RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 MADDQ8WXG6 1647 aa9.58□□□□□ -0.88
PCDHB1-201ENST00000306549 NOP2P46087 812 aaKnown RBP9.58□□□□□ -0.88
PCDHB1-201ENST00000306549 ERMNQ8TAM6 284 aa9.58□□□□□ -0.88
PCDHB1-201ENST00000306549 STK24Q9Y6E0 443 aa9.58□□□□□ -0.88
PCDHB1-201ENST00000306549 TNS3Q68CZ2 1445 aa9.57□□□□□ -0.88
PCDHB1-201ENST00000306549 ADRA2BP18089 450 aa9.57□□□□□ -0.88
PCDHB1-201ENST00000306549 PICK1Q9NRD5 415 aa9.57□□□□□ -0.88
PCDHB1-201ENST00000306549 SMTNL1A8MU46 457 aa9.57□□□□□ -0.88
PCDHB1-201ENST00000306549 CALML3P27482 149 aa9.57□□□□□ -0.88
PCDHB1-201ENST00000306549 BMP2KLQ5H9B9 411 aa9.57□□□□□ -0.88
PCDHB1-201ENST00000306549 KRT27Q7Z3Y8 459 aa9.57□□□□□ -0.88
PCDHB1-201ENST00000306549 H7C1D1 291 aa9.57□□□□□ -0.88
PCDHB1-201ENST00000306549 CTNNA2P26232 953 aa9.57□□□□□ -0.88
PCDHB1-201ENST00000306549 SLC27A3Q5K4L6 730 aa9.57□□□□□ -0.88
PCDHB1-201ENST00000306549 FKBP15Q5T1M5 1219 aa9.57□□□□□ -0.88
PCDHB1-201ENST00000306549 STK11IPQ8N1F8 1099 aa9.57□□□□□ -0.88
PCDHB1-201ENST00000306549 DYDC1Q8WWB3 177 aa9.57□□□□□ -0.88
PCDHB1-201ENST00000306549 BOLA2Q9H3K6 86 aa9.57□□□□□ -0.88
PCDHB1-201ENST00000306549 RANBP6O60518 1105 aaKnown RBP9.57□□□□□ -0.88
PCDHB1-201ENST00000306549 RBM6P78332 1123 aaKnown RBP9.57□□□□□ -0.88
PCDHB1-201ENST00000306549 MTHFSDQ2M296 383 aaKnown RBP9.57□□□□□ -0.88
PCDHB1-201ENST00000306549 CEP63Q96MT8 703 aa9.57□□□□□ -0.88
PCDHB1-201ENST00000306549 THUMPD2Q9BTF0 503 aaKnown RBP9.57□□□□□ -0.88
PCDHB1-201ENST00000306549 MRPS9P82933 396 aaKnown RBP9.57□□□□□ -0.88
PCDHB1-201ENST00000306549 TNMDQ9H2S6 317 aa9.57□□□□□ -0.88
PCDHB1-201ENST00000306549 RTL9Q8NET4 1388 aa9.56□□□□□ -0.88
PCDHB1-201ENST00000306549 GSTTP1A0A1W2PQM5 241 aa9.56□□□□□ -0.88
PCDHB1-201ENST00000306549 NCBP1Q09161 790 aaKnown RBP9.56□□□□□ -0.88
PCDHB1-201ENST00000306549 KANK3Q6NY19 840 aa9.56□□□□□ -0.88
PCDHB1-201ENST00000306549 NAP1L4Q99733 375 aaKnown RBP9.56□□□□□ -0.88
PCDHB1-201ENST00000306549 TAOK3Q9H2K8 898 aa9.56□□□□□ -0.88
PCDHB1-201ENST00000306549 SLC5A4Q9NY91 659 aa9.56□□□□□ -0.88
PCDHB1-201ENST00000306549 MAP2K1Q02750 393 aaPredicted RBP9.56□□□□□ -0.88
PCDHB1-201ENST00000306549 SCAND2PQ9GZW5 306 aaPredicted RBP9.56□□□□□ -0.88
PCDHB1-201ENST00000306549 CEBPZQ03701 1054 aaKnown RBP9.56□□□□□ -0.88
PCDHB1-201ENST00000306549 SSRP1Q08945 709 aaKnown RBP9.56□□□□□ -0.88
PCDHB1-201ENST00000306549 SREK1Q8WXA9 508 aaKnown RBP9.56□□□□□ -0.88
PCDHB1-201ENST00000306549 JAKMIP1Q96N16 626 aaKnown RBP9.56□□□□□ -0.88
PCDHB1-201ENST00000306549 NSFL1CQ9UNZ2 370 aaKnown RBP9.56□□□□□ -0.88
PCDHB1-201ENST00000306549 GCOM1H8Y6P7 765 aaPredicted RBP9.56□□□□□ -0.88
PCDHB1-201ENST00000306549 IFIT3O14879 490 aaKnown RBP9.56□□□□□ -0.88
PCDHB1-201ENST00000306549 MYZAPP0CAP1 466 aa9.56□□□□□ -0.88
PCDHB1-201ENST00000306549 TSPY3P0CV98 308 aa9.56□□□□□ -0.88
PCDHB1-201ENST00000306549 TSPY8P0CW00 308 aa9.56□□□□□ -0.88
PCDHB1-201ENST00000306549 SPA17Q15506 151 aa9.56□□□□□ -0.88
PCDHB1-201ENST00000306549 CCDC85AQ96PX6 553 aaPredicted RBP9.56□□□□□ -0.88
PCDHB1-201ENST00000306549 CCDC194A0A1B0GVG4 234 aa9.56□□□□□ -0.88
PCDHB1-201ENST00000306549 SLU7O95391 586 aaKnown RBP9.56□□□□□ -0.88
PCDHB1-201ENST00000306549 IL13P35225 146 aa9.56□□□□□ -0.88
PCDHB1-201ENST00000306549 ARHGEF10LQ9HCE6 1279 aa9.56□□□□□ -0.88
PCDHB1-201ENST00000306549 PPP2R5BQ15173 497 aa9.56□□□□□ -0.88
PCDHB1-201ENST00000306549 PTPRMP28827 1452 aa9.56□□□□□ -0.88
PCDHB1-201ENST00000306549 K7ELQ4 463 aaPredicted RBP9.56□□□□□ -0.88
PCDHB1-201ENST00000306549 ATP5J2-PTCD1G3V325 749 aa9.55□□□□□ -0.88
PCDHB1-201ENST00000306549 CAVIN2O95810 425 aa9.55□□□□□ -0.88
PCDHB1-201ENST00000306549 IL6STP40189 918 aaPredicted RBP9.55□□□□□ -0.88
PCDHB1-201ENST00000306549 TCP11L1Q9NUJ3 509 aa9.55□□□□□ -0.88
PCDHB1-201ENST00000306549 CASTP20810 708 aaKnown RBP9.55□□□□□ -0.88
PCDHB1-201ENST00000306549 PABPC4Q13310 644 aaKnown RBP eCLIP9.55□□□□□ -0.88
PCDHB1-201ENST00000306549 RAD50Q92878 1312 aa9.55□□□□□ -0.88
PCDHB1-201ENST00000306549 ATP10DQ9P241 1426 aa9.55□□□□□ -0.88
PCDHB1-201ENST00000306549 MCTP2Q6DN12 878 aa9.55□□□□□ -0.88
PCDHB1-201ENST00000306549 RGS22Q8NE09 1264 aa9.55□□□□□ -0.88
PCDHB1-201ENST00000306549 IL1RAPL2Q9NP60 686 aa9.55□□□□□ -0.88
PCDHB1-201ENST00000306549 AOX1Q06278 1338 aa9.55□□□□□ -0.88
PCDHB1-201ENST00000306549 PRIM1P49642 420 aaKnown RBP9.55□□□□□ -0.88
PCDHB1-201ENST00000306549 DCAF15Q66K64 600 aa9.55□□□□□ -0.88
PCDHB1-201ENST00000306549 DPP8Q6V1X1 898 aaPredicted RBP9.55□□□□□ -0.88
PCDHB1-201ENST00000306549 SPATA24Q86W54 205 aa9.55□□□□□ -0.88
PCDHB1-201ENST00000306549 CTAGE5O15320 804 aa9.55□□□□□ -0.88
PCDHB1-201ENST00000306549 NFKBIBQ15653 356 aa9.55□□□□□ -0.88
PCDHB1-201ENST00000306549 TICAM2Q86XR7 235 aa9.55□□□□□ -0.88
PCDHB1-201ENST00000306549 ANKRD44Q8N8A2 993 aa9.55□□□□□ -0.88
PCDHB1-201ENST00000306549 FIBPO43427 364 aa9.55□□□□□ -0.88
PCDHB1-201ENST00000306549 DDX12PQ92771 950 aa9.55□□□□□ -0.88
PCDHB1-201ENST00000306549 MED14O60244 1454 aa9.54□□□□□ -0.88
PCDHB1-201ENST00000306549 MCM3P25205 808 aa9.54□□□□□ -0.88
PCDHB1-201ENST00000306549 SPATA31A3Q5VYP0 1347 aa9.54□□□□□ -0.88
PCDHB1-201ENST00000306549 MRE11P49959 708 aa9.54□□□□□ -0.88
PCDHB1-201ENST00000306549 ATP8B2P98198 1209 aa9.54□□□□□ -0.88
PCDHB1-201ENST00000306549 MCMDC2Q4G0Z9 681 aa9.54□□□□□ -0.88
PCDHB1-201ENST00000306549 C8orf76Q96K31 380 aa9.54□□□□□ -0.88
PCDHB1-201ENST00000306549 GBP3Q9H0R5 595 aa9.54□□□□□ -0.88
PCDHB1-201ENST00000306549 CACNA2D4Q7Z3S7 1137 aa9.54□□□□□ -0.88
PCDHB1-201ENST00000306549 ARHGEF25Q86VW2 580 aa9.54□□□□□ -0.88
PCDHB1-201ENST00000306549 GOLIM4O00461 696 aa9.54□□□□□ -0.88
PCDHB1-201ENST00000306549 TCIRG1Q13488 830 aa9.54□□□□□ -0.88
PCDHB1-201ENST00000306549 KCNG1Q9UIX4 513 aa9.54□□□□□ -0.88
PCDHB1-201ENST00000306549 MYO9BQ13459 2157 aa9.54□□□□□ -0.88
PCDHB1-201ENST00000306549 METP08581 1390 aa9.54□□□□□ -0.88
PCDHB1-201ENST00000306549 MAGEB6P1A0A0J9YX57 407 aa9.53□□□□□ -0.88
PCDHB1-201ENST00000306549 ACTN2P35609 894 aa9.53□□□□□ -0.88
PCDHB1-201ENST00000306549 VTI1AQ96AJ9 217 aa9.53□□□□□ -0.88
PCDHB1-201ENST00000306549 CALML4Q96GE6 196 aa9.53□□□□□ -0.88
PCDHB1-201ENST00000306549 LZTS2Q9BRK4 669 aa9.53□□□□□ -0.88
PCDHB1-201ENST00000306549 PLEKHG2Q9H7P9 1386 aa9.53□□□□□ -0.88
PCDHB1-201ENST00000306549 ARHGAP29Q52LW3 1261 aa9.53□□□□□ -0.88
PCDHB1-201ENST00000306549 FMNL3Q8IVF7 1028 aa9.53□□□□□ -0.88
PCDHB1-201ENST00000306549 TMEM67Q5HYA8 995 aa9.53□□□□□ -0.88
PCDHB1-201ENST00000306549 LMBR1LQ6UX01 489 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms