RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 IFNL2Q8IZJ0 200 aa14.62□□□□□ -0.07
COL3A1-201ENST00000304636 SELENOOQ9BVL4 669 aa14.62□□□□□ -0.07
COL3A1-201ENST00000304636 CBX8Q9HC52 389 aa14.62□□□□□ -0.07
COL3A1-201ENST00000304636 PAG1Q9NWQ8 432 aa14.62□□□□□ -0.07
COL3A1-201ENST00000304636 IMPACTQ9P2X3 320 aa14.62□□□□□ -0.07
COL3A1-201ENST00000304636 IL15P40933 162 aaPredicted RBP14.62□□□□□ -0.07
COL3A1-201ENST00000304636 KIAA0753Q2KHM9 967 aa14.62□□□□□ -0.07
COL3A1-201ENST00000304636 CNGA4Q8IV77 575 aa14.62□□□□□ -0.07
COL3A1-201ENST00000304636 C10orf67Q8IYJ2 551 aa14.62□□□□□ -0.07
COL3A1-201ENST00000304636 TMEM63CQ9P1W3 806 aa14.62□□□□□ -0.07
COL3A1-201ENST00000304636 ELP1O95163 1332 aa14.62□□□□□ -0.07
COL3A1-201ENST00000304636 NUP153P49790 1475 aaKnown RBP14.62□□□□□ -0.07
COL3A1-201ENST00000304636 SHANK2Q9UPX8 1470 aa14.62□□□□□ -0.07
COL3A1-201ENST00000304636 RHOXF2BP0C7M4 288 aa14.62□□□□□ -0.07
COL3A1-201ENST00000304636 TCERG1LQ5VWI1 586 aa14.62□□□□□ -0.07
COL3A1-201ENST00000304636 KRBA2Q6ZNG9 492 aa14.62□□□□□ -0.07
COL3A1-201ENST00000304636 OTUD6BQ8N6M0 293 aa14.62□□□□□ -0.07
COL3A1-201ENST00000304636 PHACTR3Q96KR7 559 aa14.62□□□□□ -0.07
COL3A1-201ENST00000304636 RHOXF2Q9BQY4 288 aa14.62□□□□□ -0.07
COL3A1-201ENST00000304636 PA2G4Q9UQ80 394 aaKnown RBP14.62□□□□□ -0.07
COL3A1-201ENST00000304636 PPIP5K1Q6PFW1 1433 aa14.62□□□□□ -0.07
COL3A1-201ENST00000304636 POGZQ7Z3K3 1410 aa14.62□□□□□ -0.07
COL3A1-201ENST00000304636 TRIM75PA6NK02 468 aa14.61□□□□□ -0.07
COL3A1-201ENST00000304636 RBM5P52756 815 aaKnown RBP eCLIP14.61□□□□□ -0.07
COL3A1-201ENST00000304636 OTUD7AQ8TE49 926 aaPredicted RBP14.61□□□□□ -0.07
COL3A1-201ENST00000304636 DHX58Q96C10 678 aa14.61□□□□□ -0.07
COL3A1-201ENST00000304636 SNX14Q9Y5W7 946 aa14.61□□□□□ -0.07
COL3A1-201ENST00000304636 MPHOSPH10O00566 681 aaKnown RBP14.61□□□□□ -0.07
COL3A1-201ENST00000304636 RPS6KB1P23443 525 aa14.61□□□□□ -0.07
COL3A1-201ENST00000304636 UBE4AQ14139 1066 aa14.61□□□□□ -0.07
COL3A1-201ENST00000304636 NUTM2AQ8IVF1 878 aaPredicted RBP14.61□□□□□ -0.07
COL3A1-201ENST00000304636 C17orf53Q8N3J3 647 aaPredicted RBP14.61□□□□□ -0.07
COL3A1-201ENST00000304636 LINS1Q8NG48 757 aa14.61□□□□□ -0.07
COL3A1-201ENST00000304636 URB2Q14146 1524 aaKnown RBP14.61□□□□□ -0.07
COL3A1-201ENST00000304636 TSPY2A6NKD2 308 aa14.61□□□□□ -0.07
COL3A1-201ENST00000304636 BRD1O95696 1058 aa14.61□□□□□ -0.07
COL3A1-201ENST00000304636 MEX3CQ5U5Q3 659 aaKnown RBP14.61□□□□□ -0.07
COL3A1-201ENST00000304636 HOOK3Q86VS8 718 aa14.61□□□□□ -0.07
COL3A1-201ENST00000304636 GUCA1BQ9UMX6 200 aa14.61□□□□□ -0.07
COL3A1-201ENST00000304636 CTTNBP2Q8WZ74 1663 aa14.61□□□□□ -0.07
COL3A1-201ENST00000304636 AKR1B15C9JRZ8 316 aaPredicted RBP14.61□□□□□ -0.07
COL3A1-201ENST00000304636 CCDC172P0C7W6 258 aa14.61□□□□□ -0.07
COL3A1-201ENST00000304636 CCDC121Q6ZUS5 278 aa14.61□□□□□ -0.07
COL3A1-201ENST00000304636 FAM76AQ8TAV0 307 aa14.61□□□□□ -0.07
COL3A1-201ENST00000304636 TEX13AQ9BXU3 409 aaPredicted RBP14.61□□□□□ -0.07
COL3A1-201ENST00000304636 PHACTR2O75167 634 aa14.6□□□□□ -0.07
COL3A1-201ENST00000304636 GADD45BO75293 160 aaPredicted RBP14.6□□□□□ -0.07
COL3A1-201ENST00000304636 MTHFSDQ2M296 383 aaKnown RBP14.6□□□□□ -0.07
COL3A1-201ENST00000304636 ESR2Q92731 530 aa14.6□□□□□ -0.07
COL3A1-201ENST00000304636 DRC1Q96MC2 740 aa14.6□□□□□ -0.07
COL3A1-201ENST00000304636 RNF113AO15541 343 aaKnown RBP14.6□□□□□ -0.07
COL3A1-201ENST00000304636 CCDC42Q96M95 316 aa14.6□□□□□ -0.07
COL3A1-201ENST00000304636 ATP2C2O75185 946 aa14.6□□□□□ -0.07
COL3A1-201ENST00000304636 ARFGAP2Q8N6H7 521 aa14.6□□□□□ -0.07
COL3A1-201ENST00000304636 LLPHQ9BRT6 129 aaKnown RBP14.6□□□□□ -0.07
COL3A1-201ENST00000304636 A0A1B0GUL7 405 aa14.6□□□□□ -0.07
COL3A1-201ENST00000304636 A0A1B0GVL5 298 aa14.6□□□□□ -0.07
COL3A1-201ENST00000304636 IRX3P78415 501 aaPredicted RBP14.6□□□□□ -0.07
COL3A1-201ENST00000304636 ELF2Q15723 593 aa14.6□□□□□ -0.07
COL3A1-201ENST00000304636 MSL1Q68DK7 614 aa14.6□□□□□ -0.07
COL3A1-201ENST00000304636 CCDC129Q6ZRS4 1044 aa14.6□□□□□ -0.07
COL3A1-201ENST00000304636 ANKS4BQ8N8V4 417 aa14.6□□□□□ -0.07
COL3A1-201ENST00000304636 FSD2A1L4K1 749 aa14.59□□□□□ -0.07
COL3A1-201ENST00000304636 CPA1P15085 419 aa14.59□□□□□ -0.07
COL3A1-201ENST00000304636 BICDL1Q6ZP65 573 aa14.59□□□□□ -0.07
COL3A1-201ENST00000304636 XAGE3Q8WTP9 111 aa14.59□□□□□ -0.07
COL3A1-201ENST00000304636 JARID2Q92833 1246 aaPredicted RBP14.59□□□□□ -0.07
COL3A1-201ENST00000304636 KRT24Q2M2I5 525 aa14.59□□□□□ -0.07
COL3A1-201ENST00000304636 STXBP4Q6ZWJ1 553 aa14.59□□□□□ -0.07
COL3A1-201ENST00000304636 DDX12PQ92771 950 aa14.59□□□□□ -0.07
COL3A1-201ENST00000304636 UBXN1Q04323 297 aa14.59□□□□□ -0.07
COL3A1-201ENST00000304636 SPAG5Q96R06 1193 aa14.59□□□□□ -0.07
COL3A1-201ENST00000304636 DMRT2Q9Y5R5 561 aa14.59□□□□□ -0.07
COL3A1-201ENST00000304636 CAPZA3Q96KX2 299 aa14.59□□□□□ -0.07
COL3A1-201ENST00000304636 STMN4Q9H169 189 aaPredicted RBP14.59□□□□□ -0.07
COL3A1-201ENST00000304636 BCL2L12Q9HB09 334 aa14.59□□□□□ -0.07
COL3A1-201ENST00000304636 VAV2P52735 878 aa14.58□□□□□ -0.07
COL3A1-201ENST00000304636 KRI1Q8N9T8 703 aaKnown RBP14.58□□□□□ -0.07
COL3A1-201ENST00000304636 SYCP2Q9BX26 1530 aa14.58□□□□□ -0.07
COL3A1-201ENST00000304636 A0A1W2PP64 1363 aa14.58□□□□□ -0.07
COL3A1-201ENST00000304636 IFIT1BQ5T764 474 aaKnown RBP14.58□□□□□ -0.08
COL3A1-201ENST00000304636 CUL5Q93034 780 aa14.58□□□□□ -0.08
COL3A1-201ENST00000304636 SGSM2O43147 1006 aa14.58□□□□□ -0.08
COL3A1-201ENST00000304636 AKAP4Q5JQC9 854 aa14.58□□□□□ -0.08
COL3A1-201ENST00000304636 LMBR1LQ6UX01 489 aa14.58□□□□□ -0.08
COL3A1-201ENST00000304636 COPS6Q7L5N1 327 aa14.58□□□□□ -0.08
COL3A1-201ENST00000304636 RASAL2Q9UJF2 1139 aa14.58□□□□□ -0.08
COL3A1-201ENST00000304636 LEO1Q8WVC0 666 aaPredicted RBP14.58□□□□□ -0.08
COL3A1-201ENST00000304636 LUC7L2Q9Y383 392 aaKnown RBP14.58□□□□□ -0.08
COL3A1-201ENST00000304636 BICDL2A1A5D9 508 aa14.58□□□□□ -0.08
COL3A1-201ENST00000304636 TRIM35Q9UPQ4 493 aa14.58□□□□□ -0.08
COL3A1-201ENST00000304636 DNMT1P26358 1616 aaKnown RBP14.57□□□□□ -0.08
COL3A1-201ENST00000304636 PLCH2O75038 1416 aa14.57□□□□□ -0.08
COL3A1-201ENST00000304636 MACROD2A1Z1Q3 448 aa14.57□□□□□ -0.08
COL3A1-201ENST00000304636 SLC27A2O14975 620 aa14.57□□□□□ -0.08
COL3A1-201ENST00000304636 ATP2B3Q16720 1220 aa14.57□□□□□ -0.08
COL3A1-201ENST00000304636 LMBR1Q8WVP7 490 aa14.57□□□□□ -0.08
COL3A1-201ENST00000304636 KIF24Q5T7B8 1368 aa14.57□□□□□ -0.08
COL3A1-201ENST00000304636 ATP10BO94823 1461 aa14.57□□□□□ -0.08
COL3A1-201ENST00000304636 GPTP24298 496 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms