMGB1P09429 215 aaKnown RBP10.71□□□□□ -0.7
XCR1-201ENST00000309285 DMTNQ08495 405 aa10.71□□□□□ -0.7
XCR1-201ENST00000309285 JAKMIP3Q5VZ66 844 aa10.71□□□□□ -0.7
XCR1-201ENST00000309285 KIF2CQ99661 725 aa10.71□□□□□ -0.7
XCR1-201ENST00000309285 FAM107BQ9H098 131 aa10.71□□□□□ -0.7
XCR1-201ENST00000309285 ZNF219Q9P2Y4 722 aaPredicted RBP10.71□□□□□ -0.7
XCR1-201ENST00000309285 CCDC171Q6TFL3 1326 aa10.71□□□□□ -0.7
XCR1-201ENST00000309285 HSPA4P34932 840 aa10.71□□□□□ -0.7
XCR1-201ENST00000309285 GTF3C6Q969F1 213 aa10.71□□□□□ -0.7
XCR1-201ENST00000309285 NF2P35240 595 aa10.7□□□□□ -0.7
XCR1-201ENST00000309285 IL15P40933 162 aaPredicted RBP10.7□□□□□ -0.7
XCR1-201ENST00000309285 CREB3L3Q68CJ9 461 aa10.7□□□□□ -0.7
XCR1-201ENST00000309285 TTLL7Q6ZT98 887 aa10.7□□□□□ -0.7
XCR1-201ENST00000309285 CKAP2LQ8IYA6 745 aa10.7□□□□□ -0.7
XCR1-201ENST00000309285 CCDC69A6NI79 296 aa10.7□□□□□ -0.7
XCR1-201ENST00000309285 POLA2Q14181 598 aa10.7□□□□□ -0.7
XCR1-201ENST00000309285 FAM89AQ96GI7 184 aa10.7□□□□□ -0.7
XCR1-201ENST00000309285 INTS4Q96HW7 963 aaKnown RBP10.7□□□□□ -0.7
XCR1-201ENST00000309285 LRRC2Q9BYS8 371 aa10.7□□□□□ -0.7
XCR1-201ENST00000309285 U3KPZ7 1027 aaPredicted RBP10.7□□□□□ -0.7
XCR1-201ENST00000309285 USP5P45974 858 aa10.7□□□□□ -0.7
XCR1-201ENST00000309285 TERF1P54274 439 aa10.7□□□□□ -0.7
XCR1-201ENST00000309285 PPFIA3O75145 1194 aa10.7□□□□□ -0.7
XCR1-201ENST00000309285 CHMP4BP1P59074 171 aa10.7□□□□□ -0.7
XCR1-201ENST00000309285 TNNI3KQ59H18 835 aa10.7□□□□□ -0.7
XCR1-201ENST00000309285 SOGA3Q5TF21 947 aa10.7□□□□□ -0.7
XCR1-201ENST00000309285 WWC2Q6AWC2 1192 aa10.7□□□□□ -0.7
XCR1-201ENST00000309285 CEP57L1Q8IYX8 460 aa10.7□□□□□ -0.7
XCR1-201ENST00000309285 SPATA32Q96LK8 384 aa10.7□□□□□ -0.7
XCR1-201ENST00000309285 FPGT-TNNI3KV9GXZ4 949 aa10.7□□□□□ -0.7
XCR1-201ENST00000309285 NRKQ7Z2Y5 1582 aa10.7□□□□□ -0.7
XCR1-201ENST00000309285 ARHGAP23Q9P227 1491 aa10.69□□□□□ -0.7
XCR1-201ENST00000309285 ZNF594Q96JF6 807 aaPredicted RBP10.69□□□□□ -0.7
XCR1-201ENST00000309285 NEK1Q96PY6 1258 aa10.69□□□□□ -0.7
XCR1-201ENST00000309285 GOLGA6L10A6NI86 522 aa10.69□□□□□ -0.7
XCR1-201ENST00000309285 CLGNO14967 610 aa10.69□□□□□ -0.7
XCR1-201ENST00000309285 EZRP15311 586 aaKnown RBP10.69□□□□□ -0.7
XCR1-201ENST00000309285 CHAMP1Q96JM3 812 aa10.69□□□□□ -0.7
XCR1-201ENST00000309285 BANK1Q8NDB2 785 aa10.69□□□□□ -0.7
XCR1-201ENST00000309285 MYRIPQ8NFW9 859 aa10.69□□□□□ -0.7
XCR1-201ENST00000309285 SMARCC1Q92922 1105 aaPredicted RBP10.69□□□□□ -0.7
XCR1-201ENST00000309285 UBAC1Q9BSL1 405 aa10.69□□□□□ -0.7
XCR1-201ENST00000309285 MAGEC2Q9UBF1 373 aaPredicted RBP10.69□□□□□ -0.7
XCR1-201ENST00000309285 SLIT1O75093 1534 aa10.69□□□□□ -0.7
XCR1-201ENST00000309285 CAPN2P17655 700 aa10.69□□□□□ -0.7
XCR1-201ENST00000309285 FILIP1LQ4L180 1135 aa10.69□□□□□ -0.7
XCR1-201ENST00000309285 KRBA2Q6ZNG9 492 aa10.69□□□□□ -0.7
XCR1-201ENST00000309285 CCDC91Q7Z6B0 441 aa10.69□□□□□ -0.7
XCR1-201ENST00000309285 ZSWIM4Q9H7M6 989 aa10.69□□□□□ -0.7
XCR1-201ENST00000309285 CTNNA3Q9UI47 895 aa10.69□□□□□ -0.7
XCR1-201ENST00000309285 UBR1Q8IWV7 1749 aa10.69□□□□□ -0.7
XCR1-201ENST00000309285 ANKRD18BA2A2Z9 1011 aa10.68□□□□□ -0.7
XCR1-201ENST00000309285 MCMDC2Q4G0Z9 681 aa10.68□□□□□ -0.7
XCR1-201ENST00000309285 ANKRD18AQ8IVF6 992 aa10.68□□□□□ -0.7
XCR1-201ENST00000309285 DNAJC10Q8IXB1 793 aa10.68□□□□□ -0.7
XCR1-201ENST00000309285 ZNF397Q8NF99 534 aaPredicted RBP10.68□□□□□ -0.7
XCR1-201ENST00000309285 TANGO6Q9C0B7 1094 aa10.68□□□□□ -0.7
XCR1-201ENST00000309285 SSH2Q76I76 1423 aa10.68□□□□□ -0.7
XCR1-201ENST00000309285 IVLP07476 585 aa10.68□□□□□ -0.7
XCR1-201ENST00000309285 ZSCAN22P10073 491 aaPredicted RBP10.68□□□□□ -0.7
XCR1-201ENST00000309285 HAND2P61296 217 aa10.68□□□□□ -0.7
XCR1-201ENST00000309285 PTH1RQ03431 593 aa10.68□□□□□ -0.7
XCR1-201ENST00000309285 SYCP1Q15431 976 aa10.68□□□□□ -0.7
XCR1-201ENST00000309285 CCDC186Q7Z3E2 898 aa10.68□□□□□ -0.7
XCR1-201ENST00000309285 C17orf53Q8N3J3 647 aaPredicted RBP10.68□□□□□ -0.7
XCR1-201ENST00000309285 HMG20BQ9P0W2 317 aa10.68□□□□□ -0.7
XCR1-201ENST00000309285 IGKV5-2P06315 115 aa10.68□□□□□ -0.7
XCR1-201ENST00000309285 IGHMBP2P38935 993 aaKnown RBP10.68□□□□□ -0.7
XCR1-201ENST00000309285 GABPB1Q06547 395 aaPredicted RBP10.68□□□□□ -0.7
XCR1-201ENST00000309285 BRINP3Q76B58 766 aa10.68□□□□□ -0.7
XCR1-201ENST00000309285 RASEFQ8IZ41 740 aa10.68□□□□□ -0.7
XCR1-201ENST00000309285 BRF1Q92994 677 aa10.68□□□□□ -0.7
XCR1-201ENST00000309285 ACSBG1Q96GR2 724 aa10.68□□□□□ -0.7
XCR1-201ENST00000309285 ZNF396Q96N95 335 aaPredicted RBP10.68□□□□□ -0.7
XCR1-201ENST00000309285 GBP3Q9H0R5 595 aa10.68□□□□□ -0.7
XCR1-201ENST00000309285 TLR7Q9NYK1 1049 aaKnown RBP10.68□□□□□ -0.7
XCR1-201ENST00000309285 TFIP11Q9UBB9 837 aaKnown RBP10.68□□□□□ -0.7
XCR1-201ENST00000309285 C1orf167Q5SNV9 1468 aa10.68□□□□□ -0.7
XCR1-201ENST00000309285 SNW1Q13573 536 aaKnown RBP10.68□□□□□ -0.7
XCR1-201ENST00000309285 DHX8Q14562 1220 aaKnown RBP10.68□□□□□ -0.7
XCR1-201ENST00000309285 CCDC82Q8N4S0 544 aa10.68□□□□□ -0.7
XCR1-201ENST00000309285 PI4K2BQ8TCG2 481 aa10.68□□□□□ -0.7
XCR1-201ENST00000309285 PAG1Q9NWQ8 432 aa10.68□□□□□ -0.7
XCR1-201ENST00000309285 SPATA31A3Q5VYP0 1347 aa10.68□□□□□ -0.7
XCR1-201ENST00000309285 CCT2P78371 535 aaKnown RBP10.67□□□□□ -0.7
XCR1-201ENST00000309285 UVSSAQ2YD98 709 aa10.67□□□□□ -0.7
XCR1-201ENST00000309285 CCDC129Q6ZRS4 1044 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms