RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 ASIC1P78348 528 aa16.06■□□□□ 0.16
HIPK3-201ENST00000303296 DNAI1Q9UI46 699 aa16.06■□□□□ 0.16
HIPK3-201ENST00000303296 CCDC102BQ68D86 513 aa16.06■□□□□ 0.16
HIPK3-201ENST00000303296 ANO3Q9BYT9 981 aa16.06■□□□□ 0.16
HIPK3-201ENST00000303296 GNAT3A8MTJ3 354 aa16.06■□□□□ 0.16
HIPK3-201ENST00000303296 GLRX3O76003 335 aaKnown RBP16.06■□□□□ 0.16
HIPK3-201ENST00000303296 MX2P20592 715 aa16.06■□□□□ 0.16
HIPK3-201ENST00000303296 GBP6Q6ZN66 633 aa16.06■□□□□ 0.16
HIPK3-201ENST00000303296 GOLGA1Q92805 767 aa16.06■□□□□ 0.16
HIPK3-201ENST00000303296 RBM27Q9P2N5 1060 aaKnown RBP16.06■□□□□ 0.16
HIPK3-201ENST00000303296 RHOXF2BP0C7M4 288 aa16.06■□□□□ 0.16
HIPK3-201ENST00000303296 RHOXF2Q9BQY4 288 aa16.06■□□□□ 0.16
HIPK3-201ENST00000303296 TSTA3Q13630 321 aaPredicted RBP16.05■□□□□ 0.16
HIPK3-201ENST00000303296 RAPGEF1Q13905 1077 aa16.05■□□□□ 0.16
HIPK3-201ENST00000303296 BACH1O14867 736 aa16.05■□□□□ 0.16
HIPK3-201ENST00000303296 AFAP1L2Q8N4X5 818 aa16.05■□□□□ 0.16
HIPK3-201ENST00000303296 TDRD9Q8NDG6 1382 aaKnown RBP16.05■□□□□ 0.16
HIPK3-201ENST00000303296 SYKP43405 635 aa16.05■□□□□ 0.16
HIPK3-201ENST00000303296 RNASE9P60153 205 aaKnown RBP16.05■□□□□ 0.16
HIPK3-201ENST00000303296 C10orf67Q8IYJ2 551 aa16.05■□□□□ 0.16
HIPK3-201ENST00000303296 IL1RL1Q01638 556 aa16.05■□□□□ 0.16
HIPK3-201ENST00000303296 LEO1Q8WVC0 666 aaPredicted RBP16.05■□□□□ 0.16
HIPK3-201ENST00000303296 IRAK4Q9NWZ3 460 aa16.05■□□□□ 0.16
HIPK3-201ENST00000303296 MAFGO15525 162 aa16.05■□□□□ 0.16
HIPK3-201ENST00000303296 ANKRD24Q8TF21 1146 aa16.05■□□□□ 0.16
HIPK3-201ENST00000303296 LMBR1Q8WVP7 490 aa16.05■□□□□ 0.16
HIPK3-201ENST00000303296 C6orf50Q9HD87 102 aa16.05■□□□□ 0.16
HIPK3-201ENST00000303296 FAM170AA1A519 330 aa16.05■□□□□ 0.16
HIPK3-201ENST00000303296 GBP1P32455 592 aa16.05■□□□□ 0.16
HIPK3-201ENST00000303296 MVPQ14764 893 aaKnown RBP16.05■□□□□ 0.16
HIPK3-201ENST00000303296 CFAP70Q5T0N1 1121 aa16.05■□□□□ 0.16
HIPK3-201ENST00000303296 MTRF1LQ9UGC7 380 aaKnown RBP16.04■□□□□ 0.16
HIPK3-201ENST00000303296 BUB1BO60566 1050 aaPredicted RBP16.04■□□□□ 0.16
HIPK3-201ENST00000303296 CCT6AP40227 531 aaKnown RBP16.04■□□□□ 0.16
HIPK3-201ENST00000303296 KARSQ15046 597 aaKnown RBP16.04■□□□□ 0.16
HIPK3-201ENST00000303296 EBAG9O00559 213 aa16.04■□□□□ 0.16
HIPK3-201ENST00000303296 ST5P78524 1137 aa16.04■□□□□ 0.16
HIPK3-201ENST00000303296 USHBP1Q8N6Y0 703 aa16.04■□□□□ 0.16
HIPK3-201ENST00000303296 ORC3Q9UBD5 711 aaPredicted RBP16.04■□□□□ 0.16
HIPK3-201ENST00000303296 CCDC171Q6TFL3 1326 aa16.04■□□□□ 0.16
HIPK3-201ENST00000303296 IRX3P78415 501 aaPredicted RBP16.04■□□□□ 0.16
HIPK3-201ENST00000303296 ZNF408Q9H9D4 720 aa16.04■□□□□ 0.16
HIPK3-201ENST00000303296 NKIRAS1Q9NYS0 192 aa16.04■□□□□ 0.16
HIPK3-201ENST00000303296 FYB2Q5VWT5 728 aa16.04■□□□□ 0.16
HIPK3-201ENST00000303296 NEK1Q96PY6 1258 aa16.04■□□□□ 0.16
HIPK3-201ENST00000303296 MX1P20591 662 aa16.04■□□□□ 0.16
HIPK3-201ENST00000303296 SLC8A3P57103 927 aa16.04■□□□□ 0.16
HIPK3-201ENST00000303296 SPATA17Q96L03 361 aa16.04■□□□□ 0.16
HIPK3-201ENST00000303296 BZW2Q9Y6E2 419 aaKnown RBP16.04■□□□□ 0.16
HIPK3-201ENST00000303296 NGLY1Q96IV0 654 aa16.03■□□□□ 0.16
HIPK3-201ENST00000303296 PLIN2Q99541 437 aa16.03■□□□□ 0.16
HIPK3-201ENST00000303296 PYM1Q9BRP8 204 aaKnown RBP16.03■□□□□ 0.16
HIPK3-201ENST00000303296 GUCA1BQ9UMX6 200 aa16.03■□□□□ 0.16
HIPK3-201ENST00000303296 SPECC1L-ADORA2AF8WAN1 911 aa16.03■□□□□ 0.16
HIPK3-201ENST00000303296 CETN3O15182 167 aa16.03■□□□□ 0.16
HIPK3-201ENST00000303296 ZNF165P49910 485 aa16.03■□□□□ 0.16
HIPK3-201ENST00000303296 OGFOD1Q8N543 542 aa16.03■□□□□ 0.16
HIPK3-201ENST00000303296 FHOD3Q2V2M9 1422 aa16.03■□□□□ 0.16
HIPK3-201ENST00000303296 NEMFO60524 1076 aa16.03■□□□□ 0.16
HIPK3-201ENST00000303296 RPS6KA2Q15349 733 aa16.03■□□□□ 0.16
HIPK3-201ENST00000303296 RUFY3Q7L099 469 aa16.03■□□□□ 0.16
HIPK3-201ENST00000303296 SPDYE3A6NKU9 549 aa16.03■□□□□ 0.16
HIPK3-201ENST00000303296 CSPG5O95196 566 aa16.03■□□□□ 0.16
HIPK3-201ENST00000303296 PDIA4P13667 645 aaKnown RBP16.03■□□□□ 0.16
HIPK3-201ENST00000303296 ATICP31939 592 aa16.03■□□□□ 0.16
HIPK3-201ENST00000303296 NEK11Q8NG66 645 aa16.03■□□□□ 0.16
HIPK3-201ENST00000303296 RABEP2Q9H5N1 569 aa16.03■□□□□ 0.16
HIPK3-201ENST00000303296 ABL1P00519 1130 aa16.02■□□□□ 0.16
HIPK3-201ENST00000303296 NAPAP54920 295 aa16.02■□□□□ 0.16
HIPK3-201ENST00000303296 CABP1Q9NZU7 370 aa16.02■□□□□ 0.16
HIPK3-201ENST00000303296 PPFIA1Q13136 1202 aa16.02■□□□□ 0.16
HIPK3-201ENST00000303296 PLCB4Q15147 1175 aa16.02■□□□□ 0.16
HIPK3-201ENST00000303296 SEL1L2Q5TEA6 688 aa16.02■□□□□ 0.16
HIPK3-201ENST00000303296 ACRBPQ8NEB7 543 aa16.02■□□□□ 0.16
HIPK3-201ENST00000303296 JARID2Q92833 1246 aaPredicted RBP16.02■□□□□ 0.16
HIPK3-201ENST00000303296 MCUR1Q96AQ8 359 aa16.02■□□□□ 0.16
HIPK3-201ENST00000303296 SH2B1Q9NRF2 756 aaPredicted RBP16.02■□□□□ 0.16
HIPK3-201ENST00000303296 IQSEC3Q9UPP2 1182 aaPredicted RBP16.02■□□□□ 0.16
HIPK3-201ENST00000303296 SOGA1O94964 1423 aa16.02■□□□□ 0.15
HIPK3-201ENST00000303296 STX10O60499 249 aa16.02■□□□□ 0.15
HIPK3-201ENST00000303296 LPXNO60711 386 aa16.02■□□□□ 0.15
HIPK3-201ENST00000303296 GIMAP6Q6P9H5 292 aa16.02■□□□□ 0.15
HIPK3-201ENST00000303296 KRT222Q8N1A0 295 aa16.02■□□□□ 0.15
HIPK3-201ENST00000303296 SKA2Q8WVK7 121 aaPredicted RBP16.02■□□□□ 0.15
HIPK3-201ENST00000303296 UBXN1Q04323 297 aa16.01■□□□□ 0.15
HIPK3-201ENST00000303296 FOXD4Q12950 439 aaPredicted RBP16.01■□□□□ 0.15
HIPK3-201ENST00000303296 BIRC3Q13489 604 aa16.01■□□□□ 0.15
HIPK3-201ENST00000303296 NBPF7P0C2Y1 421 aaPredicted RBP16.01■□□□□ 0.15
HIPK3-201ENST00000303296 HDAC9Q9UKV0 1011 aa16.01■□□□□ 0.15
HIPK3-201ENST00000303296 CRNKL1Q9BZJ0 848 aaKnown RBP16.01■□□□□ 0.15
HIPK3-201ENST00000303296 MARCKSP29966 332 aaPredicted RBP16.01■□□□□ 0.15
HIPK3-201ENST00000303296 RILPQ96NA2 401 aa16.01■□□□□ 0.15
HIPK3-201ENST00000303296 RBBP5Q15291 538 aaKnown RBP16.01■□□□□ 0.15
HIPK3-201ENST00000303296 CCDC62Q6P9F0 684 aa16.01■□□□□ 0.15
HIPK3-201ENST00000303296 VCXQ9H320 206 aa16.01■□□□□ 0.15
HIPK3-201ENST00000303296 LIMCH1Q9UPQ0 1083 aa16.01■□□□□ 0.15
HIPK3-201ENST00000303296 STK10O94804 968 aaKnown RBP16.01■□□□□ 0.15
HIPK3-201ENST00000303296 CALCOCO2Q13137 446 aa16.01■□□□□ 0.15
HIPK3-201ENST00000303296 NSMCE1Q8WV22 266 aa16.01■□□□□ 0.15
HIPK3-201ENST00000303296 LMNTD2Q8IXW0 634 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms