RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 MTMR7Q9Y216 660 aa9.72□□□□□ -0.85
SNRPD1-201ENST00000300413 CDHR2Q9BYE9 1310 aa9.72□□□□□ -0.85
SNRPD1-201ENST00000300413 TRIM28Q13263 835 aaKnown RBP9.72□□□□□ -0.85
SNRPD1-201ENST00000300413 NLRP10Q86W26 655 aa9.72□□□□□ -0.85
SNRPD1-201ENST00000300413 KBTBD3Q8NAB2 608 aa9.72□□□□□ -0.85
SNRPD1-201ENST00000300413 IBTKQ9P2D0 1353 aaPredicted RBP9.72□□□□□ -0.85
SNRPD1-201ENST00000300413 GOLGA8AA7E2F4 631 aa9.72□□□□□ -0.85
SNRPD1-201ENST00000300413 GOLGA8BA8MQT2 603 aa9.72□□□□□ -0.85
SNRPD1-201ENST00000300413 KINO60870 393 aaKnown RBP9.72□□□□□ -0.85
SNRPD1-201ENST00000300413 EIF6P56537 245 aaKnown RBP9.72□□□□□ -0.85
SNRPD1-201ENST00000300413 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.71□□□□□ -0.85
SNRPD1-201ENST00000300413 IGSF3O75054 1194 aa9.71□□□□□ -0.85
SNRPD1-201ENST00000300413 TMEM67Q5HYA8 995 aa9.71□□□□□ -0.85
SNRPD1-201ENST00000300413 FAM13BQ9NYF5 915 aa9.71□□□□□ -0.85
SNRPD1-201ENST00000300413 KDM2BQ8NHM5 1336 aa9.71□□□□□ -0.85
SNRPD1-201ENST00000300413 RTL9Q8NET4 1388 aa9.71□□□□□ -0.85
SNRPD1-201ENST00000300413 RBM8AQ9Y5S9 174 aaKnown RBP9.71□□□□□ -0.85
SNRPD1-201ENST00000300413 CEMIPQ8WUJ3 1361 aa9.71□□□□□ -0.85
SNRPD1-201ENST00000300413 NMIQ13287 307 aaPredicted RBP9.71□□□□□ -0.86
SNRPD1-201ENST00000300413 TSR1Q2NL82 804 aaKnown RBP9.71□□□□□ -0.86
SNRPD1-201ENST00000300413 PNMA6EA0A0J9YXQ4 647 aa9.71□□□□□ -0.86
SNRPD1-201ENST00000300413 SERPINB2P05120 415 aa9.71□□□□□ -0.86
SNRPD1-201ENST00000300413 CYP19A1P11511 503 aaPredicted RBP9.71□□□□□ -0.86
SNRPD1-201ENST00000300413 CHMLP26374 656 aa9.71□□□□□ -0.86
SNRPD1-201ENST00000300413 NT5C2P49902 561 aa9.71□□□□□ -0.86
SNRPD1-201ENST00000300413 SSRP1Q08945 709 aaKnown RBP9.71□□□□□ -0.86
SNRPD1-201ENST00000300413 STK3Q13188 491 aa9.71□□□□□ -0.86
SNRPD1-201ENST00000300413 SAMD1Q6SPF0 538 aaPredicted RBP9.71□□□□□ -0.86
SNRPD1-201ENST00000300413 CUL5Q93034 780 aa9.71□□□□□ -0.86
SNRPD1-201ENST00000300413 GZF1Q9H116 711 aaPredicted RBP9.71□□□□□ -0.86
SNRPD1-201ENST00000300413 SH2D4AQ9H788 454 aa9.71□□□□□ -0.86
SNRPD1-201ENST00000300413 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.71□□□□□ -0.86
SNRPD1-201ENST00000300413 COL15A1P39059 1388 aa9.71□□□□□ -0.86
SNRPD1-201ENST00000300413 XDHP47989 1333 aa9.7□□□□□ -0.86
SNRPD1-201ENST00000300413 C2CD5Q86YS7 1000 aa9.7□□□□□ -0.86
SNRPD1-201ENST00000300413 HELBQ8NG08 1087 aaPredicted RBP9.7□□□□□ -0.86
SNRPD1-201ENST00000300413 WTAPQ15007 396 aa9.7□□□□□ -0.86
SNRPD1-201ENST00000300413 TNIP1Q15025 636 aa9.7□□□□□ -0.86
SNRPD1-201ENST00000300413 NIM1KQ8IY84 436 aa9.7□□□□□ -0.86
SNRPD1-201ENST00000300413 DBNDD2Q9BQY9 259 aa9.7□□□□□ -0.86
SNRPD1-201ENST00000300413 H7C1W4 665 aa9.7□□□□□ -0.86
SNRPD1-201ENST00000300413 PROSER3Q2NL68 480 aa9.7□□□□□ -0.86
SNRPD1-201ENST00000300413 OLFM4Q6UX06 510 aa9.7□□□□□ -0.86
SNRPD1-201ENST00000300413 MAGEB6Q8N7X4 407 aa9.7□□□□□ -0.86
SNRPD1-201ENST00000300413 ZNF142P52746 1687 aaPredicted RBP9.7□□□□□ -0.86
SNRPD1-201ENST00000300413 RGL2O15211 777 aa9.7□□□□□ -0.86
SNRPD1-201ENST00000300413 SDF4Q9BRK5 362 aa9.7□□□□□ -0.86
SNRPD1-201ENST00000300413 PXDNLA1KZ92 1463 aa9.69□□□□□ -0.86
SNRPD1-201ENST00000300413 CCDC96Q2M329 555 aa9.69□□□□□ -0.86
SNRPD1-201ENST00000300413 CARMIL3Q8ND23 1372 aa9.69□□□□□ -0.86
SNRPD1-201ENST00000300413 TSPY3P0CV98 308 aa9.69□□□□□ -0.86
SNRPD1-201ENST00000300413 TSPY8P0CW00 308 aa9.69□□□□□ -0.86
SNRPD1-201ENST00000300413 MTX1Q13505 466 aa9.69□□□□□ -0.86
SNRPD1-201ENST00000300413 LARGE2Q8N3Y3 721 aa9.69□□□□□ -0.86
SNRPD1-201ENST00000300413 SPATA5Q8NB90 893 aa9.69□□□□□ -0.86
SNRPD1-201ENST00000300413 C8orf76Q96K31 380 aa9.69□□□□□ -0.86
SNRPD1-201ENST00000300413 MPHOSPH6Q99547 160 aaKnown RBP9.69□□□□□ -0.86
SNRPD1-201ENST00000300413 FEZ1Q99689 392 aa9.69□□□□□ -0.86
SNRPD1-201ENST00000300413 RAB34Q9BZG1 259 aa9.69□□□□□ -0.86
SNRPD1-201ENST00000300413 SCAND2PQ9GZW5 306 aaPredicted RBP9.69□□□□□ -0.86
SNRPD1-201ENST00000300413 DACH1Q9UI36 760 aa9.69□□□□□ -0.86
SNRPD1-201ENST00000300413 RGS12O14924 1447 aa9.69□□□□□ -0.86
SNRPD1-201ENST00000300413 IQSEC2Q5JU85 1478 aa9.69□□□□□ -0.86
SNRPD1-201ENST00000300413 DHX8Q14562 1220 aaKnown RBP9.69□□□□□ -0.86
SNRPD1-201ENST00000300413 UPF3BQ9BZI7 483 aaKnown RBP9.69□□□□□ -0.86
SNRPD1-201ENST00000300413 NPR1P16066 1061 aa9.68□□□□□ -0.86
SNRPD1-201ENST00000300413 TIMM10P62072 90 aa9.68□□□□□ -0.86
SNRPD1-201ENST00000300413 SNX21Q969T3 373 aa9.68□□□□□ -0.86
SNRPD1-201ENST00000300413 PYM1Q9BRP8 204 aaKnown RBP9.68□□□□□ -0.86
SNRPD1-201ENST00000300413 PDE8BO95263 885 aa9.68□□□□□ -0.86
SNRPD1-201ENST00000300413 BMP15O95972 392 aa9.68□□□□□ -0.86
SNRPD1-201ENST00000300413 IARSP41252 1262 aaKnown RBP9.68□□□□□ -0.86
SNRPD1-201ENST00000300413 METAP2P50579 478 aaKnown RBP eCLIP9.68□□□□□ -0.86
SNRPD1-201ENST00000300413 CCDC148Q8NFR7 591 aa9.68□□□□□ -0.86
SNRPD1-201ENST00000300413 CNTNAP4Q9C0A0 1308 aa9.68□□□□□ -0.86
SNRPD1-201ENST00000300413 FMN2Q9NZ56 1722 aa9.68□□□□□ -0.86
SNRPD1-201ENST00000300413 FOSBP53539 338 aa9.68□□□□□ -0.86
SNRPD1-201ENST00000300413 PPP2R5BQ15173 497 aa9.68□□□□□ -0.86
SNRPD1-201ENST00000300413 FOXD4L6Q3SYB3 417 aaPredicted RBP9.68□□□□□ -0.86
SNRPD1-201ENST00000300413 FOXD4L3Q6VB84 417 aaPredicted RBP9.68□□□□□ -0.86
SNRPD1-201ENST00000300413 STAP2Q9UGK3 403 aa9.68□□□□□ -0.86
SNRPD1-201ENST00000300413 TTLL12Q14166 644 aaPredicted RBP9.68□□□□□ -0.86
SNRPD1-201ENST00000300413 TSHZ3Q63HK5 1081 aa9.68□□□□□ -0.86
SNRPD1-201ENST00000300413 STK11IPQ8N1F8 1099 aa9.68□□□□□ -0.86
SNRPD1-201ENST00000300413 BMP2KQ9NSY1 1161 aaPredicted RBP9.67□□□□□ -0.86
SNRPD1-201ENST00000300413 ZBTB43O43298 467 aa9.67□□□□□ -0.86
SNRPD1-201ENST00000300413 IFIT1BQ5T764 474 aaKnown RBP9.67□□□□□ -0.86
SNRPD1-201ENST00000300413 CCDC83Q8IWF9 413 aa9.67□□□□□ -0.86
SNRPD1-201ENST00000300413 TEX11Q8IYF3 940 aa9.67□□□□□ -0.86
SNRPD1-201ENST00000300413 C16orf71Q8IYS4 520 aaPredicted RBP9.67□□□□□ -0.86
SNRPD1-201ENST00000300413 ZNF594Q96JF6 807 aaPredicted RBP9.67□□□□□ -0.86
SNRPD1-201ENST00000300413 TMEM87BQ96K49 555 aa9.67□□□□□ -0.86
SNRPD1-201ENST00000300413 OSBPL3Q9H4L5 887 aa9.67□□□□□ -0.86
SNRPD1-201ENST00000300413 RIMBP2O15034 1052 aa9.67□□□□□ -0.86
SNRPD1-201ENST00000300413 PCP11498 1178 aaKnown RBP9.67□□□□□ -0.86
SNRPD1-201ENST00000300413 TXNRD1Q16881 649 aa9.67□□□□□ -0.86
SNRPD1-201ENST00000300413 CCDC125Q86Z20 511 aa9.67□□□□□ -0.86
SNRPD1-201ENST00000300413 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.67□□□□□ -0.86
SNRPD1-201ENST00000300413 ISCA1Q9BUE6 129 aa9.67□□□□□ -0.86
SNRPD1-201ENST00000300413 IQSEC3Q9UPP2 1182 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms